Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1Y18
DownloadVisualize
BU of 1y18 by Molmil
Fab fragment of catalytic elimination antibody 34E4 E(H50)D mutant in complex with hapten
Descriptor: 2-AMINO-5,6-DIMETHYL-BENZIMIDAZOLE-1-PENTANOIC ACID, CHLORIDE ION, Catalytic antibody 34E4 heavy chain, ...
Authors:Debler, E.W, Ito, S, Heine, A, Wilson, I.A.
Deposit date:2004-11-17
Release date:2005-04-05
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural origins of efficient proton abstraction from carbon by a catalytic antibody
Proc.Natl.Acad.Sci.USA, 102, 2005
1Y0L
DownloadVisualize
BU of 1y0l by Molmil
Catalytic elimination antibody 34E4 in complex with hapten
Descriptor: 2-AMINO-5,6-DIMETHYL-BENZIMIDAZOLE-1-PENTANOIC ACID, CHLORIDE ION, Catalytic Antibody Fab 34E4 Heavy chain, ...
Authors:Debler, E.W, Ito, S, Heine, A, Wilson, I.A.
Deposit date:2004-11-15
Release date:2005-04-05
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural origins of efficient proton abstraction from carbon by a catalytic antibody
Proc.Natl.Acad.Sci.USA, 102, 2005
2C86
DownloadVisualize
BU of 2c86 by Molmil
x-ray structure of the N and C-terminal domain of coronavirus nucleocapsid protein.
Descriptor: NUCLEOCAPSID PROTEIN
Authors:Jayaram, H, Fan, H, Bowman, B.R, Ooi, A, Jayaram, J, Collinson, E.W, Lescar, J, Prasad, B.V.V.
Deposit date:2005-12-02
Release date:2006-06-21
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:X-Ray Structures of the N- and C-Terminal Domains of a Coronavirus Nucleocapsid Protein: Implications for Nucleocapsid Formation.
J.Virol., 80, 2006
2FIB
DownloadVisualize
BU of 2fib by Molmil
RECOMBINANT HUMAN GAMMA-FIBRINOGEN CARBOXYL TERMINAL FRAGMENT (RESIDUES 143-411) COMPLEXED TO THE PEPTIDE GLY-PRO-ARG-PRO AT PH 6.0
Descriptor: CALCIUM ION, FIBRINOGEN, GLY-PRO-ARG-PRO
Authors:Pratt, K.P, Cote, H.C.F, Chung, D.W, Stenkamp, R.E, Davie, E.W.
Deposit date:1997-06-03
Release date:1997-10-15
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:The primary fibrin polymerization pocket: three-dimensional structure of a 30-kDa C-terminal gamma chain fragment complexed with the peptide Gly-Pro-Arg-Pro.
Proc.Natl.Acad.Sci.USA, 94, 1997
2GE8
DownloadVisualize
BU of 2ge8 by Molmil
Structure of the C-terminal dimerization domain of infectious bronchitis virus nucleocapsid protein
Descriptor: Nucleocapsid protein
Authors:Jayaram, H, Fan, H, Bowman, B.R, Ooi, A, Jayaram, J, Collisson, E.W, Lescar, J, Prasad, B.V.
Deposit date:2006-03-18
Release date:2006-06-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-ray structures of the N- and C-terminal domains of a coronavirus nucleocapsid protein: implications for nucleocapsid formation.
J.Virol., 80, 2006
2G2R
DownloadVisualize
BU of 2g2r by Molmil
Green-fluorescent antibody 11G10 in complex with its hapten (nitro-stilbene derivative)
Descriptor: Green-fluorescent antibody (11G10)-heavy chain, Green-fluorescent antibody (11G10)-light chain, N-(TRANS-4'-NITRO-4-STILBENYL)-N-METHYL-5-AMINO-PENTANOIC ACID, ...
Authors:Debler, E.W, Wilson, I.A.
Deposit date:2006-02-16
Release date:2006-12-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:The Effects of Antibodies on Stilbene Excited-State Energetics.
Angew.Chem.Int.Ed.Engl., 45, 2006
2GEC
DownloadVisualize
BU of 2gec by Molmil
Structure of the N-terminal domain of avian infectious bronchitis virus nucleocapsid protein (strain Gray) in a novel dimeric arrangement
Descriptor: Nucleocapsid protein
Authors:Jayaram, H, Fan, H, Bowman, B.R, Ooi, A, Jayaram, J, Collisson, E.W, Lescar, J, Prasad, B.V.
Deposit date:2006-03-19
Release date:2006-06-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:X-ray structures of the N- and C-terminal domains of a coronavirus nucleocapsid protein: implications for nucleocapsid formation.
J.Virol., 80, 2006
2GE7
DownloadVisualize
BU of 2ge7 by Molmil
Structure of the C-terminal dimerization domain of infectious bronchitis virus nucleocapsid protein
Descriptor: Nucleocapsid protein
Authors:Jayaram, H, Fan, H, Bowman, B.R, Ooi, A, Jayaram, J, Collisson, E.W, Lescar, J, Prasad, B.V.
Deposit date:2006-03-18
Release date:2006-06-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray structures of the N- and C-terminal domains of a coronavirus nucleocapsid protein: implications for nucleocapsid formation.
J.Virol., 80, 2006
2GJZ
DownloadVisualize
BU of 2gjz by Molmil
Structure of Catalytic Elimination Antibody 13G5 from a crystal in space group P2(1)
Descriptor: Catalytic elimination antibody 13G5 heavy chain, Catalytic elimination antibody 13G5 light chain, ZINC ION
Authors:Debler, E.W, Wilson, I.A.
Deposit date:2006-03-31
Release date:2007-02-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Bifunctional Catalysis of Proton Transfer at an Antibody Active Site.
J.Am.Chem.Soc., 129, 2007
2GK0
DownloadVisualize
BU of 2gk0 by Molmil
Structure of Catalytic Elimination Antibody 13G5 from a twinned crystal in space group C2
Descriptor: Catalytic elimination antibody 13G5 heavy chain, Catalytic elimination antibody 13G5 light chain
Authors:Debler, E.W, Wilson, I.A.
Deposit date:2006-03-31
Release date:2007-02-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Bifunctional Catalysis of Proton Transfer at an Antibody Active Site.
J.Am.Chem.Soc., 129, 2007
2HQD
DownloadVisualize
BU of 2hqd by Molmil
Conformation of the AcrB Multidrug Efflux Pump in Mutants of the Putative Proton Relay Pathway
Descriptor: Acriflavine resistance protein B
Authors:Su, C.-C, Li, M, Gu, R, Takatsuka, Y, McDermott, G, Nikaido, H, Yu, E.W.
Deposit date:2006-07-18
Release date:2007-04-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.65 Å)
Cite:Conformation of the AcrB multidrug efflux pump in mutants of the putative proton relay pathway
J.Bacteriol., 188, 2006
2HQF
DownloadVisualize
BU of 2hqf by Molmil
Conformation of the AcrB Multidrug Efflux Pump in Mutants of the Putative Proton Relay Pathway
Descriptor: Acriflavine resistance protein B
Authors:Su, C.-C, Li, M, Gu, R, Takatsuka, Y, McDermott, G, Nikaido, H, Yu, E.W.
Deposit date:2006-07-18
Release date:2007-04-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.38 Å)
Cite:Conformation of the AcrB multidrug efflux pump in mutants of the putative proton relay pathway
J.Bacteriol., 188, 2006
2HQC
DownloadVisualize
BU of 2hqc by Molmil
Conformation of the AcrB Multidrug Efflux Pump in Mutants of the Putative Proton Relay Pathway
Descriptor: Acriflavine resistance protein B
Authors:Su, C.-C, Li, M, Gu, R, Takatsuka, Y, McDermott, G, Nikaido, H, Yu, E.W.
Deposit date:2006-07-18
Release date:2007-04-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.56 Å)
Cite:Conformation of the AcrB multidrug efflux pump in mutants of the putative proton relay pathway
J.Bacteriol., 188, 2006
2HQG
DownloadVisualize
BU of 2hqg by Molmil
Conformation of the AcrB Multidrug Efflux Pump in Mutants of the Putative Proton Relay Pathway
Descriptor: Acriflavine resistance protein B
Authors:Su, C.-C, Li, M, Gu, R, Takatsuka, Y, McDermott, G, Nikaido, H, Yu, E.W.
Deposit date:2006-07-18
Release date:2007-04-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.38 Å)
Cite:Conformation of the AcrB multidrug efflux pump in mutants of the putative proton relay pathway
J.Bacteriol., 188, 2006
2JP9
DownloadVisualize
BU of 2jp9 by Molmil
Structure of the Wilms Tumor Suppressor Protein Zinc Finger Domain Bound to DNA
Descriptor: DNA (5'-D(P*DCP*DGP*DCP*DGP*DGP*DGP*DGP*DGP*DCP*DGP*DTP*DCP*DTP*DGP*DCP*DGP*DC)-3'), DNA (5'-D(P*DGP*DCP*DGP*DCP*DAP*DGP*DAP*DCP*DGP*DCP*DCP*DCP*DCP*DCP*DGP*DCP*DG)-3'), Wilms tumor 1, ...
Authors:Stoll, R, Lee, B.M, Debler, E.W, Laity, J.H, Wilson, I.A, Dyson, H.J, Wright, P.E.
Deposit date:2007-04-30
Release date:2007-10-30
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure of the wilms tumor suppressor protein zinc finger domain bound to DNA
J.Mol.Biol., 372, 2007
2JPA
DownloadVisualize
BU of 2jpa by Molmil
Structure of the Wilms Tumor Suppressor Protein Zinc Finger Domain Bound to DNA
Descriptor: DNA (5'-D(P*DCP*DAP*DGP*DAP*DCP*DGP*DCP*DCP*DCP*DCP*DCP*DGP*DCP*DG)-3'), DNA (5'-D(P*DCP*DGP*DCP*DGP*DGP*DGP*DGP*DGP*DCP*DGP*DTP*DCP*DTP*DG)-3'), Wilms tumor 1, ...
Authors:Stoll, R, Lee, B.M, Debler, E.W, Laity, J.H, Wilson, I.A, Dyson, H.J, Wright, P.E.
Deposit date:2007-05-01
Release date:2007-10-30
Last modified:2020-02-05
Method:SOLUTION NMR
Cite:Structure of the wilms tumor suppressor protein zinc finger domain bound to DNA
J.Mol.Biol., 372, 2007
5KHS
DownloadVisualize
BU of 5khs by Molmil
Crystal structures of the Burkholderia multivorans hopanoid transporter HpnN
Descriptor: Putative RND superfamily efflux pump membrane protein
Authors:Su, C.-C, Yu, E.W.
Deposit date:2016-06-15
Release date:2017-06-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.758 Å)
Cite:Crystal structures of the Burkholderia multivorans hopanoid transporter HpnN.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5KHN
DownloadVisualize
BU of 5khn by Molmil
Crystal structures of the Burkholderia multivorans hopanoid transporter HpnN
Descriptor: RND transporter
Authors:Su, C.-C, Yu, E.W.
Deposit date:2016-06-15
Release date:2017-06-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.445 Å)
Cite:Crystal structures of the Burkholderia multivorans hopanoid transporter HpnN.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5KYM
DownloadVisualize
BU of 5kym by Molmil
Crystal Structure of the 1-acyl-sn-glycerophosphate (LPA) acyltransferase, PlsC, from Thermotoga maritima
Descriptor: 1-HEPTADECANOYL-2-TRIDECANOYL-3-GLYCEROL-PHOSPHONYL CHOLINE, 1-acyl-sn-glycerol-3-phosphate acyltransferase, DODECYL-BETA-D-MALTOSIDE, ...
Authors:Robertson, R.M, Yao, J, Gajewski, S, Kumar, G, Martin, E.W, Rock, C.O, White, S.W.
Deposit date:2016-07-21
Release date:2017-07-26
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A two-helix motif positions the lysophosphatidic acid acyltransferase active site for catalysis within the membrane bilayer.
Nat. Struct. Mol. Biol., 24, 2017
5ML9
DownloadVisualize
BU of 5ml9 by Molmil
Cocrystal structure of Fc gamma receptor IIIa interacting with Affimer F4, a specific binding protein which blocks IgG binding to the receptor.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Affimer F4 with specificity for Fc gamma receptor IIIa, CHLORIDE ION, ...
Authors:Robinson, J.I, Tomlinson, D.C, Baxter, E.W, Owen, R.L, Thomsen, M, Win, S.J, Nettleship, J.E, Tiede, C, Foster, R.J, Waterhouse, M.P, Harris, S.A, Owens, R.J, Fishwick, C.W.G, Goldman, A, McPherson, M.J, Morgan, A.W.
Deposit date:2016-12-06
Release date:2017-12-13
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Affimer proteins inhibit immune complex binding to Fc gamma RIIIa with high specificity through competitive and allosteric modes of action.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5MN2
DownloadVisualize
BU of 5mn2 by Molmil
Cocrystal structure of Fc gamma receptor IIIa interacting with Affimer G3, a specific binding protein which blocks IgG binding to the receptor.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Affimer G3, DI(HYDROXYETHYL)ETHER, ...
Authors:Robinson, J.I, Owen, R.L, Tomlinson, D.C, Baxter, E.W, Nettleship, J.E, Waterhouse, M.P, Harris, S.A, Owens, R.J, McPherson, M.J, Morgan, A.W, Tiede, C, Goldman, A, Thomsen, M.
Deposit date:2016-12-12
Release date:2017-12-13
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Affimer proteins inhibit immune complex binding to Fc gamma RIIIa with high specificity through competitive and allosteric modes of action.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5MU6
DownloadVisualize
BU of 5mu6 by Molmil
Human N-myristoyltransferase (NMT1) with Myristoyl-CoA and IMP-1088 inhibitor bound
Descriptor: 1-[5-[3,4-bis(fluoranyl)-2-[2-(1,3,5-trimethylpyrazol-4-yl)ethoxy]phenyl]-1-methyl-indazol-3-yl]-~{N},~{N}-dimethyl-methanamine, GLYCEROL, Glycylpeptide N-tetradecanoyltransferase 1, ...
Authors:Perez-Dorado, I, Bell, A.S, Tate, E.W.
Deposit date:2017-01-12
Release date:2018-02-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Fragment-derived inhibitors of human N-myristoyltransferase block capsid assembly and replication of the common cold virus.
Nat Chem, 10, 2018
5NPQ
DownloadVisualize
BU of 5npq by Molmil
Human N-myristoyltransferase 1 (MNT1) with Myristoyl-CoA analogue X10 bound
Descriptor: GLYCEROL, Glycylpeptide N-tetradecanoyltransferase 1, MAGNESIUM ION, ...
Authors:Shen, M, Perez-Dorado, I, Fedoryshchak, R, Tate, E.W.
Deposit date:2017-04-18
Release date:2018-05-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.372 Å)
Cite:Human N-myristoyltransferase 1 (MNT1) with Myristoyl-CoA analogue X10 bound.
To be published
3MBY
DownloadVisualize
BU of 3mby by Molmil
Ternary complex of DNA Polymerase BETA with template base A and 8oxodGTP in the active site with a dideoxy terminated primer
Descriptor: 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, DNA (5'-D(*CP*CP*GP*AP*CP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ...
Authors:Batra, V.K, Beard, W.A, Hou, E.W, Pedersen, L.C, Prasad, R, Wilson, S.H.
Deposit date:2010-03-26
Release date:2010-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mutagenic conformation of 8-oxo-7,8-dihydro-2'-dGTP in the confines of a DNA polymerase active site.
Nat.Struct.Mol.Biol., 17, 2010
3OOC
DownloadVisualize
BU of 3ooc by Molmil
Crystal structure of the membrane fusion protein CusB from Escherichia coli
Descriptor: Cation efflux system protein cusB
Authors:Su, C.-C, Yang, F, Long, F, Reyon, D, Routh, M.D, Kuo, D.W, Mokhtari, A.K, Van Ornam, J.D, Rabe, K.L, Hoy, J.A, Lee, Y.J, Rajashankar, K.R, Yu, E.W.
Deposit date:2010-08-30
Release date:2010-12-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.404 Å)
Cite:Crystal structure of the membrane fusion protein CusB from Escherichia coli.
J.Mol.Biol., 393, 2009

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon