Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5JCQ
DownloadVisualize
BU of 5jcq by Molmil
Crystal structure of the FimH lectin domain from E.coli K12 in complex with methyl alpha-D-mannopyrannoside in spacegroup P21
分子名称: Protein FimH, SULFATE ION, methyl alpha-D-mannopyranoside
著者Jakob, R.P, Rabbani, S, Ernst, B, Maier, T.
登録日2016-04-15
公開日2017-05-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.602 Å)
主引用文献Crystal structure of the FimH lectin domain from E.coli K12 in complex with methyl alpha-D-mannopyrannoside in spacegroup P21
To Be Published
5JCR
DownloadVisualize
BU of 5jcr by Molmil
Crystal structure of the FimH lectin domain from E.coli K12 in complex with methyl alpha-D-mannopyrannoside in spacegroup P212121
分子名称: Protein FimH, methyl alpha-D-mannopyranoside
著者Jakob, R.P, Rabbani, S, Ernst, B, Maier, T.
登録日2016-04-15
公開日2017-05-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.701 Å)
主引用文献Crystal structure of the FimH lectin domain from E.coli K12 in complex with methyl alpha-D-mannopyrannoside in spacegroup P212121
To Be Published
4Z3I
DownloadVisualize
BU of 4z3i by Molmil
Crystal structure of the lectin domain of PapG from E. coli BI47 in spacegroup P21212
分子名称: PapG, lectin domain
著者Jakob, R.P, Navarra, G, Zihlmann, P, Stangier, K, Preston, R.C, Rabbani, S, Maier, T, Ernst, B.
登録日2015-03-31
公開日2016-04-13
実験手法X-RAY DIFFRACTION (1.739 Å)
主引用文献An unexpected way nature improves solvation entropy
To Be Published
4Z3G
DownloadVisualize
BU of 4z3g by Molmil
Crystal structure of the lectin domain of PapG from E. coli BI47 in complex with 4-methoxyphenyl beta-D-galabiose in space group P212121
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-methoxyphenol, PapG, ...
著者Jakob, R.P, Navarra, G, Zihlmann, P, Stangier, K, Preston, R.C, Rabbani, S, Maier, T, Ernst, B.
登録日2015-03-31
公開日2016-04-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献An unexpected way nature improves solvation entropy
To Be Published
4Z3H
DownloadVisualize
BU of 4z3h by Molmil
Crystal structure of the lectin domain of PapG from E. coli BI47 in complex with 4-methoxyphenyl beta-D-galabiose in space group P21
分子名称: 4-methoxyphenol, PapG, lectin domain, ...
著者Jakob, R.P, Navarra, G, Zihlmann, P, Stangier, K, Preston, R.C, Rabbani, S, Maier, T, Ernst, B.
登録日2015-03-31
公開日2016-04-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献An unexpected way nature improves solvation entropy
To Be Published
4Z3F
DownloadVisualize
BU of 4z3f by Molmil
Crystal structure of the lectin domain of PapG from E. coli BI47 in complex with SSEA4 in space group P21
分子名称: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, PapG, lectin domain, ...
著者Jakob, R.P, Navarra, G, Zihlmann, P, Stangier, K, Preston, R.C, Rabbani, S, Maier, T, Ernst, B.
登録日2015-03-31
公開日2016-04-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献An unexpected way nature improves solvation entropy
To Be Published
4Z3J
DownloadVisualize
BU of 4z3j by Molmil
Crystal structure of the lectin domain of PapG from E. coli BI47 in space group P1
分子名称: PapG, lectin domain
著者Jakob, R.P, Navarra, G, Zihlmann, P, Stangier, K, Preston, R.C, Rabbani, S, Maier, T, Ernst, B.
登録日2015-03-31
公開日2016-04-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献An unexpected way nature improves solvation entropy
To Be Published
6EYK
DownloadVisualize
BU of 6eyk by Molmil
E-selectin lectin, EGF-like and two SCR domains complexed with glycomimetic ligand NV355
分子名称: (2~{S})-3-cyclohexyl-2-[(2~{R},3~{S},4~{S},5~{R},6~{R})-2-(hydroxymethyl)-6-[(1~{R},2~{R},3~{S})-3-methyl-2-[(2~{R},3~{S},4~{R},5~{S},6~{R})-3,4,5-tris(oxidanyl)-6-(trifluoromethyl)oxan-2-yl]oxy-cyclohexyl]oxy-3,5-bis(oxidanyl)oxan-4-yl]oxy-propanoic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Jakob, R.P, Zihlmann, P, Preston, R.C, Varga, N, Ernst, B, Maier, T.
登録日2017-11-13
公開日2018-11-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献E-selectin lectin with different glycomimetic ligands
To Be Published
6EYJ
DownloadVisualize
BU of 6eyj by Molmil
E-selectin lectin, EGF-like and two SCR domains complexed with glycomimetic ligand NV354
分子名称: (2~{S})-3-cyclohexyl-2-[(2~{R},3~{S},4~{S},5~{R},6~{R})-2-(hydroxymethyl)-3,5-bis(oxidanyl)-6-[(1~{R},2~{R})-2-[(2~{R},3~{S},4~{R},5~{S},6~{R})-3,4,5-tris(oxidanyl)-6-(trifluoromethyl)oxan-2-yl]oxycyclohexyl]oxy-oxan-4-yl]oxy-propanoic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Jakob, R.P, Zihlmann, P, Preston, R.C, Varga, N, Ernst, B, Maier, T.
登録日2017-11-13
公開日2018-11-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献E-selectin lectin with different glycomimetic ligands
To Be Published
6EYI
DownloadVisualize
BU of 6eyi by Molmil
E-selectin lectin, EGF-like and two SCR domains complexed with glycomimetic ligand BW69669
分子名称: (2~{R})-3-cyclohexyl-2-[(2~{R},3~{S},4~{S},5~{R},6~{R})-2-(hydroxymethyl)-6-[(1~{R},2~{R})-2-[(2~{S},3~{S},4~{R},5~{S},6~{S})-6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl]oxycyclohexyl]oxy-3,5-bis(oxidanyl)oxan-4-yl]oxy-propanoic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Jakob, R.P, Zihlmann, P, Preston, R.C, Varga, N, Ernst, B, Maier, T.
登録日2017-11-13
公開日2018-11-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献E-selectin lectin with different glycomimetic ligands
To Be Published
7AYN
DownloadVisualize
BU of 7ayn by Molmil
Crystal structure of the lectin domain of the FimH variant Arg98Ala, in complex with Methyl 3-chloro-4-D-mannopyranosyloxy-3-biphenylcarboxylate
分子名称: 1,2-ETHANEDIOL, Type 1 fimbrin D-mannose specific adhesin, methyl 3-[3-chloranyl-4-[(2~{R},3~{S},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-phenyl]benzoate
著者Jakob, R.P, Tomasic, T, Rabbani, S, Reisner, A, Jakopin, Z, Maier, T, Ernst, B, Anderluh, M.
登録日2020-11-12
公開日2020-12-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Does targeting Arg98 of FimH lead to high affinity antagonists?
Eur.J.Med.Chem., 211, 2020
2N7B
DownloadVisualize
BU of 2n7b by Molmil
Solution structure of the human Siglec-8 lectin domain in complex with 6'sulfo sialyl Lewisx
分子名称: 3-aminopropan-1-ol, N-acetyl-alpha-neuraminic acid-(2-3)-6-O-sulfo-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose, Sialic acid-binding Ig-like lectin 8
著者Proepster, J.M, Yang, F, Rabbani, S, Ernst, B, Allain, F.H.-T, Schubert, M.
登録日2015-09-07
公開日2016-07-06
最終更新日2020-07-29
実験手法SOLUTION NMR
主引用文献Structural basis for sulfation-dependent self-glycan recognition by the human immune-inhibitory receptor Siglec-8.
Proc.Natl.Acad.Sci.USA, 113, 2016
2N7A
DownloadVisualize
BU of 2n7a by Molmil
Solution structure of the human Siglec-8 lectin domain
分子名称: Sialic acid-binding Ig-like lectin 8
著者Proepster, J.M, Yang, F, Rabbani, S, Ernst, B, Allain, F.H.-T, Schubert, M.
登録日2015-09-07
公開日2016-07-06
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structural basis for sulfation-dependent self-glycan recognition by the human immune-inhibitory receptor Siglec-8.
Proc.Natl.Acad.Sci.USA, 113, 2016
5L4W
DownloadVisualize
BU of 5l4w by Molmil
Crystal structure of FimH lectin domain in complex with 3-Fluoro-Heptylmannoside
分子名称: Protein FimH, heptyl 3-fluoro-alpha-D-mannopyranoside
著者Jakob, R.P, Zihlmann, P, Rabbani, S, Maier, T, Ernst, B.
登録日2016-05-26
公開日2017-06-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献High-Affinity Carbohydrate-Lectin Interactions: How Nature Makes it Possible
To Be Published
5L4X
DownloadVisualize
BU of 5l4x by Molmil
Crystal structure of FimH lectin domain in complex with 4-Deoxy-Heptylmannoside
分子名称: Protein FimH, heptyl 4-deoxy-4-deoxy-alpha-D-mannopyranoside
著者Jakob, R.P, Zihlmann, P, Rabbani, S, Maier, T, Ernst, B.
登録日2016-05-26
公開日2017-06-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献High-Affinity Carbohydrate-Lectin Interactions: How Nature Makes it Possible
To Be Published
5L4U
DownloadVisualize
BU of 5l4u by Molmil
Crystal structure of FimH lectin domain in complex with 2-Fluoro-Heptylmannoside
分子名称: Protein FimH, heptyl 2-fluoro-alpha-D-mannopyranoside
著者Jakob, R.P, Zihlmann, P, Rabbani, S, Maier, T, Ernst, B.
登録日2016-05-26
公開日2017-06-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献High-Affinity Carbohydrate-Lectin Interactions: How Nature Makes it Possible
To Be Published
5L4Y
DownloadVisualize
BU of 5l4y by Molmil
Crystal structure of FimH lectin domain in complex with 4-Fluoro-Heptylmannoside
分子名称: Protein FimH, heptyl 4-deoxy-4-fluoro-alpha-D-mannopyranoside
著者Jakob, R.P, Zihlmann, P, Rabbani, S, Maier, T, Ernst, B.
登録日2016-05-26
公開日2017-06-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献High-Affinity Carbohydrate-Lectin Interactions: How Nature Makes it Possible
To Be Published
5L4T
DownloadVisualize
BU of 5l4t by Molmil
Crystal structure of FimH lectin domain in complex with 2-Deoxy-Heptylmannoside
分子名称: Protein FimH, heptyl 2-deoxy-alpha-D-mannopyranoside
著者Jakob, R.P, Zihlmann, P, Rabbani, S, Maier, T, Ernst, B.
登録日2016-05-26
公開日2017-06-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献High-Affinity Carbohydrate-Lectin Interactions: How Nature Makes it Possible
To Be Published
5MCA
DownloadVisualize
BU of 5mca by Molmil
Crystal structure of FimH-LD R60P variant in the apo state
分子名称: Protein FimH, SULFATE ION
著者Jakob, R.P, Rabbani, S, Ernst, B, Maier, T.
登録日2016-11-09
公開日2017-12-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.604 Å)
主引用文献Conformational switch of the bacterial adhesin FimH in the absence of the regulatory domain: Engineering a minimalistic allosteric system.
J. Biol. Chem., 293, 2018
5MUC
DownloadVisualize
BU of 5muc by Molmil
Crystal structure of the FimH lectin domain in complex with 1,5-Anhydromannitol
分子名称: 1-deoxy-alpha-D-mannopyranose, Protein FimH
著者Jakob, R.P, Rabbani, S, Ernst, B, Maier, T.
登録日2017-01-13
公開日2018-02-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献KinITC-One Method Supports both Thermodynamic and Kinetic SARs as Exemplified on FimH Antagonists.
Chemistry, 24, 2018
7Q3N
DownloadVisualize
BU of 7q3n by Molmil
Cryo-EM of the complex between human uromodulin (UMOD)/Tamm-Horsfall protein (THP) and the FimH lectin domain from uropathogenic E. coli
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Type 1 fimbiral adhesin FimH, ...
著者Jovine, L, Xu, C, Stsiapanava, A, Carroni, M, Tunyasuvunakool, K, Jumper, J, Wu, B.
登録日2021-10-28
公開日2022-03-16
最終更新日2022-03-30
実験手法ELECTRON MICROSCOPY (7.4 Å)
主引用文献Structure of the decoy module of human glycoprotein 2 and uromodulin and its interaction with bacterial adhesin FimH.
Nat.Struct.Mol.Biol., 29, 2022
5L4V
DownloadVisualize
BU of 5l4v by Molmil
Crystal structure of FimH lectin domain in complex with 3-Deoxy-Heptylmannoside
分子名称: Protein FimH, heptyl 3-deoxy-alpha-D-mannopyranoside
著者Jakob, R.P, Zihlmann, P, Rabbani, S, Maier, T, Ernst, T.
登録日2016-05-26
公開日2017-06-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献High-Affinity Carbohydrate-Lectin Interactions: How Nature Makes it Possible
To Be Published
4XO9
DownloadVisualize
BU of 4xo9 by Molmil
Crystal structure of a FimH*DsG complex from E.coli K12 in space group C2
分子名称: Minor component of type 1 fimbriae, Protein FimH
著者Jakob, R.P, Eras, J, Glockshuber, R, Maier, T.
登録日2015-01-16
公開日2016-01-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Catch-bond mechanism of the bacterial adhesin FimH.
Nat Commun, 7, 2016
4XOD
DownloadVisualize
BU of 4xod by Molmil
Crystal structure of a FimH*DsG complex from E.coli F18
分子名称: FimG protein, FimH protein
著者Jakob, R.P, Sauer, M.M, Glockshuber, R, Maier, T.
登録日2015-01-16
公開日2016-01-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Catch-bond mechanism of the bacterial adhesin FimH.
Nat Commun, 7, 2016
4XOA
DownloadVisualize
BU of 4xoa by Molmil
Crystal structure of a FimH*DsG complex from E.coli K12 in space group P1
分子名称: FimG, Protein FimH
著者Jakob, R.P, Eras, J, Glockshuber, R, Maier, T.
登録日2015-01-16
公開日2016-01-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.541 Å)
主引用文献Catch-bond mechanism of the bacterial adhesin FimH.
Nat Commun, 7, 2016

219869

件を2024-05-15に公開中

PDB statisticsPDBj update infoContact PDBjnumon