Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2B9L
DownloadVisualize
BU of 2b9l by Molmil
Crystal structure of prophenoloxidase activating factor-II from the beetle Holotrichia diomphalia
Descriptor: CALCIUM ION, SULFATE ION, alpha-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)][alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Piao, S, Song, Y.-L, Park, S.Y, Lee, B.L, Oh, B.-H, Ha, N.-C.
Deposit date:2005-10-12
Release date:2006-01-03
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a clip-domain serine protease and functional roles of the clip domains.
Embo J., 24, 2005
5NNV
DownloadVisualize
BU of 5nnv by Molmil
Structure of a Bacillus subtilis Smc coiled coil middle fragment
Descriptor: Chromosome partition protein Smc,Chromosome partition protein Smc
Authors:Diebold-Durand, M.-L, Basquin, J, Gruber, S.
Deposit date:2017-04-10
Release date:2017-06-21
Last modified:2017-08-02
Method:X-RAY DIFFRACTION (3.295 Å)
Cite:Structure of Full-Length SMC and Rearrangements Required for Chromosome Organization.
Mol. Cell, 67, 2017
5NMO
DownloadVisualize
BU of 5nmo by Molmil
Structure of the Bacillus subtilis Smc Joint domain
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, Chromosome partition protein Smc,Chromosome partition protein Smc, ...
Authors:Diebold-Durand, M.-L, Basquin, J, Gruber, S.
Deposit date:2017-04-06
Release date:2017-06-21
Last modified:2017-08-02
Method:X-RAY DIFFRACTION (1.899 Å)
Cite:Structure of Full-Length SMC and Rearrangements Required for Chromosome Organization.
Mol. Cell, 67, 2017
1QLG
DownloadVisualize
BU of 1qlg by Molmil
Crystal structure of phytase with magnesium from Bacillus amyloliquefaciens
Descriptor: 3-PHYTASE, CALCIUM ION, MAGNESIUM ION
Authors:Shin, S, Ha, N.-C, Oh, B.-H.
Deposit date:1999-08-31
Release date:2000-02-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structures of a Novel, Thermostable Phytase in Partially and Fully Calcium-Loaded States
Nat.Struct.Biol., 7, 2000
4AP9
DownloadVisualize
BU of 4ap9 by Molmil
Crystal structure of phosphoserine phosphatase from T. onnurineus in complex with NDSB-201
Descriptor: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, PHOSPHOSERINE PHOSPHATASE
Authors:Jung, T.-Y, Kim, Y.-S, Song, H.-N, Woo, E.
Deposit date:2012-03-31
Release date:2012-12-26
Last modified:2013-04-17
Method:X-RAY DIFFRACTION (1.783 Å)
Cite:Identification of a Novel Ligand Binding Site in Phosphoserine Phosphatase from the Hyperthermophilic Archaeon Thermococcus Onnurineus.
Proteins, 81, 2013
4AEE
DownloadVisualize
BU of 4aee by Molmil
CRYSTAL STRUCTURE OF MALTOGENIC AMYLASE FROM S.MARINUS
Descriptor: ALPHA AMYLASE, CATALYTIC REGION
Authors:Jung, T.Y, Park, C.H, Yoon, S.M, Park, S.H, Park, K.H, Woo, E.J.
Deposit date:2012-01-10
Release date:2012-01-18
Last modified:2012-03-21
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Association of Novel Domain in Active Site of Archaic Hyperthermophilic Maltogenic Amylase from Staphylothermus Marinus.
J.Biol.Chem., 287, 2012
4ARZ
DownloadVisualize
BU of 4arz by Molmil
The crystal structure of Gtr1p-Gtr2p complexed with GTP-GDP
Descriptor: GTP-BINDING PROTEIN GTR1, GTP-BINDING PROTEIN GTR2, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2012-04-27
Release date:2012-07-25
Last modified:2012-09-05
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal Structure of the Gtr1Pgtp-Gtr2Pgdp Complex Reveals Large Structural Rearrangements Triggered by GTP-to-Gdp Conversion
J.Biol.Chem., 287, 2012
4B6J
DownloadVisualize
BU of 4b6j by Molmil
Crystal structure of phosphoserine phosphatase from T. onnurineus
Descriptor: PHOSPHOSERINE PHOSPHATASE
Authors:Jung, T.-Y, Kim, Y.-S, Song, H.-N, Woo, E.
Deposit date:2012-08-14
Release date:2012-12-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.34 Å)
Cite:Identification of a Novel Ligand Binding Site in Phosphoserine Phosphatase from the Hyperthermophilic Archaeon Thermococcus Onnurineus.
Proteins, 81, 2013
4HVZ
DownloadVisualize
BU of 4hvz by Molmil
Crystal structure of brucella abortus immunogenic BP26 protein
Descriptor: 26 kDa periplasmic immunogenic protein
Authors:Kim, D, Park, J, Oh, B, Song, J.
Deposit date:2012-11-07
Release date:2013-01-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Brucella Immunogenic BP26 Forms a Channel-like Structure.
J.Mol.Biol., 425, 2013
4DT3
DownloadVisualize
BU of 4dt3 by Molmil
Crystal structure of zinc-charged lysozyme
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
Authors:An, Y.J, Jeong, C.S, Cha, S.S.
Deposit date:2012-02-20
Release date:2012-09-12
Last modified:2013-07-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Experimental phasing using zinc anomalous scattering
Acta Crystallogr.,Sect.D, 68, 2012
6IWD
DownloadVisualize
BU of 6iwd by Molmil
The PTP domain of human PTPN14 in a complex with the CR3 domain of HPV18 E7
Descriptor: CHLORIDE ION, HPV18 E7, PHOSPHATE ION, ...
Authors:Yun, H.-Y, Kim, S.J, Ku, B.
Deposit date:2018-12-05
Release date:2019-07-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for recognition of the tumor suppressor protein PTPN14 by the oncoprotein E7 of human papillomavirus.
Plos Biol., 17, 2019
1D2Q
DownloadVisualize
BU of 1d2q by Molmil
CRYSTAL STRUCTURE OF HUMAN TRAIL
Descriptor: TNF-RELATED APOPTOSIS INDUCING LIGAND
Authors:Cha, S.-S.
Deposit date:1999-09-27
Release date:2000-02-11
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:2.8 A resolution crystal structure of human TRAIL, a cytokine with selective antitumor activity.
Immunity, 11, 1999
4N7Z
DownloadVisualize
BU of 4n7z by Molmil
Crystal structure of human Plk4 cryptic polo box (CPB) in complex with a Cep192 N-terminal fragment
Descriptor: Centrosomal protein of 192 kDa, Serine/threonine-protein kinase PLK4
Authors:Park, S.-Y, Park, J.-E, Tian, L, Kim, T.-S, Yang, W, Lee, K.S.
Deposit date:2013-10-16
Release date:2014-07-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Molecular basis for unidirectional scaffold switching of human Plk4 in centriole biogenesis.
Nat.Struct.Mol.Biol., 21, 2014
4N7V
DownloadVisualize
BU of 4n7v by Molmil
Crystal structure of human Plk4 cryptic polo box (CPB) in complex with a Cep152 N-terminal fragment
Descriptor: Centrosomal protein of 152 kDa, Serine/threonine-protein kinase PLK4
Authors:Park, S.-Y, Park, J.-E, Tian, L, Kim, T.-S, Yang, W, Lee, K.S.
Deposit date:2013-10-16
Release date:2014-07-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.758 Å)
Cite:Molecular basis for unidirectional scaffold switching of human Plk4 in centriole biogenesis.
Nat.Struct.Mol.Biol., 21, 2014
4N9J
DownloadVisualize
BU of 4n9j by Molmil
Crystal structure of the cryptic polo box domain of human Plk4
Descriptor: CHLORIDE ION, SULFATE ION, Serine/threonine-protein kinase PLK4
Authors:Ku, B, Kim, J.H, Lee, K.S, Kim, S.J.
Deposit date:2013-10-21
Release date:2014-07-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Molecular basis for unidirectional scaffold switching of human Plk4 in centriole biogenesis.
Nat.Struct.Mol.Biol., 21, 2014
1OPY
DownloadVisualize
BU of 1opy by Molmil
KSI
Descriptor: DELTA5-3-KETOSTEROID IOSMERASE
Authors:Kim, S.-W, Cha, S.-S, Cho, H.-S, Kim, J.-S, Ha, N.-C, Cho, M.-J, Choi, K.-Y, Oh, B.-H.
Deposit date:1997-05-23
Release date:1998-04-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:High-resolution crystal structures of delta5-3-ketosteroid isomerase with and without a reaction intermediate analogue.
Biochemistry, 36, 1997
1KVO
DownloadVisualize
BU of 1kvo by Molmil
HUMAN PHOSPHOLIPASE A2 COMPLEXED WITH A HIGHLY POTENT SUBSTRATE ANOLOGUE
Descriptor: 4-(S)-[(1-OXO-7-PHENYLHEPTYL)AMINO]-5-[4-(PHENYLMETHYL)PHENYLTHIO]PENTANOIC ACID, CALCIUM ION, HUMAN PHOSPHOLIPASE A2
Authors:Cha, S.-S, Abdel-Meguid, S.S, Oh, B.-H.
Deposit date:1996-07-29
Release date:1997-07-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:High-resolution X-ray crystallography reveals precise binding interactions between human nonpancreatic secreted phospholipase A2 and a highly potent inhibitor (FPL67047XX).
J.Med.Chem., 39, 1996
5Z59
DownloadVisualize
BU of 5z59 by Molmil
Crystal structure of Tk-PTP in the inactive form
Descriptor: Protein-tyrosine phosphatase
Authors:Ku, B, Yun, H.Y, Kim, S.J.
Deposit date:2018-01-17
Release date:2018-06-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.703 Å)
Cite:Structural study reveals the temperature-dependent conformational flexibility of Tk-PTP, a protein tyrosine phosphatase from Thermococcus kodakaraensis KOD1
PLoS ONE, 13, 2018
5Z5B
DownloadVisualize
BU of 5z5b by Molmil
Crystal structure of Tk-PTP in the G95A mutant form
Descriptor: CHLORIDE ION, FORMIC ACID, Protein-tyrosine phosphatase
Authors:Ku, B, Yun, H.Y, Kim, S.J.
Deposit date:2018-01-17
Release date:2018-06-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural study reveals the temperature-dependent conformational flexibility of Tk-PTP, a protein tyrosine phosphatase from Thermococcus kodakaraensis KOD1
PLoS ONE, 13, 2018
5Z5A
DownloadVisualize
BU of 5z5a by Molmil
Crystal structure of Tk-PTP in the active form
Descriptor: Protein-tyrosine phosphatase, VANADATE ION
Authors:Ku, B, Yun, H.Y, Kim, S.J.
Deposit date:2018-01-17
Release date:2018-07-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural study reveals the temperature-dependent conformational flexibility of Tk-PTP, a protein tyrosine phosphatase from Thermococcus kodakaraensis KOD1
PLoS ONE, 13, 2018
6AIL
DownloadVisualize
BU of 6ail by Molmil
CRYSTAL STRUCTURE AT 1.3 ANGSTROMS RESOLUTION OF A NOVEL UDG, UdgX, FROM Mycobacterium smegmatis
Descriptor: IRON/SULFUR CLUSTER, Uracil DNA glycosylase X
Authors:Ahn, W.C, Aroli, S, Varshney, V, Woo, E.J.
Deposit date:2018-08-24
Release date:2019-05-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.335 Å)
Cite:Covalent binding of uracil DNA glycosylase UdgX to abasic DNA upon uracil excision.
Nat.Chem.Biol., 15, 2019
6A7H
DownloadVisualize
BU of 6a7h by Molmil
Bacterial protein toxins
Descriptor: RTX toxin, SULFATE ION
Authors:Kim, M.H, Hwang, J, Jang, S.Y.
Deposit date:2018-07-03
Release date:2018-10-10
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Structural basis of inactivation of Ras and Rap1 small GTPases by Ras/Rap1-specific endopeptidase from the sepsis-causing pathogenVibrio vulnificus
J. Biol. Chem., 293, 2018
6AJO
DownloadVisualize
BU of 6ajo by Molmil
Complex form of Uracil DNA glycosylase X and uracil-DNA.
Descriptor: DNA (5'-D(P*(ORP)P*TP*T)-3'), IRON/SULFUR CLUSTER, PHOSPHATE ION, ...
Authors:Ahn, W.C, Aroli, S, Varshney, U, Woo, E.J.
Deposit date:2018-08-28
Release date:2019-05-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.269 Å)
Cite:Covalent binding of uracil DNA glycosylase UdgX to abasic DNA upon uracil excision.
Nat.Chem.Biol., 15, 2019
6AJR
DownloadVisualize
BU of 6ajr by Molmil
Complex form of Uracil DNA glycosylase X and uracil
Descriptor: IRON/SULFUR CLUSTER, URACIL, Uracil DNA glycosylase superfamily protein
Authors:Ahn, W.C, Aroli, S, Varshney, U, Woo, E.J.
Deposit date:2018-08-28
Release date:2019-05-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.341 Å)
Cite:Covalent binding of uracil DNA glycosylase UdgX to abasic DNA upon uracil excision.
Nat.Chem.Biol., 15, 2019
6A8J
DownloadVisualize
BU of 6a8j by Molmil
Crystal structure of bacterial protein toxins
Descriptor: GLYCEROL, RTX toxin, SULFATE ION
Authors:Kim, M.H, Hwang, J, Jang, S.Y.
Deposit date:2018-07-09
Release date:2018-10-10
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.711 Å)
Cite:Structural basis of inactivation of Ras and Rap1 small GTPases by Ras/Rap1-specific endopeptidase from the sepsis-causing pathogenVibrio vulnificus
J. Biol. Chem., 293, 2018

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon