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3JRR
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Crystal structure of the ligand binding suppressor domain of type 3 inositol 1,4,5-trisphosphate receptor
分子名称: Inositol 1,4,5-trisphosphate receptor type 3
著者Chan, J, Ishiyama, N, Ikura, M.
登録日2009-09-08
公開日2010-09-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A 1.9 angstrom crystal structure of the suppressor domain of type 3 inositol 1,4,5-trisphosphate receptor
To be Published
3L6Y
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BU of 3l6y by Molmil
Crystal structure of p120 catenin in complex with E-cadherin
分子名称: Catenin delta-1, E-cadherin
著者Ishiyama, N, Lee, S.-H, Liu, S, Li, G.-Y, Smith, M.J, Reichardt, L.F, Ikura, M.
登録日2009-12-27
公開日2010-04-21
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Dynamic and static interactions between p120 catenin and E-cadherin regulate the stability of cell-cell adhesion.
Cell(Cambridge,Mass.), 141, 2010
3L6X
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Crystal structure of p120 catenin in complex with E-cadherin
分子名称: Catenin delta-1, E-cadherin, SULFATE ION
著者Ishiyama, N, Lee, S.-H, Liu, S, Li, G.-Y, Smith, M.J, Reichardt, L.F, Ikura, M.
登録日2009-12-27
公開日2010-04-21
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Dynamic and static interactions between p120 catenin and E-cadherin regulate the stability of cell-cell adhesion.
Cell(Cambridge,Mass.), 141, 2010
1SUH
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BU of 1suh by Molmil
AMINO-TERMINAL DOMAIN OF EPITHELIAL CADHERIN IN THE CALCIUM BOUND STATE, NMR, 20 STRUCTURES
分子名称: EPITHELIAL CADHERIN
著者Overduin, M, Tong, K.I, Kay, C.M, Ikura, M.
登録日1996-01-30
公開日1996-07-11
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献1H, 15N and 13C resonance assignments and monomeric structure of the amino-terminal extracellular domain of epithelial cadherin.
J.Biomol.NMR, 7, 1996
1PRR
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BU of 1prr by Molmil
NMR-DERIVED THREE-DIMENSIONAL SOLUTION STRUCTURE OF PROTEIN S COMPLEXED WITH CALCIUM
分子名称: CALCIUM ION, DEVELOPMENT-SPECIFIC PROTEIN S
著者Bagby, S, Harvey, T.S, Eagle, S.G, Inouye, S, Ikura, M.
登録日1994-03-25
公開日1994-08-31
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献NMR-derived three-dimensional solution structure of protein S complexed with calcium.
Structure, 2, 1994
1PRS
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BU of 1prs by Molmil
NMR-DERIVED THREE-DIMENSIONAL SOLUTION STRUCTURE OF PROTEIN S COMPLEXED WITH CALCIUM
分子名称: CALCIUM ION, DEVELOPMENT-SPECIFIC PROTEIN S
著者Bagby, S, Harvey, T.S, Eagle, S.G, Inouye, S, Ikura, M.
登録日1994-03-25
公開日1994-08-31
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献NMR-derived three-dimensional solution structure of protein S complexed with calcium.
Structure, 2, 1994
4O25
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BU of 4o25 by Molmil
Structure of Wild Type Mus musculus Rheb bound to GTP
分子名称: GTP-binding protein Rheb, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION
著者Mazhab-Jafari, M.T, Marshall, C.B, Ho, J, Ishiyama, N, Stambolic, V, Ikura, M.
登録日2013-12-16
公開日2014-03-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure-guided mutation of the conserved G3-box glycine in Rheb generates a constitutively activated regulator of mammalian target of rapamycin (mTOR).
J.Biol.Chem., 289, 2014
4O2L
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BU of 4o2l by Molmil
Structure of Mus musculus Rheb G63A mutant bound to GTP
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, GTP-binding protein Rheb, ...
著者Mazhab-Jafari, M.T, Marshall, C.B, Ho, J, Ishiyama, N, Stambolic, V, Ikura, M.
登録日2013-12-17
公開日2014-03-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure-guided mutation of the conserved G3-box glycine in Rheb generates a constitutively activated regulator of mammalian target of rapamycin (mTOR).
J.Biol.Chem., 289, 2014
4O2R
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Structure of Mus musculus Rheb G63V mutant bound to GDP
分子名称: GTP-binding protein Rheb, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
著者Mazhab-Jafari, M.T, Marshall, C.B, Ho, J, Ishiyama, N, Stambolic, V, Ikura, M.
