Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5ZRD
DownloadVisualize
BU of 5zrd by Molmil
Tyrosinase from Burkholderia thailandensis (BtTYR) at low pH condition
分子名称: CITRIC ACID, COPPER (II) ION, GLYCEROL, ...
著者Lee, S, Son, H.-F, Kim, K.-J.
登録日2018-04-24
公開日2018-10-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Basis for Highly Efficient Production of Catechol Derivatives at Acidic pH by Tyrosinase from Burkholderia thailandensis
Acs Catalysis, 8, 2018
5ZRE
DownloadVisualize
BU of 5zre by Molmil
Tyrosinase from Burkholderia thailandensis (BtTYR) at high pH condition
分子名称: COPPER (II) ION, GLYCEROL, OXYGEN ATOM, ...
著者Lee, S, Son, H.-F, Kim, K.-J.
登録日2018-04-24
公開日2018-10-31
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Basis for Highly Efficient Production of Catechol Derivatives at Acidic pH by Tyrosinase from Burkholderia thailandensis
Acs Catalysis, 8, 2018
6A6A
DownloadVisualize
BU of 6a6a by Molmil
VanYB in complex with D-Alanine
分子名称: ACETATE ION, D-ALANINE, D-alanyl-D-alanine carboxypeptidase, ...
著者Kim, H.S, Hahn, H.
登録日2018-06-27
公開日2018-09-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Structural basis for the substrate recognition of peptidoglycan pentapeptides by Enterococcus faecalis VanYB.
Int. J. Biol. Macromol., 119, 2018
8JZM
DownloadVisualize
BU of 8jzm by Molmil
The inhibitor of Toll-like receptor signaling o-vanillin binds covalently to MAL/TIRAP Lys-210
分子名称: Toll/interleukin-1 receptor domain-containing adapter protein
著者Rahaman, M.H, Jia, X, Maxwell, M.J, Mobli, M, Kobe, B.
登録日2023-07-05
公開日2024-05-01
実験手法SOLUTION NMR
主引用文献o-Vanillin binds covalently to MAL/TIRAP Lys-210 but independently inhibits TLR2.
J Enzyme Inhib Med Chem, 39, 2024
8J26
DownloadVisualize
BU of 8j26 by Molmil
CryoEM structure of SARS CoV-2 RBD and Aptamer complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, AM032-4, AM047-6, ...
著者Rahman, M.S, Jang, S.K, Lee, J.O.
登録日2023-04-14
公開日2023-06-21
最終更新日2023-07-12
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure-Guided Development of Bivalent Aptamers Blocking SARS-CoV-2 Infection.
Molecules, 28, 2023
8J1Q
DownloadVisualize
BU of 8j1q by Molmil
CryoEM structure of SARS CoV-2 RBD and Aptamer complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, AM032-0, AM047-0, ...
著者Rahman, M.S, Jang, S.K, Lee, J.O.
登録日2023-04-13
公開日2023-06-21
最終更新日2023-07-12
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structure-Guided Development of Bivalent Aptamers Blocking SARS-CoV-2 Infection.
Molecules, 28, 2023
5ZXB
DownloadVisualize
BU of 5zxb by Molmil
Crystal structure of ACK1 with compound 10d
分子名称: Activated CDC42 kinase 1, N-{3-[7-{[6-(4-acetylpiperazin-1-yl)pyridin-3-yl]amino}-1-methyl-2-oxo-1,4-dihydropyrimido[4,5-d]pyrimidin-3(2H)-yl]-4-methylphenyl}-3-(trifluoromethyl)benzamide
著者Hong, E.M, Kim, H.L, Sim, T.B.
登録日2018-05-18
公開日2018-09-26
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.198 Å)
主引用文献First SAR Study for Overriding NRAS Mutant Driven Acute Myeloid Leukemia.
J. Med. Chem., 61, 2018
5C16
DownloadVisualize
BU of 5c16 by Molmil
Myotubularin-related proetin 1
分子名称: Myotubularin-related protein 1, PHOSPHATE ION
著者Lee, B.I, Bong, S.M.
