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6TCL
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BU of 6tcl by Molmil
Photosystem I tetramer
分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
著者Chen, M, Perez-Boerema, A, Li, S, Amunts, A.
登録日2019-11-06
公開日2020-02-19
最終更新日2020-03-25
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Distinct structural modulation of photosystem I and lipid environment stabilizes its tetrameric assembly.
Nat.Plants, 6, 2020
8U2C
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BU of 8u2c by Molmil
Gaussian mixture model based single particle refinement - ABC transporter (inhibitor-bound ABCG2 from EMPIAR-10374)
分子名称: 5D3 Fab heavy chain variable domain, 5D3 Fab light chain variable domain, Broad substrate specificity ATP-binding cassette transporter ABCG2, ...
著者Chen, M, Pintilie, G.
登録日2023-09-05
公開日2023-11-15
最終更新日2024-01-24
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Improving resolution and resolvability of single-particle cryoEM structures using Gaussian mixture models.
Nat.Methods, 21, 2024
8U28
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BU of 8u28 by Molmil
Gaussian mixture model based single particle refinement - SARS (SARS-CoV-2 Spike Proteins on intact virions from EMPIAR-10492)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Chen, M, Pintilie, G.
登録日2023-09-05
公開日2023-11-15
最終更新日2024-01-24
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Improving resolution and resolvability of single-particle cryoEM structures using Gaussian mixture models.
Nat.Methods, 21, 2024
8U26
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BU of 8u26 by Molmil
Gaussian Mixture Models based single particle refinement - GPCR (Substance P bound to active human neurokinin 1 receptor in complex with miniGs399 from EMPIAR-10786)
分子名称: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
著者Chen, M, Pintilie, G.
登録日2023-09-05
公開日2023-11-15
最終更新日2024-01-24
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Improving resolution and resolvability of single-particle cryoEM structures using Gaussian mixture models.
Nat.Methods, 21, 2024
5GHA
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BU of 5gha by Molmil
Sulfur Transferase TtuA in complex with Sulfur Carrier TtuB
分子名称: 1,2-ETHANEDIOL, SULFATE ION, Sulfur Carrier TtuB, ...
著者Chen, M, Narai, S, Tanaka, Y, Yao, M.
登録日2016-06-19
公開日2017-05-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.502 Å)
主引用文献Biochemical and structural characterization of oxygen-sensitive 2-thiouridine synthesis catalyzed by an iron-sulfur protein TtuA
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
8SOR
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BU of 8sor by Molmil
Structure of human PI3KC3-C1 complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, Beclin 1-associated autophagy-related key regulator, Beclin-1, ...
著者Chen, M, Hurley, J.H.
登録日2023-04-29
公開日2023-06-21
最終更新日2023-06-28
実験手法ELECTRON MICROSCOPY (3.96 Å)
主引用文献Structure and activation of the human autophagy-initiating ULK1C:PI3KC3-C1 supercomplex
bioRxiv, 2023
8SQZ
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BU of 8sqz by Molmil
Structure of human ULK1 complex core (2:2:2 stoichiometry) in the PI3KC3-C1 mixture
分子名称: Autophagy-related protein 13, RB1-inducible coiled-coil protein 1, Serine/threonine-protein kinase ULK1
著者Chen, M, Hurley, J.H.
登録日2023-05-04
公開日2023-06-21
実験手法ELECTRON MICROSCOPY (5.85 Å)
主引用文献Structure and activation of the human autophagy-initiating ULK1C:PI3KC3-C1 supercomplex
bioRxiv, 2023
8SRQ
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BU of 8srq by Molmil
Structure of human ULK1C:PI3KC3-C1 supercomplex
分子名称: Autophagy-related protein 13, Beclin 1-associated autophagy-related key regulator, Beclin-1-C 35 kDa, ...
著者Chen, M, Hurley, J.H.
登録日2023-05-05
公開日2023-06-21
実験手法ELECTRON MICROSCOPY (6.2 Å)
主引用文献Structure and activation of the human autophagy-initiating ULK1C:PI3KC3-C1 supercomplex
bioRxiv, 2023
8SOI
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BU of 8soi by Molmil
Structure of human ULK1 complex core (2:1:1 stoichiometry)
分子名称: Autophagy-related protein 13, RB1-inducible coiled-coil protein 1, Serine/threonine-protein kinase ULK1
著者Chen, M, Hurley, J.H.