登録日2013-12-17
公開日2014-03-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure-guided mutation of the conserved G3-box glycine in Rheb generates a constitutively activated regulator of mammalian target of rapamycin (mTOR).
J.Biol.Chem., 289, 2014
6AMB
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BU of 6amb by Molmil
Crystal Structure of the Afadin RA1 domain in complex with HRAS
分子名称: Afadin, GTPase HRas, MAGNESIUM ION, ...
著者Smith, M.J, Ishiyama, N, Ikura, M.
登録日2017-08-09
公開日2017-11-01
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Evolution of AF6-RAS association and its implications in mixed-lineage leukemia.
Nat Commun, 8, 2017
2GW3
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BU of 2gw3 by Molmil
Crystal structure of stony coral fluorescent protein Kaede, green form
分子名称: Kaede, NICKEL (II) ION
著者Hayashi, I, Mizuno, H, Miyawaki, A, Ikura, M.
登録日2006-05-03
公開日2007-05-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystallographic evidence for water-assisted photo-induced peptide cleavage in the stony coral fluorescent protein Kaede.
J.Mol.Biol., 372, 2007
2GW4
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BU of 2gw4 by Molmil
Crystal structure of stony coral fluorescent protein Kaede, red form
分子名称: Kaede, NICKEL (II) ION
著者Hayashi, I, Mizuno, H, Miyawako, A, Ikura, M.
登録日2006-05-03
公開日2007-05-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystallographic evidence for water-assisted photo-induced peptide cleavage in the stony coral fluorescent protein Kaede.
J.Mol.Biol., 372, 2007
6CC9
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BU of 6cc9 by Molmil
NMR data-driven model of GTPase KRas-GMPPNP:Cmpd2 complex tethered to a nanodisc
分子名称: (2R,4S)-4-[(5-bromo-1H-indole-3-carbonyl)amino]-2-[(4-chlorophenyl)methyl]piperidin-1-ium, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Apolipoprotein A-I, ...
著者Fang, Z, Marshall, C.B, Nishikawa, T, Gossert, A.D, Jansen, J.M, Jahnke, W, Ikura, M.
登録日2018-02-06
公開日2018-09-05
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Inhibition of K-RAS4B by a Unique Mechanism of Action: Stabilizing Membrane-Dependent Occlusion of the Effector-Binding Site.
Cell Chem Biol, 25, 2018
1JOY
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BU of 1joy by Molmil
SOLUTION STRUCTURE OF THE HOMODIMERIC DOMAIN OF ENVZ FROM ESCHERICHIA COLI BY MULTI-DIMENSIONAL NMR.
分子名称: PROTEIN (ENVZ_ECOLI)
著者Tomomori, C, Tanaka, T, Dutta, R, Park, H, Saha, S.K, Zhu, Y, Ishima, R, Liu, D, Tong, K.I, Kurokawa, H, Qian, H, Inouye, M, Ikura, M.
登録日1998-12-28
公開日2000-01-12
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of the homodimeric core domain of Escherichia coli histidine kinase EnvZ.
Nat.Struct.Biol., 6, 1999
6CCX
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BU of 6ccx by Molmil
NMR data-driven model of GTPase KRas-GMPPNP:Cmpd2 complex tethered to a nanodisc
分子名称: (2R,4S)-4-[(5-bromo-1H-indole-3-carbonyl)amino]-2-[(4-chlorophenyl)methyl]piperidin-1-ium, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Apolipoprotein A-I, ...
著者Fang, Z, Marshall, C.B, Nishikawa, T, Gossert, A.D, Jansen, J.M, Jahnke, W, Ikura, M.
登録日2018-02-07
公開日2018-09-05
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Inhibition of K-RAS4B by a Unique Mechanism of Action: Stabilizing Membrane-Dependent Occlusion of the Effector-Binding Site.
Cell Chem Biol, 25, 2018
6CCH
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BU of 6cch by Molmil
NMR data-driven model of GTPase KRas-GMPPNP tethered to a nanodisc (E3 state)
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Apolipoprotein A-I, GTPase KRas, ...
著者Fang, Z, Marshall, C.B, Nishikawa, T, Gossert, A.D, Jansen, J.M, Jahnke, W, Ikura, M.
登録日2018-02-07
公開日2018-08-29
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Inhibition of K-RAS4B by a Unique Mechanism of Action: Stabilizing Membrane-Dependent Occlusion of the Effector-Binding Site.
Cell Chem Biol, 25, 2018
6DUW
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BU of 6duw by Molmil
Crystal structure of the alpha-N-catenin actin-binding domain H1 mutant
分子名称: Catenin alpha-2
著者Ishiyama, N, Ikura, M.
登録日2018-06-22
公開日2018-12-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Force-dependent allostery of the alpha-catenin actin-binding domain controls adherens junction dynamics and functions.
Nat Commun, 9, 2018
6DV1
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BU of 6dv1 by Molmil
Crystal structure of the alpha-E-catenin actin-binding domain
分子名称: BROMIDE ION, Catenin alpha-1, SULFATE ION
著者Ishiyama, N, Ikura, M.
登録日2018-06-22
公開日2018-12-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Force-dependent allostery of the alpha-catenin actin-binding domain controls adherens junction dynamics and functions.
Nat Commun, 9, 2018
6DUY
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BU of 6duy by Molmil
Crystal structure of the alpha-N-catenin actin-binding domain H1 mutant
分子名称: Catenin alpha-2
著者Ishiyama, N, Ikura, M.
登録日2018-06-22
公開日2018-12-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Force-dependent allostery of the alpha-catenin actin-binding domain controls adherens junction dynamics and functions.
Nat Commun, 9, 2018
1N4K
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BU of 1n4k by Molmil
Crystal structure of the inositol 1,4,5-trisphosphate receptor binding core in complex with IP3
分子名称: D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, Inositol 1,4,5-trisphosphate receptor type 1
著者Bosanac, I, Alattia, J.R, Mal, T.K, Chan, J, Talarico, S, Tong, F.K, Tong, K.I, Yoshikawa, F, Furuichi, T, Iwai, M, Michikawa, T, Mikoshiba, K, Ikura, M.
登録日2002-10-31
公開日2002-12-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of the inositol 1,4,5-trisphosphate receptor binding core in complex with its ligand.
Nature, 420, 2002
1MUX
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BU of 1mux by Molmil
SOLUTION NMR STRUCTURE OF CALMODULIN/W-7 COMPLEX: THE BASIS OF DIVERSITY IN MOLECULAR RECOGNITION, 30 STRUCTURES
分子名称: CALCIUM ION, CALMODULIN, N-(6-AMINOHEXYL)-5-CHLORO-1-NAPHTHALENESULFONAMIDE
著者Osawa, M, Swindells, M.B, Tanikawa, J, Tanaka, T, Mase, T, Furuya, T, Ikura, M.
登録日1997-09-06
公開日1998-10-14
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Solution structure of calmodulin-W-7 complex: the basis of diversity in molecular recognition.
J.Mol.Biol., 276, 1998
1TFB
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BU of 1tfb by Molmil
NMR STUDIES OF HUMAN GENERAL TRANSCRIPTION FACTOR TFIIB: DYNAMICS AND INTERACTION WITH VP16 ACTIVATION DOMAIN, 20 STRUCTURES
分子名称: TFIIB
著者Bagby, S, Ikura, M.
登録日1996-11-14
公開日1997-03-12
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Human general transcription factor TFIIB: conformational variability and interaction with VP16 activation domain.
Biochemistry, 37, 1998
1IKU
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myristoylated recoverin in the calcium-free state, NMR, 22 structures
分子名称: MYRISTIC ACID, RECOVERIN
著者Tanaka, T, Ames, J.B, Harvey, T.S, Stryer, L, Ikura, M.
登録日1996-01-18
公開日1996-07-11
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Sequestration of the membrane-targeting myristoyl group of recoverin in the calcium-free state.
Nature, 376, 1995
1XZZ
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BU of 1xzz by Molmil
Crystal structure of the ligand binding suppressor domain of type 1 inositol 1,4,5-trisphosphate receptor
分子名称: GLYCEROL, Inositol 1,4,5-trisphosphate receptor type 1
著者Bosanac, I, Yamazaki, H, Matsu-ura, T, Michikawa, T, Mikoshiba, K, Ikura, M.
登録日2004-11-13
公開日2005-01-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of the ligand binding suppressor domain of type 1 inositol 1,4,5-trisphosphate receptor.
Mol.Cell, 17, 2005
1RO4
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BU of 1ro4 by Molmil
RDC-derived models of the zinc ribbon domain of human general transcription factor TFIIB (zinc free structures)
分子名称: Transcription initiation factor IIB
著者Ghosh, M, Ikura, M.
登録日2003-12-01
公開日2004-05-25
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Probing Zn2+-binding effects on the zinc-ribbon domain of human general transcription factor TFIIB.
Biochem.J., 378, 2004

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