登録日2015-06-13
公開日2016-04-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Crystal Structure of Human Myotubularin-Related Protein 1 Provides Insight into the Structural Basis of Substrate Specificity
Plos One, 11, 2016
1Y4U
DownloadVisualize
BU of 1y4u by Molmil
Conformation rearrangement of heat shock protein 90 upon ADP binding
分子名称: Chaperone protein htpG
著者Huai, Q, Wang, H, Liu, Y, Kim, H, Toft, D, Ke, H.
登録日2004-12-01
公開日2005-04-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structures of the N-terminal and middle domains of E. coli Hsp90 and conformation changes upon ADP binding.
Structure, 13, 2005
1Y4S
DownloadVisualize
BU of 1y4s by Molmil
Conformation rearrangement of heat shock protein 90 upon ADP binding
分子名称: ADENOSINE-5'-DIPHOSPHATE, Chaperone protein htpG, MAGNESIUM ION
著者Huai, Q, Wang, H, Liu, Y, Kim, H, Toft, D, Ke, H.
登録日2004-12-01
公開日2005-04-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structures of the N-terminal and middle domains of E. coli Hsp90 and conformation changes upon ADP binding.
Structure, 13, 2005
5Z5A
DownloadVisualize
BU of 5z5a by Molmil
Crystal structure of Tk-PTP in the active form
分子名称: Protein-tyrosine phosphatase, VANADATE ION
著者Ku, B, Yun, H.Y, Kim, S.J.
登録日2018-01-17
公開日2018-07-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural study reveals the temperature-dependent conformational flexibility of Tk-PTP, a protein tyrosine phosphatase from Thermococcus kodakaraensis KOD1
PLoS ONE, 13, 2018
2G97
DownloadVisualize
BU of 2g97 by Molmil
Crystal Structure of Visfatin/Pre-B Cell Colony Enhancing Factor 1/Nicotinamide Phosphoribosyltransferase In Complex with the Specific Inhibitor FK-866
分子名称: (2E)-N-{4-[1-(benzenecarbonyl)piperidin-4-yl]butyl}-3-(pyridin-3-yl)prop-2-enamide, Nicotinamide phosphoribosyltransferase
著者Kim, M.-K, Eom, S.H.
登録日2006-03-05
公開日2006-08-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal Structure of Visfatin/Pre-B Cell Colony-enhancing Factor 1/Nicotinamide Phosphoribosyltransferase, Free and in Complex with the Anti-cancer Agent FK-866
J.Mol.Biol., 362, 2006
7YC5
DownloadVisualize
BU of 7yc5 by Molmil
Cryo-EM structure of SARS-CoV-2 spike in complex with K202.B bispecific antibody
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain from K202.B, bispecific antibody, ...
著者Yoo, Y, Cho, H.S.
登録日2022-06-30
公開日2023-07-05
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Novel bispecific human antibody platform specifically targeting a fully open spike conformation potently neutralizes multiple SARS-CoV-2 variants.
Antiviral Res., 212, 2023
2N3P
DownloadVisualize
BU of 2n3p by Molmil
SOLUTION NMR STRUCTURE of ASTEROPSIN G from MARINE SPONGE ASTEROPUS
分子名称: Asteropsin_G
著者Su, M, Jung, J.H.
登録日2015-06-09
公開日2016-06-08
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Stable and non-cytotoxic cystine knot peptides from a marine sponge asteropus
To be Published
2N2G
DownloadVisualize
BU of 2n2g by Molmil
SOLUTION NMR STRUCTURE of ASTEROPSIN F FROM MARINE SPONGE ASTEROPUS
分子名称: Asteropsin_F
著者Su, M, Jung, J.H.
登録日2015-05-07
公開日2016-06-08
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Stable and non-cytotoxic cystine knot peptides from a marine sponge
To be Published
5XTG
DownloadVisualize
BU of 5xtg by Molmil
Crystal structure of the cis-dihydrodiol naphthalene dehydrogenase NahB from Pseudomonas sp. MC1 in the presence of NAD+ and 2,3-dihydroxybiphenyl
分子名称: 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase, BIPHENYL-2,3-DIOL, CITRIC ACID, ...
著者Park, A.K, Kim, H.-W.
登録日2017-06-19
公開日2017-08-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.318 Å)
主引用文献Crystal structure of cis-dihydrodiol naphthalene dehydrogenase (NahB) from Pseudomonas sp. MC1: Insights into the early binding process of the substrate
Biochem. Biophys. Res. Commun., 491, 2017
5XTF
DownloadVisualize
BU of 5xtf by Molmil
Crystal structure of the cis-dihydrodiol naphthalene dehydrogenase NahB from Pseudomonas sp. MC1
分子名称: 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase
著者Park, A.K, Kim, H.-W.
登録日2017-06-19
公開日2017-08-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.095 Å)
主引用文献Crystal structure of cis-dihydrodiol naphthalene dehydrogenase (NahB) from Pseudomonas sp. MC1: Insights into the early binding process of the substrate
Biochem. Biophys. Res. Commun., 491, 2017
2G96
DownloadVisualize
BU of 2g96 by Molmil
Crystal Structure of Visfatin/Pre-B Cell Colony Enhancing Factor 1/Nicotinamide Phosphoribosyltransferase In Complex with Niconamide Mononucleotide
分子名称: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, Nicotinamide phosphoribosyltransferase
著者Eom, S.H, Kim, M.-K.
登録日2006-03-05
公開日2006-08-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal Structure of Visfatin/Pre-B Cell Colony-enhancing Factor 1/Nicotinamide Phosphoribosyltransferase, Free and in Complex with the Anti-cancer Agent FK-866
J.Mol.Biol., 362, 2006
2G95
DownloadVisualize
BU of 2g95 by Molmil
Crystal Structure of Visfatin/Pre-B Cell Colony Enhancing Factor 1/Nicotinamide Phosphoribosyltransferase
分子名称: Nicotinamide phosphoribosyltransferase
著者Kim, M.-K, Eom, S.H.
登録日2006-03-05
公開日2006-08-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of Visfatin/Pre-B Cell Colony-enhancing Factor 1/Nicotinamide Phosphoribosyltransferase, Free and in Complex with the Anti-cancer Agent FK-866
J.Mol.Biol., 362, 2006
7XW3
DownloadVisualize
BU of 7xw3 by Molmil
Cryo-EM structure of an apo-form of human DICER
分子名称: Endoribonuclease Dicer
著者Lee, H, Roh, S.-H.
登録日2022-05-26
公開日2023-03-08
最終更新日2023-03-22
実験手法ELECTRON MICROSCOPY (4.04 Å)
主引用文献Structure of the human DICER-pre-miRNA complex in a dicing state.
Nature, 615, 2023
7XW2
DownloadVisualize
BU of 7xw2 by Molmil
Cryo-EM structure of human DICER-pre-miRNA in a dicing state
分子名称: CALCIUM ION, Endoribonuclease Dicer, RNA (73-MER)
著者Lee, H, Roh, S.-H.
登録日2022-05-26
公開日2023-03-08
最終更新日2023-03-22
実験手法ELECTRON MICROSCOPY (3.04 Å)
主引用文献Structure of the human DICER-pre-miRNA complex in a dicing state.
Nature, 615, 2023
7VFL
DownloadVisualize
BU of 7vfl by Molmil
Crystal structure of SdgB (UDP, NAG, and O-glycosylated SD peptide-binding form)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glycosyl transferase, group 1 family protein, ...
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-09-13
公開日2021-11-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7VFO
DownloadVisualize
BU of 7vfo by Molmil
Crystal structure of SdgB (Phosphate-binding form)
分子名称: Glycosyl transferase, group 1 family protein, PHOSPHATE ION
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-09-13
公開日2021-11-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7VFN
DownloadVisualize
BU of 7vfn by Molmil
Crystal structure of SdgB (SD peptide-binding form)
分子名称: ASP-SER-ASP, Glycosyl transferase, group 1 family protein
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-09-13
公開日2021-11-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7VFM
DownloadVisualize
BU of 7vfm by Molmil
Crystal structure of SdgB (UDP and SD peptide-binding form)
分子名称: Glycosyl transferase, group 1 family protein, SER-ASP-SER-ASP, ...
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-09-13
公開日2021-11-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021

219515

件を2024-05-08に公開中

PDB statisticsPDBj update infoContact PDBjnumon