登録日2023-04-28
公開日2023-06-21
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structure and activation of the human autophagy-initiating ULK1C:PI3KC3-C1 supercomplex
bioRxiv, 2023
8SRM
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BU of 8srm by Molmil
Structure of human ULK1 complex core (2:2:2 stoichiometry) of the ATG13(450-517) mutant
分子名称: Autophagy-related protein 13, RB1-inducible coiled-coil protein 1, Serine/threonine-protein kinase ULK1
著者Chen, M, Hurley, J.H.
登録日2023-05-05
公開日2023-06-21
実験手法ELECTRON MICROSCOPY (4.46 Å)
主引用文献Structure and activation of the human autophagy-initiating ULK1C:PI3KC3-C1 supercomplex
bioRxiv
7PTX
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BU of 7ptx by Molmil
Alpha-latrocrustotoxin monomer
分子名称: Alpha-latrocrustotoxin-Lt1a
著者Chen, M, Gatsogiannis, C.
登録日2021-09-27
公開日2021-12-08
実験手法ELECTRON MICROSCOPY (4.03 Å)
主引用文献Molecular architecture of black widow spider neurotoxins.
Nat Commun, 12, 2021
7PTY
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BU of 7pty by Molmil
Delta-latroinsectotoxin dimer
分子名称: Delta-latroinsectotoxin-Lt1a
著者Chen, M, Gatsogiannis, C.
登録日2021-09-27
公開日2021-12-08
実験手法ELECTRON MICROSCOPY (4.63 Å)
主引用文献Molecular architecture of black widow spider neurotoxins.
Nat Commun, 12, 2021
5B4E
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BU of 5b4e by Molmil
Sulfur Transferase TtuA in complex with iron sulfur cluster and ATP derivative
分子名称: IRON/SULFUR CLUSTER, ISOPROPYL ALCOHOL, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Chen, M, Narai, S, Tanaka, Y, Yao, M.
登録日2016-04-03
公開日2017-05-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.698 Å)
主引用文献Biochemical and structural characterization of oxygen-sensitive 2-thiouridine synthesis catalyzed by an iron-sulfur protein TtuA
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5B4F
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BU of 5b4f by Molmil
Sulfur Transferase TtuA in complex with iron sulfur cluster
分子名称: IRON/SULFUR CLUSTER, SULFATE ION, Sulfur Transferase TtuA, ...
著者Chen, M, Narai, S, Tanaka, Y, Yao, M.
登録日2016-04-03
公開日2017-05-10
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Biochemical and structural characterization of oxygen-sensitive 2-thiouridine synthesis catalyzed by an iron-sulfur protein TtuA
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5X6C
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BU of 5x6c by Molmil
Crystal structure of SepRS-SepCysE from Methanocaldococcus jannaschii
分子名称: ADENOSINE-5'-TRIPHOSPHATE, O-phosphoserine--tRNA(Cys) ligase, SULFATE ION, ...
著者Chen, M, Kato, K, Yao, M.
登録日2017-02-21
公開日2017-12-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.101 Å)
主引用文献Structural basis for tRNA-dependent cysteine biosynthesis
Nat Commun, 8, 2017
5X6B
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BU of 5x6b by Molmil
Crystal structure of SepCysE-SepCysS in complex with tRNACys from Methanocaldococcus jannaschii
分子名称: O-phospho-L-seryl-tRNA:Cys-tRNA synthase, Uncharacterized protein MJ1481, tRNACys
著者Chen, M, Kato, K, Yao, M.
登録日2017-02-21
公開日2017-12-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.596 Å)
主引用文献Structural basis for tRNA-dependent cysteine biosynthesis
Nat Commun, 8, 2017
8JTN
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BU of 8jtn by Molmil
Tudor domain of TDRD3 in complex with a small molecule
分子名称: 2-propyl-2-azoniatricyclo[7.3.0.0^{3,7}]dodeca-1(9),2,7-trien-8-amine, Tudor domain-containing protein 3
著者Chen, M, Wang, Z, Li, W, Shang, X, Liu, Y.
登録日2023-06-22
公開日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Tudor domain of TDRD3 in complex with a small molecule antagonist.
Biochim Biophys Acta Gene Regul Mech, 1866, 2023
3W9Z
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BU of 3w9z by Molmil
Crystal structure of DusC
分子名称: FLAVIN MONONUCLEOTIDE, tRNA-dihydrouridine synthase C
著者Chen, M, Yu, J, Tanaka, Y, Tanaka, I, Yao, M.
登録日2013-04-19
公開日2013-07-31
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of dihydrouridine synthase C (DusC) from Escherichia coli
Acta Crystallogr.,Sect.F, 69, 2013
5IMP
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BU of 5imp by Molmil
Crystal structure of N299A Aspergillus terreus aristolochene synthase complexed with (1S,8S,9aR)-1,9a-dimethyl-8-(prop-1-en-2-yl)decahydroquinolizin-5-ium
分子名称: (1S,5S,8S,9aR)-1,9a-dimethyl-8-(prop-1-en-2-yl)octahydro-2H-quinolizinium, Aristolochene synthase, GLYCEROL, ...
著者Chen, M, Christianson, D.W.
登録日2016-03-06
公開日2016-05-25
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.038 Å)
主引用文献Probing the Role of Active Site Water in the Sesquiterpene Cyclization Reaction Catalyzed by Aristolochene Synthase.
Biochemistry, 55, 2016
5IMI
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BU of 5imi by Molmil
Crystal structure of S303A Aspergillus terreus aristolochene synthase complexed with (1S,8S,9aR)-1,9a-dimethyl-8-(prop-1-en-2-yl)decahydroquinolizin-5-ium
分子名称: (1S,5S,8S,9aR)-1,9a-dimethyl-8-(prop-1-en-2-yl)octahydro-2H-quinolizinium, Aristolochene synthase, GLYCEROL, ...
著者Chen, M, Christianson, D.W.
登録日2016-03-06
公開日2016-05-25
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.462 Å)
主引用文献Probing the Role of Active Site Water in the Sesquiterpene Cyclization Reaction Catalyzed by Aristolochene Synthase.
Biochemistry, 55, 2016
5IN8
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BU of 5in8 by Molmil
Crystal structure of Q151H Aspergillus terreus aristolochene synthase
分子名称: Aristolochene synthase, GLYCEROL, MAGNESIUM ION, ...
著者Chen, M, Christianson, D.W.
登録日2016-03-07
公開日2016-05-25
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Probing the Role of Active Site Water in the Sesquiterpene Cyclization Reaction Catalyzed by Aristolochene Synthase.
Biochemistry, 55, 2016
5IMN
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BU of 5imn by Molmil
Crystal structure of N299A/S303A Aspergillus terreus aristolochene synthase complexed with (1S,8S,9aR)-1,9a-dimethyl-8-(prop-1-en-2-yl)decahydroquinolizin-5-ium
分子名称: (1S,5S,8S,9aR)-1,9a-dimethyl-8-(prop-1-en-2-yl)octahydro-2H-quinolizinium, Aristolochene synthase, GLYCEROL, ...
著者Chen, M, Christianson, D.W.
登録日2016-03-06
公開日2016-05-25
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.527 Å)
主引用文献Probing the Role of Active Site Water in the Sesquiterpene Cyclization Reaction Catalyzed by Aristolochene Synthase.
Biochemistry, 55, 2016
5IVG
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BU of 5ivg by Molmil
Crystal structure of Aspergillus terreus aristolochene synthase N299A complexed with farnesyl thiolodiphosphate
分子名称: Aristolochene synthase, GLYCEROL, MAGNESIUM ION, ...
著者Chen, M, Christianson, D.W.
登録日2016-03-20
公開日2016-05-25
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Probing the Role of Active Site Water in the Sesquiterpene Cyclization Reaction Catalyzed by Aristolochene Synthase.
Biochemistry, 55, 2016
4KVY
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BU of 4kvy by Molmil
Crystal structure of Aspergillus terreus aristolochene synthase complexed with (1S,8S,9aR)-1,9a-dimethyl-8-(prop-1-en-2-yl)decahydroquinolizin-5-ium
分子名称: (1S,5S,8S,9aR)-1,9a-dimethyl-8-(prop-1-en-2-yl)octahydro-2H-quinolizinium, Aristolochene synthase, GLYCEROL, ...
著者Chen, M, Al-lami, N, Janvier, M, D'Antonio, E.L, Faraldos, J.A, Cane, D.E, Allemann, R.K, Christianson, D.W.
登録日2013-05-23
公開日2013-08-14
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Mechanistic insights from the binding of substrate and carbocation intermediate analogues to aristolochene synthase.
Biochemistry, 52, 2013
4KUX
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BU of 4kux by Molmil
Crystal structure of Aspergillus terreus aristolochene synthase complexed with farnesyl thiolodiphosphate (FSPP)
分子名称: Aristolochene synthase, GLYCEROL, MAGNESIUM ION, ...
著者Chen, M, Faraldos, J.A, Al-lami, N, Janvier, M, D'Antonio, E.L, Cane, D.E, Allemann, R.K, Christianson, D.W.
登録日2013-05-22
公開日2013-08-14
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Mechanistic insights from the binding of substrate and carbocation intermediate analogues to aristolochene synthase.
Biochemistry, 52, 2013

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