3DRG
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![BU of 3drg by Molmil](/molmil-images/mine/3drg) | Lactococcal OppA complexed with bradykinin in the closed conformation | Descriptor: | Bradykinin, CHLORIDE ION, Oligopeptide-binding protein oppA | Authors: | Berntsson, R.P.-A, Doeven, M.K, Duurkens, R.H, Sengupta, D, Marrink, S.-J, Thunnissen, A.-M, Poolman, B, Slotboom, D.-J. | Deposit date: | 2008-07-11 | Release date: | 2009-03-31 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | The structural basis for peptide selection by the transport receptor OppA Embo J., 28, 2009
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3DRI
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![BU of 3dri by Molmil](/molmil-images/mine/3dri) | Crystal structure of Lactococcal OppA co-crystallized with an octamer peptide in an open conformation | Descriptor: | Oligopeptide-binding protein oppA, peptide AASASA | Authors: | Berntsson, R.P.-A, Doeven, M.K, Duurkens, R.H, Sengupta, D, Marrink, S.-J, Thunnissen, A.-M, Poolman, B, Slotboom, D.-J. | Deposit date: | 2008-07-11 | Release date: | 2009-03-31 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | The structural basis for peptide selection by the transport receptor OppA Embo J., 28, 2009
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3DRJ
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![BU of 3drj by Molmil](/molmil-images/mine/3drj) | Crystal structure of Lactococcal OppA co-crystallized with pTH-related peptide in an open conformation | Descriptor: | Oligopeptide-binding protein oppA, pTH-related peptide | Authors: | Berntsson, R.P.-A, Doeven, M.K, Duurkens, R.H, Sengupta, D, Marrink, S.-J, Thunnissen, A.-M, Poolman, B, Slotboom, D.-J. | Deposit date: | 2008-07-11 | Release date: | 2009-03-31 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | The structural basis for peptide selection by the transport receptor OppA Embo J., 28, 2009
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3DRF
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![BU of 3drf by Molmil](/molmil-images/mine/3drf) | Lactococcal OppA complexed with an endogenous peptide in the closed conformation | Descriptor: | Oligopeptide-binding protein oppA, endogenous peptide | Authors: | Berntsson, R.P.-A, Doeven, M.K, Duurkens, R.H, Sengupta, D, Marrink, S.-J, Thunnissen, A.-M, Poolman, B, Slotboom, D.-J. | Deposit date: | 2008-07-11 | Release date: | 2009-03-31 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.3 Å) | Cite: | The structural basis for peptide selection by the transport receptor OppA Embo J., 28, 2009
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3DRH
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![BU of 3drh by Molmil](/molmil-images/mine/3drh) | Crystal structure of Lactococcal OppA co-crystallized with Leu-enkephalin in an open conformation | Descriptor: | Oligopeptide-binding protein oppA, peptide AAAAAA | Authors: | Berntsson, R.P.-A, Doeven, M.K, Duurkens, R.H, Sengupta, D, Marrink, S.-J, Thunnissen, A.-M, Poolman, B, Slotboom, D.-J. | Deposit date: | 2008-07-11 | Release date: | 2009-03-31 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | The structural basis for peptide selection by the transport receptor OppA Embo J., 28, 2009
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3DRK
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![BU of 3drk by Molmil](/molmil-images/mine/3drk) | Crystal structure of Lactococcal OppA co-crystallized with Neuropeptide S in an open conformation | Descriptor: | Neuropeptide S, Oligopeptide-binding protein oppA | Authors: | Berntsson, R.P.-A, Doeven, M.K, Duurkens, R.H, Sengupta, D, Marrink, S.-J, Thunnissen, A.-M, Poolman, B, Slotboom, D.-J. | Deposit date: | 2008-07-11 | Release date: | 2009-03-31 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | The structural basis for peptide selection by the transport receptor OppA Embo J., 28, 2009
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5LV0
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![BU of 5lv0 by Molmil](/molmil-images/mine/5lv0) | Structure of Human Neurolysin (E475Q) in complex with amyloid-beta 35-40 peptide product | Descriptor: | CHLORIDE ION, GLY-VAL-VAL amyloid 35-40 fragment, Neurolysin, ... | Authors: | Masuyer, G, Berntsson, R.P.-A, Teixeira, P.F, Kmiec, B, Glaser, E, Stenmark, P. | Deposit date: | 2016-09-12 | Release date: | 2017-12-06 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Structural and functional analysis of Neurolysin, a new component of the mitochondrial peptidolytic network To Be Published
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4FAJ
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![BU of 4faj by Molmil](/molmil-images/mine/4faj) | Structure and mode of peptide binding of pheromone receptor PrgZ | Descriptor: | GLYCEROL, PrgZ, Sex pheromone cCF10, ... | Authors: | Berntsson, R.P.-A, Schuurman-Wolters, G.K, Dunny, K, Slotboom, D.J, Poolman, B. | Deposit date: | 2012-05-22 | Release date: | 2012-09-12 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structure and Mode of Peptide Binding of Pheromone Receptor PrgZ. J.Biol.Chem., 287, 2012
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4DVE
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![BU of 4dve by Molmil](/molmil-images/mine/4dve) | Crystal structure at 2.1 A of the S-component for biotin from an ECF-type ABC transporter | Descriptor: | BIOTIN, Biotin transporter BioY, nonyl beta-D-glucopyranoside | Authors: | Berntsson, R.P.-A, ter Beek, J, Majsnerowska, M, Duurkens, R, Puri, P, Poolman, B, Slotboom, D.J. | Deposit date: | 2012-02-23 | Release date: | 2012-08-29 | Last modified: | 2020-07-29 | Method: | X-RAY DIFFRACTION (2.09 Å) | Cite: | Structural divergence of paralogous S components from ECF-type ABC transporters. Proc.Natl.Acad.Sci.USA, 109, 2012
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4ISR
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![BU of 4isr by Molmil](/molmil-images/mine/4isr) | Binding domain of Botulinum neurotoxin DC in complex with rat synaptotagmin II | Descriptor: | Neurotoxin, SULFATE ION, Synaptotagmin-2 | Authors: | Berntsson, R.P.-A, Peng, L, Svensson, L.M, Dong, M, Stenmark, P. | Deposit date: | 2013-01-17 | Release date: | 2013-08-14 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (2.59 Å) | Cite: | Crystal Structures of Botulinum Neurotoxin DC in Complex with Its Protein Receptors Synaptotagmin I and II. Structure, 21, 2013
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5TPB
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![BU of 5tpb by Molmil](/molmil-images/mine/5tpb) | |
4ISQ
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![BU of 4isq by Molmil](/molmil-images/mine/4isq) | Binding domain of Botulinum neurotoxin DC in complex with human synaptotagmin I | Descriptor: | GLYCEROL, Neurotoxin, SULFATE ION, ... | Authors: | Berntsson, R.P.-A, Peng, L, Svensson, L.M, Dong, M, Stenmark, P. | Deposit date: | 2013-01-17 | Release date: | 2013-08-14 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (2.65 Å) | Cite: | Crystal Structures of Botulinum Neurotoxin DC in Complex with Its Protein Receptors Synaptotagmin I and II. Structure, 21, 2013
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5TPC
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![BU of 5tpc by Molmil](/molmil-images/mine/5tpc) | Binding domain of BoNT/A complexed with ganglioside | Descriptor: | Botulinum neurotoxin type A, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose | Authors: | Berntsson, R.P.-A, Svensson, L.M, Stenmark, P. | Deposit date: | 2016-10-20 | Release date: | 2017-01-18 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Glycans Confer Specificity to the Recognition of Ganglioside Receptors by Botulinum Neurotoxin A. J. Am. Chem. Soc., 139, 2017
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5LR0
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![BU of 5lr0 by Molmil](/molmil-images/mine/5lr0) | Binding domain of Botulinum Neurotoxin DC in complex with SialylT | Descriptor: | Botulinum neurotoxin D/C protein, N-acetyl-alpha-neuraminic acid, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose, ... | Authors: | Berntsson, R.P.-A, Stenmark, P. | Deposit date: | 2016-08-18 | Release date: | 2017-08-30 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (2.59 Å) | Cite: | Structural basis for the unique ganglioside and cell membrane recognition mechanism of botulinum neurotoxin DC. Nat Commun, 8, 2017
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3RYB
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![BU of 3ryb by Molmil](/molmil-images/mine/3ryb) | Lactococcal OppA complexed with SLSQSLSQS | Descriptor: | Oligopeptide, Oligopeptide-binding protein oppA | Authors: | Berntsson, R.P.-A, Thunnissen, A.-M.W.H, Poolman, B, Slotboom, D.-J. | Deposit date: | 2011-05-11 | Release date: | 2011-06-29 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Importance of a Hydrophobic Pocket for Peptide Binding in Lactococcal OppA. J.Bacteriol., 193, 2011
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3RYA
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![BU of 3rya by Molmil](/molmil-images/mine/3rya) | Lactococcal OppA complexed with SLSQLSSQS | Descriptor: | Oligopeptide, Oligopeptide-binding protein oppA | Authors: | Berntsson, R.P.-A, Thunnissen, A.-M.W.H, Poolman, B, Slotboom, D.-J. | Deposit date: | 2011-05-11 | Release date: | 2011-06-29 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Importance of a Hydrophobic Pocket for Peptide Binding in Lactococcal OppA. J.Bacteriol., 193, 2011
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4KA7
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![BU of 4ka7 by Molmil](/molmil-images/mine/4ka7) | Structure of Organellar OligoPeptidase (E572Q) in complex with an endogenous substrate | Descriptor: | CHLORIDE ION, GLYCEROL, Oligopeptidase A, ... | Authors: | Berntsson, R.P.-A, Kmiec, B, Teixeira, P.F, Svensson, L.M, Bakali, A, Glaser, E, Stenmark, P. | Deposit date: | 2013-04-22 | Release date: | 2013-09-18 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Organellar oligopeptidase (OOP) provides a complementary pathway for targeting peptide degradation in mitochondria and chloroplasts. Proc. Natl. Acad. Sci. U.S.A., 110, 2013
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4LHF
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![BU of 4lhf by Molmil](/molmil-images/mine/4lhf) | Crystal structure of a DNA binding protein from phage P2 | Descriptor: | Regulatory protein cox | Authors: | Berntsson, R.P.-A, Odegrip, R, Sehlen, W, Skaar, K, Svensson, L.M, Massad, T, Haggard-Ljungquist, E, Stenmark, P. | Deposit date: | 2013-07-01 | Release date: | 2014-03-05 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (2.401 Å) | Cite: | Structural insight into DNA binding and oligomerization of the multifunctional Cox protein of bacteriophage P2. Nucleic Acids Res., 42, 2014
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4N1T
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![BU of 4n1t by Molmil](/molmil-images/mine/4n1t) | Structure of human MTH1 in complex with TH287 | Descriptor: | 6-(2,3-dichlorophenyl)-N~4~-methylpyrimidine-2,4-diamine, 7,8-dihydro-8-oxoguanine triphosphatase, SULFATE ION | Authors: | Berntsson, R.P.-A, Jemth, A, Gustafsson, R, Svensson, L.M, Helleday, T, Stenmark, P. | Deposit date: | 2013-10-04 | Release date: | 2014-04-16 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | MTH1 inhibition eradicates cancer by preventing sanitation of the dNTP pool. Nature, 508, 2014
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4KA8
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![BU of 4ka8 by Molmil](/molmil-images/mine/4ka8) | Structure of Organellar OligoPeptidase | Descriptor: | CHLORIDE ION, GLYCEROL, Oligopeptidase A, ... | Authors: | Berntsson, R.P.-A, Kmiec, B, Teixeira, P.F, Svensson, L.M, Bakali, A, Glaser, E, Stenmark, P. | Deposit date: | 2013-04-22 | Release date: | 2013-09-18 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Organellar oligopeptidase (OOP) provides a complementary pathway for targeting peptide degradation in mitochondria and chloroplasts. Proc. Natl. Acad. Sci. U.S.A., 110, 2013
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4N1U
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![BU of 4n1u by Molmil](/molmil-images/mine/4n1u) | Structure of human MTH1 in complex with TH588 | Descriptor: | 7,8-dihydro-8-oxoguanine triphosphatase, N~4~-cyclopropyl-6-(2,3-dichlorophenyl)pyrimidine-2,4-diamine, SULFATE ION | Authors: | Berntsson, R.P.-A, Jemth, A, Gustafsson, R, Svensson, L.M, Helleday, T, Stenmark, P. | Deposit date: | 2013-10-04 | Release date: | 2014-04-16 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | MTH1 inhibition eradicates cancer by preventing sanitation of the dNTP pool. Nature, 508, 2014
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3FTO
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![BU of 3fto by Molmil](/molmil-images/mine/3fto) | Crystal structure of OppA in a open conformation | Descriptor: | Oligopeptide-binding protein oppA | Authors: | Berntsson, R.P.-A, Oktaviani, N.A, Fusetti, F, Thunnissen, A.-M.W.H, Poolman, B, Slotboom, D.-J. | Deposit date: | 2009-01-13 | Release date: | 2009-03-31 | Last modified: | 2017-11-01 | Method: | X-RAY DIFFRACTION (2.38 Å) | Cite: | Selenomethionine incorporation in proteins expressed in Lactococcus lactis. Protein Sci., 18, 2009
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8S0U
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![BU of 8s0u by Molmil](/molmil-images/mine/8s0u) | |
8S4T
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![BU of 8s4t by Molmil](/molmil-images/mine/8s4t) | |
8S4S
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![BU of 8s4s by Molmil](/molmil-images/mine/8s4s) | PrgE from plasmid pCF10 | Descriptor: | POTASSIUM ION, PrgE, SULFATE ION | Authors: | Breidenstein, A, Berntsson, R.P.-A. | Deposit date: | 2024-02-22 | Release date: | 2024-05-29 | Last modified: | 2024-07-03 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | PrgE: an OB-fold protein from plasmid pCF10 with striking differences to prototypical bacterial SSBs. Life Sci Alliance, 7, 2024
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