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5SY1
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BU of 5sy1 by Molmil
Structure of the STRA6 receptor for retinol uptake in complex with calmodulin
Descriptor: CALCIUM ION, CHOLESTEROL, Calmodulin, ...
Authors:Clarke, O.B, Chen, Y, Mancia, F.
Deposit date:2016-08-10
Release date:2016-08-24
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure of the STRA6 receptor for retinol uptake.
Science, 353, 2016
8EKL
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BU of 8ekl by Molmil
Clostridioides difficile binary toxin translocase CDTb wild-type after calcium depletion from receptor binding domain 1 (RBD1) - Class 1
Descriptor: ADP-ribosyltransferase binding component, CALCIUM ION
Authors:Abeyawardhane, D.L, Pozharski, E.
Deposit date:2022-09-21
Release date:2023-09-27
Method:ELECTRON MICROSCOPY (3.06 Å)
Cite:Calcium-mediated Pore Formation of Clostridioides difficile Binary Toxin
To Be Published
8EKM
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BU of 8ekm by Molmil
Clostridioides difficile binary toxin translocase CDTb double mutant - D623A D734A
Descriptor: ADP-ribosyltransferase binding component, CALCIUM ION
Authors:Abeyawardhane, D.L, Pozharski, E.
Deposit date:2022-09-21
Release date:2023-09-27
Method:ELECTRON MICROSCOPY (3.56 Å)
Cite:Calcium-mediated Pore Formation of Clostridioides difficile Binary Toxin
To Be Published
8EKK
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BU of 8ekk by Molmil
Clostridioides difficile binary toxin translocase CDTb wild-type after calcium depletion from receptor binding domain 1 (RBD1) - Class 2
Descriptor: ADP-ribosyltransferase binding component, CALCIUM ION
Authors:Abeyawardhane, D.L, Pozharski, E.
Deposit date:2022-09-21
Release date:2023-09-27
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:Calcium-mediated Pore Formation of Clostridioides difficile Binary Toxin
To Be Published
3CR5
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BU of 3cr5 by Molmil
X-ray structure of bovine Pnt-Zn(2+),Ca(2+)-S100B
Descriptor: 1,5-BIS(4-AMIDINOPHENOXY)PENTANE, CALCIUM ION, Protein S100-B, ...
Authors:Charpentier, T.H.
Deposit date:2008-04-04
Release date:2008-06-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Divalent metal ion complexes of S100B in the absence and presence of pentamidine.
J.Mol.Biol., 382, 2008
3CR2
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BU of 3cr2 by Molmil
X-ray structure of bovine Zn(2+),Ca(2+)-S100B
Descriptor: CALCIUM ION, Protein S100-B, ZINC ION
Authors:Charpentier, T.H.
Deposit date:2008-04-04
Release date:2008-06-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Divalent metal ion complexes of S100B in the absence and presence of pentamidine.
J.Mol.Biol., 382, 2008
3CR4
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BU of 3cr4 by Molmil
X-ray structure of bovine Pnt,Ca(2+)-S100B
Descriptor: 1,5-BIS(4-AMIDINOPHENOXY)PENTANE, CALCIUM ION, Protein S100-B
Authors:Charpentier, T.H.
Deposit date:2008-04-04
Release date:2008-08-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Divalent metal ion complexes of S100B in the absence and presence of pentamidine.
J.Mol.Biol., 382, 2008
6UAI
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BU of 6uai by Molmil
Imidazole-triggered RAS-specific subtilisin SUBT_BACAM complexed with YSAM peptide
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Toth, E.A, Bryan, P.N, Orban, J.
Deposit date:2019-09-10
Release date:2020-09-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Engineering subtilisin proteases that specifically degrade active RAS.
Commun Biol, 4, 2021
6UAO
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BU of 6uao by Molmil
Imidazole-triggered RAS-specific subtilisin SUBT_BACAM complexed with the peptide EEYSAM
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Peptide EEYSAM, ...
Authors:Toth, E.A, Bryan, P.N, Orban, J.
Deposit date:2019-09-11
Release date:2020-09-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Engineering subtilisin proteases that specifically degrade active RAS.
Commun Biol, 4, 2021
6UBE
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BU of 6ube by Molmil
Azide-triggered subtilisin SUBT_BACAM complexed with the peptide LFRAL
Descriptor: AZIDE ION, GLYCEROL, Peptide LFRAL, ...
Authors:Toth, E.A, Bryan, P.N, Orban, J, Gallagher, D.T, Custer, G.
Deposit date:2019-09-11
Release date:2020-09-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Engineering subtilisin proteases that specifically degrade active RAS.
Commun Biol, 4, 2021
6U9L
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BU of 6u9l by Molmil
Imidazole-triggered RAS-specific subtilisin SUBT_BACAM
Descriptor: GLYCEROL, POTASSIUM ION, SUBTILISIN BPN', ...
Authors:Toth, E.A, Bryan, P.N, Orban, J.
Deposit date:2019-09-09
Release date:2020-09-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Engineering subtilisin proteases that specifically degrade active RAS.
Commun Biol, 4, 2021
6UWI
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BU of 6uwi by Molmil
Crystal structure of the Clostridium difficile translocase CDTb
Descriptor: ADP-ribosyltransferase binding component, CALCIUM ION
Authors:Pozharski, E.
Deposit date:2019-11-05
Release date:2020-01-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Structure of the cell-binding component of theClostridium difficilebinary toxin reveals a di-heptamer macromolecular assembly.
Proc.Natl.Acad.Sci.USA, 117, 2020
6UWT
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BU of 6uwt by Molmil
Clostridium difficile binary toxin translocase CDTb tetradecamer in symmetric conformation
Descriptor: ADP-ribosyltransferase binding component, CALCIUM ION
Authors:Xu, X, Pozharski, E, des Georges, A.
Deposit date:2019-11-05
Release date:2020-01-22
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure of the cell-binding component of theClostridium difficilebinary toxin reveals a di-heptamer macromolecular assembly.
Proc.Natl.Acad.Sci.USA, 117, 2020
6UWR
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BU of 6uwr by Molmil
Clostridium difficile binary toxin translocase CDTb in asymmetric tetradecamer conformation
Descriptor: ADP-ribosyltransferase binding component, CALCIUM ION
Authors:Xu, X, Pozharski, E, des Georges, A.
Deposit date:2019-11-05
Release date:2020-01-22
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structure of the cell-binding component of theClostridium difficilebinary toxin reveals a di-heptamer macromolecular assembly.
Proc.Natl.Acad.Sci.USA, 117, 2020
6UWO
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BU of 6uwo by Molmil
Crystal structure of receptor binding domain 2 from Clostridium difficile translocase CDTb
Descriptor: ADP-ribosyltransferase binding component
Authors:Pozharski, E.
Deposit date:2019-11-05
Release date:2020-01-22
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the cell-binding component of theClostridium difficilebinary toxin reveals a di-heptamer macromolecular assembly.
Proc.Natl.Acad.Sci.USA, 117, 2020
2Q91
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BU of 2q91 by Molmil
Structure of the Ca2+-Bound Activated Form of the S100A4 Metastasis Factor
Descriptor: CALCIUM ION, S100A4 Metastasis Factor
Authors:Malashkevich, V.N, Knight, D, Ramagopal, U.A, Almo, S.C, Bresnick, A.R.
Deposit date:2007-06-12
Release date:2008-02-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Structure of Ca(2+)-Bound S100A4 and Its Interaction with Peptides Derived from Nonmuscle Myosin-IIA.
Biochemistry, 47, 2008
3KO0
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BU of 3ko0 by Molmil
Structure of the tfp-ca2+-bound activated form of the s100a4 Metastasis factor
Descriptor: 10-[3-(4-METHYL-PIPERAZIN-1-YL)-PROPYL]-2-TRIFLUOROMETHYL-10H-PHENOTHIAZINE, CALCIUM ION, Protein S100-A4
Authors:Malashkevich, V.N, Dulyaninova, N.G, Knight, D, Almo, S.C, Bresnick, A.R.
Deposit date:2009-11-12
Release date:2010-05-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Phenothiazines inhibit S100A4 function by inducing protein oligomerization.
Proc.Natl.Acad.Sci.USA, 107, 2010
8EGV
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BU of 8egv by Molmil
Co-crystal structure of Chaetomium glucosidase with compound 12
Descriptor: (2R,3R,4R,5S)-1-{2-[4-(2-{[(5M)-3-chloro-5-(1,2,4-oxadiazol-3-yl)phenyl]amino}ethyl)phenyl]ethyl}-2-(hydroxymethyl)piperidine-3,4,5-triol, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Karade, S.S, Mariuzza, R.A.
Deposit date:2022-09-13
Release date:2023-02-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structure-Based Design of Potent Iminosugar Inhibitors of Endoplasmic Reticulum alpha-Glucosidase I with Anti-SARS-CoV-2 Activity.
J.Med.Chem., 66, 2023
8E4I
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BU of 8e4i by Molmil
Co-crystal structure of Chaetomium glucosidase with compound 6
Descriptor: (2R,3R,4R,5S)-2-(hydroxymethyl)-1-(6-{[(4P)-4-(5-methyl-1,2,4-oxadiazol-3-yl)-2-nitrophenyl]amino}hexyl)piperidine-3,4,5-triol, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Karade, S.S, Mariuzza, R.A.
Deposit date:2022-08-18
Release date:2023-02-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure-Based Design of Potent Iminosugar Inhibitors of Endoplasmic Reticulum alpha-Glucosidase I with Anti-SARS-CoV-2 Activity.
J.Med.Chem., 66, 2023
8E4K
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BU of 8e4k by Molmil
Co-crystal structure of Chaetomium glucosidase with compound 7
Descriptor: (2R,3R,4R,5S)-2-(hydroxymethyl)-1-[6-({(4M)-4-[2-(morpholin-4-yl)pyrimidin-4-yl]-2-nitrophenyl}amino)hexyl]piperidine-3,4,5-triol, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Karade, S.S, Mariuzza, R.A.
Deposit date:2022-08-18
Release date:2023-02-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure-Based Design of Potent Iminosugar Inhibitors of Endoplasmic Reticulum alpha-Glucosidase I with Anti-SARS-CoV-2 Activity.
J.Med.Chem., 66, 2023
8E3P
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BU of 8e3p by Molmil
Co-crystal structure of Chaetomium glucosidase with compound 5
Descriptor: (2S,3S,4S,5R)-2-(hydroxymethyl)-1-{6-[3-nitro-5-(pyridin-4-yl)anilino]hexyl}piperidine-3,4,5-triol, 2-acetamido-2-deoxy-beta-D-glucopyranose, Chaetomium alpha glucosidase, ...
Authors:Karade, S.S, Mariuzza, R.A.
Deposit date:2022-08-17
Release date:2023-02-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure-Based Design of Potent Iminosugar Inhibitors of Endoplasmic Reticulum alpha-Glucosidase I with Anti-SARS-CoV-2 Activity.
J.Med.Chem., 66, 2023
8E6G
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BU of 8e6g by Molmil
Co-crystal structure of Chaetomium glucosidase with compound 10
Descriptor: (2R,3R,4R,5S)-1-(6-{[(5M)-3-cyclopropyl-5-(pyridazin-3-yl)phenyl]amino}hexyl)-2-(hydroxymethyl)piperidine-3,4,5-triol, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Karade, S.S, Mariuzza, R.A.
Deposit date:2022-08-22
Release date:2023-02-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure-Based Design of Potent Iminosugar Inhibitors of Endoplasmic Reticulum alpha-Glucosidase I with Anti-SARS-CoV-2 Activity.
J.Med.Chem., 66, 2023
8EKN
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BU of 8ekn by Molmil
Co-crystal structure of Chaetomium glucosidase with compound 15
Descriptor: (2R,3R,4R,5S)-2-(hydroxymethyl)-1-{[4-({[(5P)-3-methyl-5-(pyridazin-3-yl)phenyl]amino}methyl)phenyl]methyl}piperidine-3,4,5-triol, 2-acetamido-2-deoxy-beta-D-glucopyranose, Chaetomium alpha glucosidase, ...
Authors:Karade, S.S, Mariuzza, R.A.
Deposit date:2022-09-21
Release date:2023-02-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structure-Based Design of Potent Iminosugar Inhibitors of Endoplasmic Reticulum alpha-Glucosidase I with Anti-SARS-CoV-2 Activity.
J.Med.Chem., 66, 2023
8EHP
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BU of 8ehp by Molmil
Co-crystal structure of Chaetomium glucosidase with compound 13
Descriptor: (2R,3R,4R,5S)-2-(hydroxymethyl)-1-[(4-{[4-(morpholin-4-yl)anilino]methyl}phenyl)methyl]piperidine-3,4,5-triol, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Karade, S.S, Mariuzza, R.A.
Deposit date:2022-09-14
Release date:2023-02-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Structure-Based Design of Potent Iminosugar Inhibitors of Endoplasmic Reticulum alpha-Glucosidase I with Anti-SARS-CoV-2 Activity.
J.Med.Chem., 66, 2023
8E4Z
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BU of 8e4z by Molmil
Co-crystal structure of Chaetomium glucosidase with compound 8
Descriptor: (2R,3R,4R,5S)-1-(6-{[(4P)-4-(5-cyclobutyl-1,2,4-oxadiazol-3-yl)-2-nitrophenyl]amino}hexyl)-2-(hydroxymethyl)piperidine-3,4,5-triol, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Karade, S.S, Mariuzza, R.A.
Deposit date:2022-08-19
Release date:2023-02-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Structure-Based Design of Potent Iminosugar Inhibitors of Endoplasmic Reticulum alpha-Glucosidase I with Anti-SARS-CoV-2 Activity.
J.Med.Chem., 66, 2023

220113

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