Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1DFF
DownloadVisualize
BU of 1dff by Molmil
PEPTIDE DEFORMYLASE
Descriptor: PEPTIDE DEFORMYLASE, ZINC ION
Authors:Chan, M.K, Gong, W, Rajagopalan, P.T.R, Hao, B, Tsai, C.M, Pei, D.
Deposit date:1997-08-19
Release date:1998-09-02
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Crystal structure of the Escherichia coli peptide deformylase.
Biochemistry, 36, 1997
6O59
DownloadVisualize
BU of 6o59 by Molmil
Crystal structure of the N-terminal domain of the A subunit of the Bacillus megaterium spore germinant receptor GerK3
Descriptor: Germination protein
Authors:Li, Y, Hao, B.
Deposit date:2019-03-01
Release date:2019-05-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Structural and functional analyses of the N-terminal domain of the A subunit of aBacillus megateriumspore germinant receptor.
Proc.Natl.Acad.Sci.USA, 116, 2019
1KA4
DownloadVisualize
BU of 1ka4 by Molmil
Structure of Pyrococcus furiosus carboxypeptidase Nat-Pb
Descriptor: LEAD (II) ION, M32 carboxypeptidase
Authors:Arndt, J.W, Hao, B, Ramakrishnan, V, Cheng, T, Chan, S.I, Chan, M.K.
Deposit date:2001-10-31
Release date:2002-11-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal Structure of a Novel Carboxypeptidase from the Hyperthermophilic Archaeon Pyrococcus furiosus
Structure, 10, 2002
1K9X
DownloadVisualize
BU of 1k9x by Molmil
Structure of Pyrococcus furiosus carboxypeptidase Apo-Yb
Descriptor: M32 carboxypeptidase
Authors:Arndt, J.W, Hao, B, Ramakrishnan, V, Cheng, T, Chan, S.I, Chan, M.K.
Deposit date:2001-10-31
Release date:2002-11-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of a Novel Carboxypeptidase from the Hyperthermophilic Archaeon Pyrococcus furiosus
Structure, 10, 2002
1KA2
DownloadVisualize
BU of 1ka2 by Molmil
Structure of Pyrococcus furiosus Carboxypeptidase Apo-Mg
Descriptor: M32 carboxypeptidase, MAGNESIUM ION
Authors:Arndt, J.W, Hao, B, Ramakrishnan, V, Cheng, T, Chan, S.I, Chan, M.K.
Deposit date:2001-10-31
Release date:2002-11-06
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of a Novel Carboxypeptidase from the Hyperthermophilic Archaeon Pyrococcus furiosus
Structure, 10, 2002
7UR2
DownloadVisualize
BU of 7ur2 by Molmil
Crystal structure of the Sec14 domain of the RhoGEF Kalirin
Descriptor: Isoform 7 of Kalirin, SULFATE ION
Authors:Li, Y, Doukov, T.I, Hao, B.
Deposit date:2022-04-21
Release date:2023-01-18
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structure of the Sec14 domain of Kalirin reveals a distinct class of lipid-binding module in RhoGEFs.
Nat Commun, 14, 2023
4O8W
DownloadVisualize
BU of 4o8w by Molmil
Crystal Structure of the GerD spore germination protein
Descriptor: Spore germination protein
Authors:Li, Y, Jin, K, Ghosh, S, Devarakonda, P, Carlson, K, Davis, A, Stewart, K, Cammett, E, Rossi, P.P, Setlow, B, Lu, M, Setlow, P, Hao, B.
Deposit date:2013-12-30
Release date:2014-03-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.293 Å)
Cite:Structural and Functional Analysis of the GerD Spore Germination Protein of Bacillus Species.
J.Mol.Biol., 426, 2014
3N54
DownloadVisualize
BU of 3n54 by Molmil
Crystal Structure of the GerBC protein
Descriptor: CHLORIDE ION, SULFATE ION, Spore germination protein B3
Authors:Li, Y, Setlow, B, Setlow, P, Hao, B.
Deposit date:2010-05-24
Release date:2010-08-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of the GerBC Component of a Bacillus subtilis Spore Germinant Receptor.
J.Mol.Biol., 402, 2010
1XEO
DownloadVisualize
BU of 1xeo by Molmil
High Resolution Crystals Structure of Cobalt- Peptide Deformylase Bound To Formate
Descriptor: COBALT (II) ION, FORMIC ACID, Peptide deformylase
Authors:Jain, R, Hao, B, Liu, R.-P, Chan, M.K.
