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3T57
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BU of 3t57 by Molmil
Activity and Crystal Structure of Arabidopsis UDP-N-acetylglucosamine acyltransferase
分子名称: UDP-N-acetylglucosamine O-acyltransferase domain-containing protein
著者Raetz, C.R.H, Joo, S.H.
登録日2011-07-26
公開日2012-05-23
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Activity and Crystal Structure of Arabidopsis thalianaUDP-N-Acetylglucosamine Acyltransferase.
Biochemistry, 51, 2012
2JT2
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BU of 2jt2 by Molmil
Solution Structure of the Aquifex aeolicus LpxC- CHIR-090 complex
分子名称: N-{(1S,2R)-2-hydroxy-1-[(hydroxyamino)carbonyl]propyl}-4-{[4-(morpholin-4-ylmethyl)phenyl]ethynyl}benzamide, UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase, ZINC ION
著者Barb, A.W, Jiang, L, Raetz, C.R.H, Zhou, P.
登録日2007-07-18
公開日2007-12-04
最終更新日2021-10-20
実験手法SOLUTION NMR
主引用文献Structure of the deacetylase LpxC bound to the antibiotic CHIR-090: Time-dependent inhibition and specificity in ligand binding
Proc.Natl.Acad.Sci.Usa, 104, 2007
3EH0
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BU of 3eh0 by Molmil
Crystal Structure of LpxD from Escherichia coli
分子名称: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
著者Bartling, C.M, Raetz, C.R.H.
登録日2008-09-11
公開日2009-08-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure and acyl chain selectivity of Escherichia coli LpxD, the N-acyltransferase of lipid A biosynthesis
Biochemistry, 48, 2009
2AQ9
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Structure of E. coli LpxA with a bound peptide that is competitive with acyl-ACP
分子名称: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, DIMETHYL SULFOXIDE, PHOSPHATE ION, ...
著者Williams, A.H, Immormino, R.M, Gewirth, D.T, Raetz, C.R.
登録日2005-08-17
公開日2006-06-27
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of UDP-N-acetylglucosamine acyltransferase with a bound antibacterial pentadecapeptide.
Proc.Natl.Acad.Sci.Usa, 103, 2006
3HSQ
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BU of 3hsq by Molmil
Structural Basis for the Sugar Nucleotide and Acyl Chain Selectivity of Leptospira interrogans LpxA
分子名称: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase
著者Robins, L.I, Williams, A.H, Raetz, C.R.
登録日2009-06-10
公開日2009-09-01
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis for the sugar nucleotide and acyl-chain selectivity of Leptospira interrogans LpxA.
Biochemistry, 48, 2009
4EHY
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BU of 4ehy by Molmil
Crystal structure of LpxK from Aquifex aeolicus in complex with ADP/Mg2+ at 2.2 angstrom resolution
分子名称: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, GLYCEROL, ...
著者Emptage, R.P, Daughtry, K.D, Pemble IV, C.W, Raetz, C.R.H.
登録日2012-04-04
公開日2012-08-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.199 Å)
主引用文献Crystal structure of LpxK, the 4'-kinase of lipid A biosynthesis and atypical P-loop kinase functioning at the membrane interface.
Proc.Natl.Acad.Sci.USA, 109, 2012
4EHW
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Crystal structure of LpxK from Aquifex aeolicus at 2.3 angstrom resolution
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, GLYCEROL, Tetraacyldisaccharide 4'-kinase
著者Emptage, R.P, Daughtry, K.D, Pemble IV, C.W, Raetz, C.R.H.
登録日2012-04-04
公開日2012-08-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of LpxK, the 4'-kinase of lipid A biosynthesis and atypical P-loop kinase functioning at the membrane interface.
Proc.Natl.Acad.Sci.USA, 109, 2012
4EHX
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Crystal structure of LpxK from Aquifex aeolicus at 1.9 angstrom resolution
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, ...
著者Emptage, R.P, Daughtry, K.D, Pemble IV, C.W, Raetz, C.R.H.
登録日2012-04-04
公開日2012-08-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of LpxK, the 4'-kinase of lipid A biosynthesis and atypical P-loop kinase functioning at the membrane interface.
Proc.Natl.Acad.Sci.USA, 109, 2012
5YW0
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BU of 5yw0 by Molmil
Crystal structure of the Kdo hydroxylase KdoO, a non-heme Fe(II) alphaketoglutarate dependent dioxygenase in complex with succinate and Fe(III)
分子名称: ACETATE ION, FE (III) ION, GLYCEROL, ...
著者Chung, H.S, Pemble, C.W, Joo, S.H, Raetz, C.R.
登録日2017-11-28
公開日2018-09-05
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Biochemical and Structural Insights into an Fe(II)/ alpha-Ketoglutarate/O2-Dependent Dioxygenase, Kdo 3-Hydroxylase (KdoO).
J. Mol. Biol., 430, 2018
5YKA
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Crystal structure of the Kdo hydroxylase KdoO, a non-heme Fe(II) alphaketoglutarate dependent dioxygenase in complex with cobalt(II)
分子名称: ACETATE ION, CHLORIDE ION, COBALT (II) ION, ...
著者Chung, H.S, Pemble, C.W, Joo, S.H, Raetz, C.R.
登録日2017-10-12
公開日2018-09-05
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.448 Å)
主引用文献Biochemical and Structural Insights into an Fe(II)/ alpha-Ketoglutarate/O2-Dependent Dioxygenase, Kdo 3-Hydroxylase (KdoO).
J. Mol. Biol., 430, 2018
5YVZ
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BU of 5yvz by Molmil
Crystal structure of the Kdo hydroxylase KdoO, a non-heme Fe(II) alphaketoglutarate dependent dioxygenase in complex with alphaketoglutarate and Fe(III)
分子名称: 2-OXOGLUTARIC ACID, ACETATE ION, FE (III) ION, ...
著者Chung, H.S, Pemble, C.W, Joo, S.H, Raetz, C.R.
登録日2017-11-28
公開日2018-09-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Biochemical and Structural Insights into an Fe(II)/ alpha-Ketoglutarate/O2-Dependent Dioxygenase, Kdo 3-Hydroxylase (KdoO).
J. Mol. Biol., 430, 2018
4IHG
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BU of 4ihg by Molmil
Chasing Acyl Carrier Protein Through a Catalytic Cycle of Lipid A Production
分子名称: 3-HYDROXY-TETRADECANOIC ACID, 4'-PHOSPHOPANTETHEINE, Acyl carrier protein, ...
著者Masoudi, A, Raetz, C.R.H, Pemble, C.W.
登録日2012-12-18
公開日2013-11-13
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献Chasing acyl carrier protein through a catalytic cycle of lipid A production.
Nature, 505, 2014
4IHH
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BU of 4ihh by Molmil
Chasing Acyl Carrier Protein Through a Catalytic Cycle of Lipid A Production
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4'-PHOSPHOPANTETHEINE, Acyl carrier protein, ...
著者Masoudi, A, Raetz, C.R.H, Pemble, C.W.
登録日2012-12-18
公開日2013-11-13
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2.132 Å)
主引用文献Chasing acyl carrier protein through a catalytic cycle of lipid A production.
Nature, 505, 2014
4IHF
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Chasing Acyl Carrier Protein Through a Catalytic Cycle of Lipid A Production
分子名称: Acyl carrier protein, CHLORIDE ION, S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] (3R)-3-hydroxytetradecanethioate, ...
著者Masoudi, A, Raetz, C.R.H, Pemble, C.W.
登録日2012-12-18
公開日2013-11-13
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Chasing acyl carrier protein through a catalytic cycle of lipid A production.
Nature, 505, 2014
4GGM
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BU of 4ggm by Molmil
Structure of LpxI
分子名称: (R)-((2R,3S,4R,5R,6R)-3-HYDROXY-2-(HYDROXYMETHYL)-5-((R)-3-HYDROXYTETRADECANAMIDO)-6-(PHOSPHONOOXY)TETRAHYDRO-2H-PYRAN-4-YL) 3-HYDROXYTETRADECANOATE, MAGNESIUM ION, UDP-2,3-diacylglucosamine pyrophosphatase LpxI
著者Metzger IV, L.E, Lee, J.K, Finer-Moore, J.S, Raetz, C.R.H, Stroud, R.M, Center for Structures of Membrane Proteins (CSMP)
登録日2012-08-06
公開日2012-10-03
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.897 Å)
主引用文献LpxI structures reveal how a lipid A precursor is synthesized.
Nat.Struct.Mol.Biol., 19, 2012
4ITL
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BU of 4itl by Molmil
Crystal structure of LpxK from Aquifex aeolicus in complex with AMP-PCP at 2.1 angstrom resolution
分子名称: GLYCEROL, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Tetraacyldisaccharide 4'-kinase
著者Emptage, R.P, Pemble IV, C.W, York, J.D, Raetz, C.R.H, Zhou, P.
登録日2013-01-18
公開日2013-04-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Mechanistic Characterization of the Tetraacyldisaccharide-1-phosphate 4'-Kinase LpxK Involved in Lipid A Biosynthesis.
Biochemistry, 52, 2013
4ITN
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Crystal structure of "compact P-loop" LpxK from Aquifex aeolicus in complex with chloride at 2.2 angstrom resolution
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, GLYCEROL, ...
著者Emptage, R.P, Pemble IV, C.W, York, J.D, Raetz, C.R.H, Zhou, P.
登録日2013-01-18
公開日2013-04-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.1912 Å)
主引用文献Mechanistic Characterization of the Tetraacyldisaccharide-1-phosphate 4'-Kinase LpxK Involved in Lipid A Biosynthesis.
Biochemistry, 52, 2013
4ITM
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Crystal structure of "apo" form LpxK from Aquifex aeolicus in complex with ATP at 2.2 angstrom resolution
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Emptage, R.P, Pemble IV, C.W, York, J.D, Raetz, C.R.H, Zhou, P.
登録日2013-01-18
公開日2013-04-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.1994 Å)
主引用文献Mechanistic Characterization of the Tetraacyldisaccharide-1-phosphate 4'-Kinase LpxK Involved in Lipid A Biosynthesis.
Biochemistry, 52, 2013
2QIV
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BU of 2qiv by Molmil
Structural basis for the acyl chain selectivity and mechanism of UDP-N-acetylglucosamine acyltransferase
分子名称: UDP-N-acetylglucosamine acyltransferase, uridine-5'-diphosphate-3-O-(R-3-hydroxydecanoyl)-N-acetyl-D-glucosamine
著者Williams, A.H, Raetz, C.R.H.
登録日2007-07-05
公開日2007-10-02
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural basis for the acyl chain selectivity and mechanism of UDP-N-acetylglucosamine acyltransferase
Proc.Natl.Acad.Sci.Usa, 104, 2007
2QIA
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Structural basis for the acyl chain selectivity and mechanism of UDP-N-acetylglucosamine Acyltransferase
分子名称: UDP-N-acetylglucosamine acyltransferase, uridine-5'-diphosphate-3-O-(R-3-hydroxymyristoyl)-N-acetyl-D-glucosamine
著者Williams, A.H, Raetz, C.R.H.
登録日2007-07-03
公開日2007-10-02
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Structural basis for the acyl chain selectivity and mechanism of UDP-N-acetylglucosamine acyltransferase
Proc.Natl.Acad.Sci.Usa, 104, 2007
4J6E
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BU of 4j6e by Molmil
Structure of LPXI D225A Mutant
分子名称: (2R,3R,4R,5S,6R)-2-{[(S)-{[(S)-{[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}-5-hydroxy-6-(hydroxymethyl)-3-{[(3R)-3-hydroxytetradecanoyl]amino}tetrahydro-2H-pyran-4-yl (3R)-3-hydroxytetradecanoate, UDP-2,3-diacylglucosamine pyrophosphatase LpxI
著者Metzger IV, L.E, Lee, J.K, Finer-Moore, J.S, Raetz, C.R.H, Stroud, R.M, Center for Structures of Membrane Proteins (CSMP)
登録日2013-02-11
公開日2013-05-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献LpxI structures reveal how a lipid A precursor is synthesized.
Nat.Struct.Mol.Biol., 19, 2012
1YUC
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BU of 1yuc by Molmil
Human Nuclear Receptor Liver Receptor Homologue-1, LRH-1, Bound to Phospholipid and a Fragment of Human SHP
分子名称: GLYCEROL, L-ALPHA-PHOSPHATIDYL-BETA-OLEOYL-GAMMA-PALMITOYL-PHOSPHATIDYLETHANOLAMINE, Nuclear receptor 0B2, ...
著者Ortlund, E.A, Yoonkwang, L, Solomon, I.H, Hager, J.M, Safi, R, Choi, Y, Guan, Z, Tripathy, A, Raetz, C.R.H, McDonnell, D.P, Moore, D.D, Redinbo, M.R.
登録日2005-02-13
公開日2005-03-01
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Modulation of human nuclear receptor LRH-1 activity by phospholipids and SHP
Nat.Struct.Mol.Biol., 12, 2005
1XXE
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RDC refined solution structure of the AaLpxC/TU-514 complex
分子名称: 1,5-ANHYDRO-2-C-(CARBOXYMETHYL-N-HYDROXYAMIDE)-2-DEOXY-3-O-MYRISTOYL-D-GLUCITOL, UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase, ZINC ION
著者Coggins, B.E, McClerren, A.L, Jiang, L, Li, X, Rudolph, J, Hindsgaul, O, Raetz, C.R.H, Zhou, P.
登録日2004-11-04
公開日2004-11-23
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Refined Solution Structure of the LpxC-TU-514 Complex and pK(a) Analysis of an Active Site Histidine: Insights into the Mechanism and Inhibitor Design
Biochemistry, 44, 2005
1MM4
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BU of 1mm4 by Molmil
Solution NMR structure of the outer membrane enzyme PagP in DPC micelles
分子名称: CrcA protein
著者Hwang, P.M, Choy, W.-Y, Lo, E.I, Chen, L, Forman-Kay, J.D, Raetz, C.R.H, Prive, G.G, Bishop, R.E, Kay, L.E.
登録日2002-09-03
公開日2002-09-13
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Solution Structure and Dynamics of the Outer Membrane Enzyme PagP by NMR
Proc.Natl.Acad.Sci.USA, 99, 2002
2BLL
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BU of 2bll by Molmil
Apo-structure of the C-terminal decarboxylase domain of ArnA
分子名称: PROTEIN YFBG
著者Williams, G.J, Breazeale, S.D, Raetz, C.R.H, Naismith, J.H.
登録日2005-03-07
公開日2005-04-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure and Function of Both Domains of Arna, a Dual Function Decarboxylase and a Formyltransferase, Involved in 4-Amino-4-Deoxy-L- Arabinose Biosynthesis.
J.Biol.Chem., 280, 2005

 

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