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4WHA
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Lipoxygenase-1 (soybean) L546A/L754A mutant
分子名称: 1,2-ETHANEDIOL, ACETATE ION, FE (III) ION, ...
著者Scouras, A.D, Carr, C.A.M, Hu, S, Klinman, J.P.
登録日2014-09-21
公開日2014-11-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Extremely elevated room-temperature kinetic isotope effects quantify the critical role of barrier width in enzymatic C-H activation.
J.Am.Chem.Soc., 136, 2014
1AXG
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BU of 1axg by Molmil
CRYSTAL STRUCTURE OF THE VAL203->ALA MUTANT OF LIVER ALCOHOL DEHYDROGENASE COMPLEXED WITH COFACTOR NAD AND INHIBITOR TRIFLUOROETHANOL SOLVED TO 2.5 ANGSTROM RESOLUTION
分子名称: ALCOHOL DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, TRIFLUOROETHANOL, ...
著者Colby, T.D, Chin, J.K, Bahnson, B.J, Goldstein, B.M, Klinman, J.P.
登録日1997-10-15
公開日1998-04-15
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A link between protein structure and enzyme catalyzed hydrogen tunneling.
Proc.Natl.Acad.Sci.USA, 94, 1997
1A71
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TERNARY COMPLEX OF AN ACTIVE SITE DOUBLE MUTANT OF HORSE LIVER ALCOHOL DEHYDROGENASE, PHE93=>TRP, VAL203=>ALA WITH NAD AND TRIFLUOROETHANOL
分子名称: LIVER ALCOHOL DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, TRIFLUOROETHANOL, ...
著者Colby, T.D, Bahnson, B.J, Chin, J.K, Klinman, J.P, Goldstein, B.M.
登録日1998-03-19
公開日1998-06-17
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Active site modifications in a double mutant of liver alcohol dehydrogenase: structural studies of two enzyme-ligand complexes.
Biochemistry, 37, 1998
1A72
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AN ACTIVE-SITE DOUBLE MUTANT (PHE93->TRP, VAL203->ALA) OF HORSE LIVER ALCOHOL DEHYDROGENASE IN COMPLEX WITH THE ISOSTERIC NAD ANALOG CPAD
分子名称: 5-BETA-D-RIBOFURANOSYLPICOLINAMIDE ADENINE-DINUCLEOTIDE, HORSE LIVER ALCOHOL DEHYDROGENASE, ZINC ION
著者Colby, T.D, Bahnson, B.J, Chin, J.K, Klinman, J.P, Goldstein, B.M.
登録日1998-03-19
公開日1998-06-17
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Active site modifications in a double mutant of liver alcohol dehydrogenase: structural studies of two enzyme-ligand complexes.
Biochemistry, 37, 1998
4WFO
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manganese-substituted soybean lipoxygenase-1
分子名称: 1,2-ETHANEDIOL, ACETATE ION, MANGANESE (II) ION, ...
著者Carr, C.A.M, Scouras, A.D, Klinman, J.P.
登録日2014-09-16
公開日2015-09-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Direct detection of active-site geometries in soybean lipoxygenase-1 by ENDOR
To Be Published
1ZDR
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BU of 1zdr by Molmil
DHFR from Bacillus Stearothermophilus
分子名称: GLYCEROL, SULFATE ION, dihydrofolate reductase
著者Kim, H.S, Damo, S.M, Lee, S.Y, Wemmer, D, Klinman, J.P.
登録日2005-04-14
公開日2005-08-30
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and hydride transfer mechanism of a moderate thermophilic dihydrofolate reductase from Bacillus stearothermophilus and comparison to its mesophilic and hyperthermophilic homologues.
Biochemistry, 44, 2005
3NBJ
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BU of 3nbj by Molmil
Crystal Structure of Y305F mutant of the copper amine oxidase from Hansenula polymorpha expressed in yeast
分子名称: COPPER (II) ION, PHOSPHATE ION, Peroxisomal primary amine oxidase
著者Chen, Z, Datta, S, DuBois, J.L, Klinman, J.P, Mathews, F.S.
登録日2010-06-03
公開日2010-08-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Mutation at a strictly conserved, active site tyrosine in the copper amine oxidase leads to uncontrolled oxygenase activity.
Biochemistry, 49, 2010
3N9H
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Crystal Structural of mutant Y305A in the copper amine oxidase from hansenula polymorpha
分子名称: COPPER (II) ION, Peroxisomal primary amine oxidase
著者Chen, Z, Datta, S, DuBois, J.L, Klinman, J.P, Mathews, F.S.
登録日2010-05-30
公開日2010-08-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mutation at a strictly conserved, active site tyrosine in the copper amine oxidase leads to uncontrolled oxygenase activity.
Biochemistry, 49, 2010
3NBB
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BU of 3nbb by Molmil
Crystal structure of mutant Y305F expressed in E. coli in the copper amine oxidase from hansenula polymorpha
分子名称: COPPER (II) ION, Peroxisomal primary amine oxidase
著者Chen, Z, Datta, S, DuBois, J.L, Klinman, J.P, Mathews, F.S.
登録日2010-06-03
公開日2010-08-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Mutation at a strictly conserved, active site tyrosine in the copper amine oxidase leads to uncontrolled oxygenase activity.
Biochemistry, 49, 2010
1EKM
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BU of 1ekm by Molmil
CRYSTAL STRUCTURE AT 2.5 A RESOLUTION OF ZINC-SUBSTITUTED COPPER AMINE OXIDASE OF HANSENULA POLYMORPHA EXPRESSED IN ESCHERICHIA COLI
分子名称: COPPER AMINE OXIDASE, ZINC ION
著者Chen, Z, Schwartz, B, Williams, N.K, Li, R, Klinman, J.P, Mathews, F.S.
登録日2000-03-09
公開日2000-08-23
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure at 2.5 A resolution of zinc-substituted copper amine oxidase of Hansenula polymorpha expressed in Escherichia coli.
Biochemistry, 39, 2000
1OTV
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PqqC, Pyrroloquinolinquinone Synthase C
分子名称: Coenzyme PQQ synthesis protein C
著者Magnusson, O.T, Toyama, H, Saeki, M, Rojas, A, Reed, J.C, Adachi, O, Klinman, J.P, SChwarzenbacher, R.
登録日2003-03-23
公開日2004-05-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Quinone Biogenesis: Structure and Mechanism of PqqC, the Final Catalyst in the Production of Pyrroloquinoline Quinone.
Proc.Natl.Acad.Sci.USA, 101, 2004
1OTW
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Crystal structure of PqqC in complex with PQQ and a putative H2O2
分子名称: Coenzyme PQQ synthesis protein C, HYDROGEN PEROXIDE, PYRROLOQUINOLINE QUINONE
著者Magnusson, O.T, Toyama, H, Saeki, M, Rojas, A, Reed, J.C, Liddington, R.C, Klinman, J.P, Schwarzenbacher, R.
登録日2003-03-23
公開日2004-05-11
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Quinone biogenesis: Structure and mechanism of PqqC, the final catalyst in the production of pyrroloquinoline quinone.
Proc.Natl.Acad.Sci.USA, 101, 2004
1AXE
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BU of 1axe by Molmil
CRYSTAL STRUCTURE OF THE ACTIVE-SITE MUTANT PHE93->TRP OF HORSE LIVER ALCOHOL DEHYDROGENASE IN COMPLEX WITH NAD AND INHIBITOR TRIFLUOROETHANOL
分子名称: ALCOHOL DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, TRIFLUOROETHANOL, ...
著者Colby, T.D, Chin, J.K, Goldstein, B.M.
登録日1997-10-15
公開日1998-04-15
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A link between protein structure and enzyme catalyzed hydrogen tunneling.
Proc.Natl.Acad.Sci.USA, 94, 1997
7SOJ
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BU of 7soj by Molmil
Structure of V750A Soybean Lipoxygenase at 277K
分子名称: FE (III) ION, Lipoxygenase
著者Gee, C.L, Offenbacher, A.R, Hu, S.
登録日2021-10-31
公開日2022-11-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Temporal and spatial resolution of distal protein motions that activate hydrogen tunneling in soybean lipoxygenase.
Proc.Natl.Acad.Sci.USA, 120, 2023
7SOI
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Structure of I552A Soybean Lipoxygenase at 277K
分子名称: FE (III) ION, Lipoxygenase, SODIUM ION
著者Gee, C.L, Offenbacher, A.R, Hu, S.
登録日2021-10-31
公開日2022-11-09
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Temporal and spatial resolution of distal protein motions that activate hydrogen tunneling in soybean lipoxygenase.
Proc.Natl.Acad.Sci.USA, 120, 2023
3BND
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BU of 3bnd by Molmil
Lipoxygenase-1 (Soybean), I553V Mutant
分子名称: FE (III) ION, Seed lipoxygenase-1
著者Tomchick, D.R.
登録日2007-12-14
公開日2008-04-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Enzyme structure and dynamics affect hydrogen tunneling: the impact of a remote side chain (I553) in soybean lipoxygenase-1.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3BNE
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BU of 3bne by Molmil
Lipoxygenase-1 (Soybean) I553A Mutant
分子名称: FE (III) ION, Seed lipoxygenase-1
著者Tomchick, D.R.
登録日2007-12-14
公開日2008-04-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Enzyme structure and dynamics affect hydrogen tunneling: the impact of a remote side chain (I553) in soybean lipoxygenase-1.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3BNB
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Lipoxygenase-1 (Soybean) I553L Mutant
分子名称: FE (III) ION, Seed lipoxygenase-1
著者Tomchick, D.R.
登録日2007-12-14
公開日2008-04-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Enzyme structure and dynamics affect hydrogen tunneling: the impact of a remote side chain (I553) in soybean lipoxygenase-1.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3BNC
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Lipoxygenase-1 (Soybean) I553G Mutant
分子名称: ACETIC ACID, FE (III) ION, Seed lipoxygenase-1
著者Tomchick, D.R.
登録日2007-12-14
公開日2008-04-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Enzyme structure and dynamics affect hydrogen tunneling: the impact of a remote side chain (I553) in soybean lipoxygenase-1.
Proc.Natl.Acad.Sci.Usa, 105, 2008
6C8V
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BU of 6c8v by Molmil
X-ray structure of PqqE from Methylobacterium extorquens
分子名称: Coenzyme PQQ synthesis protein E, FE2/S2 (INORGANIC) CLUSTER, IRON/SULFUR CLUSTER
著者Gizzi, A.S, Grove, T.L, Bonanno, J.B, Almo, S.C.
登録日2018-01-25
公開日2018-02-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献X-ray and EPR Characterization of the Auxiliary Fe-S Clusters in the Radical SAM Enzyme PqqE.
Biochemistry, 57, 2018
6OWM
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Horse liver F93W alcohol dehydrogenase complexed with NAD and pentafluorobenzyl alcohol
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, 2,3,4,5,6-PENTAFLUOROBENZYL ALCOHOL, Alcohol dehydrogenase E chain, ...
著者Plapp, B.V.
登録日2019-05-10
公開日2019-05-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Substitutions of Amino Acid Residues in the Substrate Binding Site of Horse Liver Alcohol Dehydrogenase Have Small Effects on the Structures but Significantly Affect Catalysis of Hydrogen Transfer.
Biochemistry, 59, 2020
6OWP
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BU of 6owp by Molmil
Horse liver F93W alcohol dehydrogenase complexed with NAD and trifluoroethanol
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, Alcohol dehydrogenase E chain, NICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM), ...
著者Plapp, B.V.
登録日2019-05-10
公開日2019-05-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Substitutions of Amino Acid Residues in the Substrate Binding Site of Horse Liver Alcohol Dehydrogenase Have Small Effects on the Structures but Significantly Affect Catalysis of Hydrogen Transfer.
Biochemistry, 59, 2020
6E13
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Pseudomonas putida PqqB with a non-physiological zinc at the active site binds the substrate mimic, 5-cysteinyl-3,4-dihydroxyphenylalanine (5-Cys-DOPA), non-specifically but supports the proposed function of the enzyme in pyrroloquinoline quinone biosynthesis.
分子名称: 3-{[(2S)-2-amino-2-carboxyethyl]sulfanyl}-5-hydroxy-L-tyrosine, CHLORIDE ION, Coenzyme PQQ synthesis protein B, ...
著者Evans III, R.L, Wilmot, C.M.
登録日2018-07-09
公開日2019-05-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.349 Å)
主引用文献Discovery of Hydroxylase Activity for PqqB Provides a Missing Link in the Pyrroloquinoline Quinone Biosynthetic Pathway.
J.Am.Chem.Soc., 141, 2019
4KFE
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BU of 4kfe by Molmil
Crystal structure of Hansenula polymorpha copper amine oxidase-1 reduced by methylamine at pH 7.0
分子名称: COPPER (II) ION, FORMYL GROUP, GLYCEROL, ...
著者Johnson, B.J, Yukl, E.T, Klema, V.J, Wilmot, C.M.
登録日2013-04-26
公開日2013-08-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural evidence for the semiquinone in a copper amine oxidase from Hansenula polymorpha: implications for the catalytic mechanism
J.Biol.Chem., 2013
1A2V
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COPPER AMINE OXIDASE FROM HANSENULA POLYMORPHA
分子名称: COPPER (II) ION, METHYLAMINE OXIDASE
著者Li, R, Mathews, F.S.
登録日1998-01-12
公開日1998-05-27
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystallographic study of yeast copper amine oxidase.
Acta Crystallogr.,Sect.D, 53, 1997

 

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