Deposit date:2004-09-10
Release date:2005-03-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structures of E. coli peptide deformylase bound to formate: insight into the preference for Fe2+ over Zn2+ as the active site metal
J.Am.Chem.Soc., 127, 2005
1XEM
DownloadVisualize
BU of 1xem by Molmil
High Resolution Crystal Structure of Escherichia coli Zinc- Peptide Deformylase bound to formate
Descriptor: FORMIC ACID, Peptide deformylase, ZINC ION
Authors:Jain, R, Hao, B, Liu, R.-P, Chan, M.K.
Deposit date:2004-09-10
Release date:2005-03-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structures of E. coli peptide deformylase bound to formate: insight into the preference for Fe2+ over Zn2+ as the active site metal
J.Am.Chem.Soc., 127, 2005
1XEN
DownloadVisualize
BU of 1xen by Molmil
High Resolution Crystal Structure of Escherichia coli Iron- Peptide Deformylase Bound To Formate
Descriptor: FE (III) ION, FORMIC ACID, Peptide deformylase
Authors:Jain, R, Hao, B, Liu, R.-P, Chan, M.K.
Deposit date:2004-09-10
Release date:2005-03-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structures of E. coli peptide deformylase bound to formate: insight into the preference for Fe2+ over Zn2+ as the active site metal
J.Am.Chem.Soc., 127, 2005
3L2O
DownloadVisualize
BU of 3l2o by Molmil
Structure-Based Mechanism of Dimerization-Dependent Ubiquitination by the SCFFbx4 Ubiquitin Ligase
Descriptor: F-box only protein 4, S-phase kinase-associated protein 1
Authors:Li, Y, Hao, B.
Deposit date:2009-12-15
Release date:2010-02-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of dimerization-dependent ubiquitination by the SCF(Fbx4) ubiquitin ligase.
J.Biol.Chem., 285, 2010
8F2E
DownloadVisualize
BU of 8f2e by Molmil
Crystal Structure of the CoV-Y domain of SARS-CoV-2 Nonstructural Protein 3
Descriptor: GLYCEROL, Papain-like protease nsp3
Authors:Li, Y, Shi, W, Hao, B.
Deposit date:2022-11-07
Release date:2023-03-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Crystal structure of the CoV-Y domain of SARS-CoV-2 nonstructural protein 3.
Sci Rep, 13, 2023
3CF4
DownloadVisualize
BU of 3cf4 by Molmil
Structure of the CODH component of the M. barkeri ACDS complex
Descriptor: ACETIC ACID, Acetyl-CoA decarboxylase/synthase alpha subunit, Acetyl-CoA decarboxylase/synthase epsilon subunit, ...
Authors:Gong, W, Hao, B, Wei, Z, Ferguson Jr, D.J, Tallant, T, Krzycki, J.A, Chan, M.K.
Deposit date:2008-03-01
Release date:2008-07-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the alpha2 epsilon2 Ni-dependent CO dehydrogenase component of the Methanosarcina barkeri acetyl-CoA decarboxylase/synthase complex
Proc.Natl.Acad.Sci.USA, 105, 2008
5V4B
DownloadVisualize
BU of 5v4b by Molmil
Crystal structure of the Skp1-FBXW7-DISC1 complex
Descriptor: DISC1 peptide, F-box/WD repeat-containing protein 7, IMIDAZOLE, ...
Authors:Li, Y, Baillie, G.S, Hao, B.
Deposit date:2017-03-08
Release date:2017-09-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:FBXW7 regulates DISC1 stability via the ubiquitin-proteosome system.
Mol. Psychiatry, 23, 2018
5VZT
DownloadVisualize
BU of 5vzt by Molmil
Crystal structure of the Skp1-FBXO31 complex
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, F-box only protein 31, PHOSPHATE ION, ...
Authors:Li, Y, Jin, K, Hao, B.
Deposit date:2017-05-29
Release date:2018-01-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of the phosphorylation-independent recognition of cyclin D1 by the SCFFBXO31 ubiquitin ligase.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5VZU
DownloadVisualize
BU of 5vzu by Molmil
Crystal structure of the Skp1-FBXO31-cyclin D1 complex
Descriptor: Cyclin D1, F-box only protein 31, PHOSPHATE ION, ...
Authors:Li, Y, Jin, K, Hao, B.
Deposit date:2017-05-29
Release date:2018-01-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of the phosphorylation-independent recognition of cyclin D1 by the SCFFBXO31 ubiquitin ligase.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
2M19
DownloadVisualize
BU of 2m19 by Molmil
Solution structure of the Haloferax volcanii HVO 2177 protein
Descriptor: Molybdopterin converting factor subunit 1
Authors:Li, Y, Maciejewski, M.W, Martin, J, Jin, K, Zhang, Y, Lu, M, Maupin-Furlow, J.A, Hao, B.
Deposit date:2012-11-21
Release date:2013-08-07
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Crystal structure of the ubiquitin-like small archaeal modifier protein 2 from Haloferax volcanii.
Protein Sci., 22, 2013
6BCD
DownloadVisualize
BU of 6bcd by Molmil
Crystal structure of Rev7-K44A/R124A/A135D in complex with Rev3-RBM2 (residues 1988-2014)
Descriptor: DNA polymerase zeta catalytic subunit, Mitotic spindle assembly checkpoint protein MAD2B
Authors:Rizzo, A.A, Hao, B, Li, Y, Korzhnev, D.M.
Deposit date:2017-10-20
Release date:2018-08-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Rev7 dimerization is important for assembly and function of the Rev1/Pol zeta translesion synthesis complex.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6BC8
DownloadVisualize
BU of 6bc8 by Molmil
Crystal structure of Rev7-R124A/Rev3-RBM2 (residues 1988-2014) complex
Descriptor: ACETATE ION, DNA polymerase zeta catalytic subunit, Mitotic spindle assembly checkpoint protein MAD2B, ...
Authors:Rizzo, A.A, Hao, B, Li, Y, Korzhnev, D.M.
Deposit date:2017-10-20
Release date:2018-08-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Rev7 dimerization is important for assembly and function of the Rev1/Pol zeta translesion synthesis complex.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6BI7
DownloadVisualize
BU of 6bi7 by Molmil
Crystal structure of Rev7-WT/Rev3 as a monomer under high-salt conditions
Descriptor: DNA polymerase zeta catalytic subunit, Mitotic spindle assembly checkpoint protein MAD2B
Authors:Rizzo, A.A, Korzhnev, D.M, Hao, B, Li, Y.
Deposit date:2017-11-01
Release date:2018-08-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Rev7 dimerization is important for assembly and function of the Rev1/Pol zeta translesion synthesis complex.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6WS5
DownloadVisualize
BU of 6ws5 by Molmil
Rational drug design of phenazopyridine derivatives as novel inhibitors of Rev1-CT
Descriptor: 3-[(Z)-(2,3-difluorophenyl)diazenyl]pyridine-2,6-diamine, DNA polymerase zeta catalytic subunit, DNA repair protein REV1, ...
Authors:McPherson, K.S, Korzhnev, D.M.
Deposit date:2020-04-30
Release date:2020-12-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.472 Å)
Cite:Structure-Based Drug Design of Phenazopyridine Derivatives as Inhibitors of Rev1 Interactions in Translesion Synthesis.
Chemmedchem, 16, 2021
6WS0
DownloadVisualize
BU of 6ws0 by Molmil
Rational drug design of phenazopyridine derivatives as novel inhibitors of Rev1-CT
Descriptor: DNA polymerase zeta catalytic subunit, DNA repair protein REV1, Mitotic spindle assembly checkpoint protein MAD2B
Authors:McPherson, K.S, Korzhnev, D.M.
Deposit date:2020-04-30
Release date:2020-12-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Structure-Based Drug Design of Phenazopyridine Derivatives as Inhibitors of Rev1 Interactions in Translesion Synthesis.
Chemmedchem, 16, 2021
3EZX
DownloadVisualize
BU of 3ezx by Molmil
Structure of Methanosarcina barkeri monomethylamine corrinoid protein
Descriptor: 5-HYDROXYBENZIMIDAZOLYLCOBAMIDE, MAGNESIUM ION, Monomethylamine corrinoid protein 1
Authors:Jain, R.
Deposit date:2008-10-23
Release date:2009-12-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Structure of Methanosarcina barkeri monomethylamine corrinoid protein
TO BE PUBLISHED
<12

 

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon