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Drosophila melanogaster JMJD7 (dmJMJD7) in complex with Mn and N-oxalylglycine (NOG)
分子名称:	1,2-ETHANEDIOL, GH14974p, MANGANESE (II) ION, ...
著者	Chowdhury, R, Schofield, C.J.
登録日	2022-02-16
公開日	2022-04-27
最終更新日	2024-01-31
実験手法	X-RAY DIFFRACTION (2.1 Å)
主引用文献	Conservation of the unusual dimeric JmjC fold of JMJD7 from Drosophila melanogaster to humans. Sci Rep, 12, 2022

7YXJ

Drosophila melanogaster JMJD7 (dmJMJD7) in complex with Mn and 2,4-PDCA
分子名称:	1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GH14974p, ...
著者	Chowdhury, R, Schofield, C.J.
登録日	2022-02-16
公開日	2022-04-27
最終更新日	2024-01-31
実験手法	X-RAY DIFFRACTION (2.45 Å)
主引用文献	Conservation of the unusual dimeric JmjC fold of JMJD7 from Drosophila melanogaster to humans. Sci Rep, 12, 2022

7YXL

Drosophila melanogaster JMJD7 (dmJMJD7) in complex with Mn and N-oxalyl-D-phenylalanine (NOFD)
分子名称:	1,2-ETHANEDIOL, ACETATE ION, GH14974p, ...
著者	Chowdhury, R, Schofield, C.J.
登録日	2022-02-16
公開日	2022-04-27
最終更新日	2024-01-31
実験手法	X-RAY DIFFRACTION (2.2 Å)
主引用文献	Conservation of the unusual dimeric JmjC fold of JMJD7 from Drosophila melanogaster to humans. Sci Rep, 12, 2022

7YXK

Drosophila melanogaster JMJD7 (dmJMJD7) in complex with Mn and N-oxalyl-D-alanine (NODA)
分子名称:	(2~{R})-2-(carboxycarbonylamino)propanoic acid, 1,2-ETHANEDIOL, ACETATE ION, ...
著者	Chowdhury, R, Schofield, C.J.
登録日	2022-02-16
公開日	2022-04-27
最終更新日	2024-01-31
実験手法	X-RAY DIFFRACTION (2.43 Å)
主引用文献	Conservation of the unusual dimeric JmjC fold of JMJD7 from Drosophila melanogaster to humans. Sci Rep, 12, 2022

7YXG

Drosophila melanogaster JMJD7 (dmJMJD7) in complex with Mn and 2OG
分子名称:	1,2-ETHANEDIOL, 2-OXOGLUTARIC ACID, GH14974p, ...
著者	Chowdhury, R, Schofield, C.J.
登録日	2022-02-16
公開日	2022-04-27
最終更新日	2024-01-31
実験手法	X-RAY DIFFRACTION (1.641 Å)
主引用文献	Conservation of the unusual dimeric JmjC fold of JMJD7 from Drosophila melanogaster to humans. Sci Rep, 12, 2022

7YXH

Drosophila melanogaster JMJD7 (dmJMJD7) in complex with Mn and succinate
分子名称:	1,2-ETHANEDIOL, GH14974p, MAGNESIUM ION, ...
著者	Chowdhury, R, Schofield, C.J.
登録日	2022-02-16
公開日	2022-04-27
最終更新日	2024-01-31
実験手法	X-RAY DIFFRACTION (2.3 Å)
主引用文献	Conservation of the unusual dimeric JmjC fold of JMJD7 from Drosophila melanogaster to humans. Sci Rep, 12, 2022

7ZCC

yxBC from Bacillus subtilis in complex with Mn and N-oxalylglycine (NOG)
分子名称:	GLYCEROL, MANGANESE (II) ION, N-OXALYLGLYCINE, ...
著者	Chowdhury, R, Schofield, C.J.
登録日	2022-03-27
公開日	2023-04-05
最終更新日	2024-02-07
実験手法	X-RAY DIFFRACTION (1.848 Å)
主引用文献	yxBC from Bacillus subtilis in complex with Mn and N-oxalylglycine (NOG) To Be Published

2Y34

S-nitrosylated PHD2 (NO exposed) in complex with Fe(II) and UN9
分子名称:	EGL NINE HOMOLOG 1, FE (II) ION, N-[(1-CHLORO-4-HYDROXYISOQUINOLIN-3-YL)CARBONYL]GLYCINE
著者	Chowdhury, R, McDonough, M.A, Schofield, C.J.
登録日	2010-12-18
公開日	2010-12-29
最終更新日	2023-12-20
実験手法	X-RAY DIFFRACTION (2.01 Å)
主引用文献	Studies on the reaction of nitric oxide with the hypoxia-inducible factor prolyl hydroxylase domain 2 (EGLN1). J. Mol. Biol., 410, 2011

2Y33

S-nitrosylated PHD2 (GSNO soaked) in complex with Zn(II) and UN9
分子名称:	EGL NINE HOMOLOG 1, N-[(1-CHLORO-4-HYDROXYISOQUINOLIN-3-YL)CARBONYL]GLYCINE, ZINC ION
著者	Chowdhury, R, Clifton, I.J, Schofield, C.J.
登録日	2010-12-18
公開日	2010-12-29
最終更新日	2023-12-20
実験手法	X-RAY DIFFRACTION (2 Å)
主引用文献	Studies on the Reaction of Nitric Oxide with the Hypoxia-Inducible Factor Prolyl Hydroxylase Domain 2 (Egln1) J.Mol.Biol., 410, 2011

6YVW

HIF prolyl hydroxylase 2 (PHD2/ EGLN1) in complex with monocyclic BB-328
分子名称:	4-[(5-bromanyl-4,6-dimethyl-pyridin-2-yl)amino]-4-oxidanylidene-butanoic acid, Egl nine homolog 1, FE (III) ION, ...
著者	Chowdhury, R, Banerji, B, Schofield, C.J.
登録日	2020-04-28
公開日	2020-12-30
最終更新日	2024-01-24
実験手法	X-RAY DIFFRACTION (1.97 Å)
主引用文献	Use of cyclic peptides to induce crystallization: case study with prolyl hydroxylase domain 2. Sci Rep, 10, 2020

6YW1

HIF prolyl hydroxylase 2 (PHD2/ EGLN1) in complex with 2OG and RaPID-derived silent allosteric cyclic peptide 3C (14-mer)
分子名称:	2-OXOGLUTARIC ACID, BICARBONATE ION, Egl nine homolog 1, ...
著者	Chowdhury, R, Schofield, C.J.
登録日	2020-04-29
公開日	2020-12-30
最終更新日	2024-01-24
実験手法	X-RAY DIFFRACTION (1.46 Å)
主引用文献	Use of cyclic peptides to induce crystallization: case study with prolyl hydroxylase domain 2. Sci Rep, 10, 2020

6YW3

HIF PROLYL HYDROXYLASE 2 (PHD2/ EGLN1) in complex with N-Oxalyl Glycine (NOG), HIF-1ALPHA CODD (556-574) and a RaPID-derived cyclic peptide 3C (14-mer)
分子名称:	Egl nine homolog 1, GLYCEROL, Hypoxia-inducible factor 1-alpha, ...
著者	Chowdhury, R, Schofield, C.J.
登録日	2020-04-29
公開日	2020-12-30
最終更新日	2024-01-24
実験手法	X-RAY DIFFRACTION (2.279 Å)
主引用文献	Use of cyclic peptides to induce crystallization: case study with prolyl hydroxylase domain 2. Sci Rep, 10, 2020

6YW2

HIF prolyl hydroxylase 2 (PHD2/ EGLN1) in complex with bicyclic FG2216 and RaPID-derived cyclic peptide 3C (14-mer)
分子名称:	Egl nine homolog 1, MANGANESE (II) ION, N-[(1-CHLORO-4-HYDROXYISOQUINOLIN-3-YL)CARBONYL]GLYCINE, ...
著者	Chowdhury, R, Schofield, C.J.
登録日	2020-04-29
公開日	2020-12-30
最終更新日	2024-01-24
実験手法	X-RAY DIFFRACTION (2.14 Å)
主引用文献	Use of cyclic peptides to induce crystallization: case study with prolyl hydroxylase domain 2. Sci Rep, 10, 2020

6YW0

Lysine-N,N-Dimethylated HIF prolyl hydroxylase 2 (PHD2/ EGLN1) in complex with BB-287
分子名称:	4-(isoquinolin-3-ylamino)-4-oxobutanoic acid, BICARBONATE ION, Egl nine homolog 1, ...
著者	Chowdhury, R, Schofield, C.J.
登録日	2020-04-29
公開日	2020-12-30
最終更新日	2024-01-24
実験手法	X-RAY DIFFRACTION (2.2 Å)
主引用文献	Use of cyclic peptides to induce crystallization: case study with prolyl hydroxylase domain 2. Sci Rep, 10, 2020

6YVZ

HIF prolyl hydroxylase 2 (PHD2/ EGLN1) in complex with bicyclic JLS-367
分子名称:	4-[(5-bromanylisoquinolin-3-yl)amino]-4-oxidanylidene-butanoic acid, BICARBONATE ION, Egl nine homolog 1, ...
著者	Chowdhury, R, Sorensen, J.L, Schofield, C.J.
登録日	2020-04-29
公開日	2020-12-30
最終更新日	2024-01-24
実験手法	X-RAY DIFFRACTION (1.91 Å)
主引用文献	Use of cyclic peptides to induce crystallization: case study with prolyl hydroxylase domain 2. Sci Rep, 10, 2020

6YVX

HIF prolyl hydroxylase 2 (PHD2/ EGLN1) in complex with bicyclic BB-287
分子名称:	4-(isoquinolin-3-ylamino)-4-oxobutanoic acid, BICARBONATE ION, Egl nine homolog 1, ...
著者	Chowdhury, R, Banerji, B, Schofield, C.J.
登録日	2020-04-28
公開日	2020-12-30
最終更新日	2024-01-24
実験手法	X-RAY DIFFRACTION (1.8 Å)
主引用文献	Use of cyclic peptides to induce crystallization: case study with prolyl hydroxylase domain 2. Sci Rep, 10, 2020

6YW4

HIF prolyl hydroxylase 2 (PHD2/ EGLN1) in complex with N-oxalylglycine (NOG) and a RaPID-derived silent allosteric cyclic peptide 3C (14-mer)
分子名称:	Egl nine homolog 1, MANGANESE (II) ION, N-OXALYLGLYCINE, ...
著者	Chowdhury, R, Schofield, C.J.
登録日	2020-04-29
公開日	2020-12-30
最終更新日	2024-01-24
実験手法	X-RAY DIFFRACTION (1.528 Å)
主引用文献	Use of cyclic peptides to induce crystallization: case study with prolyl hydroxylase domain 2. Sci Rep, 10, 2020

3HQU

PHD2:Fe:UN9:partial HIF1-alpha substrate complex
分子名称:	Egl nine homolog 1, FE (II) ION, Hypoxia-inducible factor 1 alpha, ...
著者	Chowdhury, R, McDonough, M.A, Schofield, C.J.
登録日	2009-06-08
公開日	2009-07-28
最終更新日	2023-11-01
実験手法	X-RAY DIFFRACTION (2.3 Å)
主引用文献	Structural basis for binding of hypoxia-inducible factor to the oxygen-sensing prolyl hydroxylases Structure, 17, 2009

3HQR

PHD2:Mn:NOG:HIF1-alpha substrate complex
分子名称:	Egl nine homolog 1, Hypoxia-inducible factor 1 alpha, MANGANESE (II) ION, ...
著者	Chowdhury, R, McDonough, M.A, Schofield, C.J.
登録日	2009-06-08
公開日	2009-07-28
最終更新日	2023-11-01
実験手法	X-RAY DIFFRACTION (2 Å)
主引用文献	Structural basis for binding of hypoxia-inducible factor to the oxygen-sensing prolyl hydroxylases Structure, 17, 2009

5LAS

HIF prolyl hydroxylase 2 (PHD2-R281C/P317C/R396T) cross-linked to HIF-1alpha NODD-L397C/D412C and N-oxalylglycine (NOG) (complex-3)
分子名称:	Egl nine homolog 1, Hypoxia-inducible factor 1-alpha, MANGANESE (II) ION, ...
著者	Chowdhury, R, Schofield, C.J.
登録日	2016-06-14
公開日	2016-08-31
最終更新日	2024-01-10
実験手法	X-RAY DIFFRACTION (2.1 Å)
主引用文献	Structural basis for oxygen degradation domain selectivity of the HIF prolyl hydroxylases. Nat Commun, 7, 2016

5LB6

HIF prolyl hydroxylase 2 (PHD2/EGLN1) R371H variant in complex with Mn(II) and N-[(1-chloro-4-hydroxyisoquinolin-3-yl)carbonyl]glycine (IOX3/UN9)
分子名称:	Egl nine homolog 1, GLYCEROL, MANGANESE (II) ION, ...
著者	Chowdhury, R, Schofield, C.J.
登録日	2016-06-15
公開日	2016-08-31
最終更新日	2024-01-10
実験手法	X-RAY DIFFRACTION (1.7 Å)
主引用文献	Structural basis for oxygen degradation domain selectivity of the HIF prolyl hydroxylases. Nat Commun, 7, 2016

5LBE

HIF prolyl hydroxylase 2 (PHD2/EGLN1) G294E variant in complex with Mn(II) and N-[(1-chloro-4-hydroxyisoquinolin-3-yl)carbonyl]glycine (IOX3/FG2216)
分子名称:	BICARBONATE ION, Egl nine homolog 1, MANGANESE (II) ION, ...
著者	Chowdhury, R, Schofield, C.J.
登録日	2016-06-15
公開日	2016-08-31
最終更新日	2024-01-10
実験手法	X-RAY DIFFRACTION (1.749 Å)
主引用文献	Structural basis for oxygen degradation domain selectivity of the HIF prolyl hydroxylases. Nat Commun, 7, 2016

5LBC

HIF prolyl hydroxylase 2 (PHD2/EGLN1) I280V/R281L/I292V variant in complex with Mn(II) and N-[(1-chloro-4-hydroxyisoquinolin-3-yl)carbonyl]glycine (IOX3/FG2216)
分子名称:	BICARBONATE ION, CHLORIDE ION, Egl nine homolog 1, ...
著者	Chowdhury, R, Schofield, C.J.
登録日	2016-06-15
公開日	2016-08-31
最終更新日	2024-01-10
実験手法	X-RAY DIFFRACTION (1.816 Å)
主引用文献	Structural basis for oxygen degradation domain selectivity of the HIF prolyl hydroxylases. Nat Commun, 7, 2016

5LBB

HIF prolyl hydroxylase 2 (PHD2/EGLN1) R396T variant in complex with Mn(II) and N-[(1-chloro-4-hydroxyisoquinolin-3-yl)carbonyl]glycine (IOX3/UN9)
分子名称:	BICARBONATE ION, Egl nine homolog 1, MANGANESE (II) ION, ...
著者	Chowdhury, R, Schofield, C.J.
登録日	2016-06-15
公開日	2016-08-31
最終更新日	2024-01-10
実験手法	X-RAY DIFFRACTION (1.7 Å)
主引用文献	Structural basis for oxygen degradation domain selectivity of the HIF prolyl hydroxylases. Nat Commun, 7, 2016

5L9B

HIF PROLYL HYDROXYLASE 2 (PHD2/ EGLN1) IN COMPLEX WITH 2-OXOGLUTARATE (2OG) AND HIF-1ALPHA CODD (556-574)
分子名称:	2-OXOGLUTARIC ACID, Egl nine homolog 1, Hypoxia-inducible factor 1-alpha, ...
著者	Chowdhury, R, Schofield, C.J.
登録日	2016-06-10
公開日	2016-08-31
最終更新日	2024-01-10
実験手法	X-RAY DIFFRACTION (1.95 Å)
主引用文献	Structural basis for oxygen degradation domain selectivity of the HIF prolyl hydroxylases. Nat Commun, 7, 2016

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