Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3MEY
DownloadVisualize
BU of 3mey by Molmil
Crystal structure of class II aaRS homologue (Bll0957) complexed with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Bll0957 protein, MAGNESIUM ION, ...
Authors:Weygand-Durasevic, I, Mocibob, M, Ivic, N, Bilokapic, S, Maier, T, Luic, M, Ban, N.
Deposit date:2010-04-01
Release date:2010-07-28
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Homologs of aminoacyl-tRNA synthetases acylate carrier proteins and provide a link between ribosomal and nonribosomal peptide synthesis
Proc.Natl.Acad.Sci.USA, 107, 2010
4PHO
DownloadVisualize
BU of 4pho by Molmil
ClyA CC6/264 ox (2-303)
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, Hemolysin E, ...
Authors:Roderer, D.J.A, Glockshuber, R, Ban, N.
Deposit date:2014-05-06
Release date:2014-09-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.123 Å)
Cite:Characterization of Variants of the Pore-Forming Toxin ClyA from Escherichia coli Controlled by a Redox Switch.
Biochemistry, 53, 2014
6S0K
DownloadVisualize
BU of 6s0k by Molmil
Ribosome nascent chain in complex with SecA
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L10, 50S ribosomal protein L11, ...
Authors:Jomaa, A, Wang, S, Shan, S, Ban, N.
Deposit date:2019-06-17
Release date:2019-10-09
Last modified:2022-03-30
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The molecular mechanism of cotranslational membrane protein recognition and targeting by SecA.
Nat.Struct.Mol.Biol., 26, 2019
6SG9
DownloadVisualize
BU of 6sg9 by Molmil
Head domain of the mt-SSU assemblosome from Trypanosoma brucei
Descriptor: 9S rRNA, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Saurer, M, Ramrath, D.J.F, Niemann, M, Calderaro, S, Prange, C, Mattei, S, Scaiola, A, Leitner, A, Bieri, P, Horn, E.K, Leibundgut, M, Boehringer, D, Schneider, A, Ban, N.
Deposit date:2019-08-03
Release date:2019-09-18
Last modified:2019-09-25
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Mitoribosomal small subunit biogenesis in trypanosomes involves an extensive assembly machinery.
Science, 365, 2019
6SGA
DownloadVisualize
BU of 6sga by Molmil
Body domain of the mt-SSU assemblosome from Trypanosoma brucei
Descriptor: 9S rRNA, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Saurer, M, Ramrath, D.J.F, Niemann, M, Calderaro, S, Prange, C, Mattei, S, Scaiola, A, Leitner, A, Bieri, P, Horn, E.K, Leibundgut, M, Boehringer, D, Schneider, A, Ban, N.
Deposit date:2019-08-03
Release date:2019-09-18
Last modified:2019-09-25
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Mitoribosomal small subunit biogenesis in trypanosomes involves an extensive assembly machinery.
Science, 365, 2019
6SGB
DownloadVisualize
BU of 6sgb by Molmil
mt-SSU assemblosome of Trypanosoma brucei
Descriptor: 9S rRNA, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Saurer, M, Ramrath, D.J.F, Niemann, M, Calderaro, S, Prange, C, Mattei, S, Scaiola, A, Leitner, A, Bieri, P, Horn, E.K, Leibundgut, M, Boehringer, D, Schneider, A, Ban, N.
Deposit date:2019-08-03
Release date:2019-09-25
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Mitoribosomal small subunit biogenesis in trypanosomes involves an extensive assembly machinery.
Science, 365, 2019
1K9M
DownloadVisualize
BU of 1k9m by Molmil
Co-crystal structure of tylosin bound to the 50S ribosomal subunit of Haloarcula marismortui
Descriptor: 23S RRNA, 5S RRNA, CADMIUM ION, ...
Authors:Hansen, J.L, Ippolito, J.A, Ban, N, Nissen, P, Moore, P.B, Steitz, T.A.
Deposit date:2001-10-29
Release date:2002-07-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structures of four macrolide antibiotics bound to the large ribosomal subunit.
Mol.Cell, 10, 2002
1KD1
DownloadVisualize
BU of 1kd1 by Molmil
Co-crystal Structure of Spiramycin bound to the 50S Ribosomal Subunit of Haloarcula marismortui
Descriptor: 23S RRNA, 5S RRNA, CADMIUM ION, ...
Authors:Hansen, J.L, Ippolito, J.A, Ban, N, Nissen, P, Moore, P.B, Steitz, T.A.
Deposit date:2001-11-12
Release date:2002-07-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structures of four macrolide antibiotics bound to the large ribosomal subunit.
Mol.Cell, 10, 2002
5AJ3
DownloadVisualize
BU of 5aj3 by Molmil
Structure of the small subunit of the mammalian mitoribosome
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, MITORIBOSOMAL 12S RRNA, ...
Authors:Greber, B.J, Bieri, P, Leibundgut, M, Leitner, A, Aebersold, R, Boehringer, D, Ban, N.
Deposit date:2015-02-20
Release date:2015-04-22
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Ribosome. The complete structure of the 55S mammalian mitochondrial ribosome.
Science, 348, 2015
5AJ4
DownloadVisualize
BU of 5aj4 by Molmil
Structure of the 55S mammalian mitoribosome.
Descriptor: 28S RIBOSOMAL PROTEIN S18B, MITOCHONDRIAL, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Greber, B.J, Bieri, P, Leibundgut, M, Leitner, A, Aebersold, R, Boehringer, D, Ban, N.
Deposit date:2015-02-20
Release date:2015-04-22
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:The complete structure of the 55S mammalian mitochondrial ribosome.
Science, 348, 2015
4ACB
DownloadVisualize
BU of 4acb by Molmil
CRYSTAL STRUCTURE OF TRANSLATION ELONGATION FACTOR SELB FROM METHANOCOCCUS MARIPALUDIS IN COMPLEX WITH THE GTP ANALOGUE GPPNHP
Descriptor: (3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-MONOPHOSPHATE, ...
Authors:Leibundgut, M, Frick, C, Thanbichler, M, Boeck, A, Ban, N.
Deposit date:2011-12-14
Release date:2012-11-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.34 Å)
Cite:Selenocysteine tRNA-Specific Elongation Factor Selb is a Structural Chimaera of Elongation and Initiation Factors.
Embo J., 24, 2005
4ADV
DownloadVisualize
BU of 4adv by Molmil
Structure of the E. coli methyltransferase KsgA bound to the E. coli 30S ribosomal subunit
Descriptor: 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
Authors:Boehringer, D, O'Farrell, H.C, Rife, J.P, Ban, N.
Deposit date:2012-01-03
Release date:2012-02-15
Last modified:2018-04-11
Method:ELECTRON MICROSCOPY (13.5 Å)
Cite:Structural Insights Into Methyltransferase Ksga Function in 30S Ribosomal Subunit Biogenesis
J.Biol.Chem., 287, 2012
4AC9
DownloadVisualize
BU of 4ac9 by Molmil
CRYSTAL STRUCTURE OF TRANSLATION ELONGATION FACTOR SELB FROM METHANOCOCCUS MARIPALUDIS IN COMPLEX WITH GDP
Descriptor: (3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-MONOPHOSPHATE, ...
Authors:Leibundgut, M, Frick, C, Thanbichler, M, Boeck, A, Ban, N.
Deposit date:2011-12-14
Release date:2012-08-22
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:Selenocysteine tRNA-Specific Elongation Factor Selb is a Structural Chimaera of Elongation and Initiation Factors.
Embo J., 24, 2005
6FAI
DownloadVisualize
BU of 6fai by Molmil
Structure of a eukaryotic cytoplasmic pre-40S ribosomal subunit
Descriptor: 20S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ...
Authors:Scaiola, A, Pena, C, Weisser, M, Boehringer, D, Leibundgut, M, Klingauf-Nerurkar, P, Gerhardy, S, Panse, V.G, Ban, N.
Deposit date:2017-12-15
Release date:2018-02-28
Last modified:2018-04-11
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure of a eukaryotic cytoplasmic pre-40S ribosomal subunit.
EMBO J., 37, 2018
7PUA
DownloadVisualize
BU of 7pua by Molmil
Middle assembly intermediate of the Trypanosoma brucei mitoribosomal small subunit
Descriptor: 30S Ribosomal protein S17, putative, 30S ribosomal protein S8, ...
Authors:Lenarcic, T, Leibundgut, M, Saurer, M, Ramrath, D.J.F, Fluegel, T, Boehringer, D, Ban, N.
Deposit date:2021-09-29
Release date:2022-03-02
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Mitoribosomal small subunit maturation involves formation of initiation-like complexes.
Proc.Natl.Acad.Sci.USA, 119, 2022
7PUB
DownloadVisualize
BU of 7pub by Molmil
Late assembly intermediate of the Trypanosoma brucei mitoribosomal small subunit
Descriptor: 30S Ribosomal protein S17, putative, 30S ribosomal protein S8, ...
Authors:Lenarcic, T, Leibundgut, M, Saurer, M, Ramrath, D.J.F, Fluegel, T, Boehringer, D, Ban, N.
Deposit date:2021-09-29
Release date:2022-05-04
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Mitoribosomal small subunit maturation involves formation of initiation-like complexes.
Proc.Natl.Acad.Sci.USA, 119, 2022
5EF5
DownloadVisualize
BU of 5ef5 by Molmil
Crystal structure of Chaetomium thermophilum Raptor
Descriptor: Raptor from Chaetomium thermophilum
Authors:Imseng, S, Sauer, E, Aylett, C.H.S, Boehringer, D, Hall, M.N, Ban, N, Maier, T.
Deposit date:2015-10-23
Release date:2015-12-30
Last modified:2019-10-02
Method:X-RAY DIFFRACTION (4.3 Å)
Cite:Architecture of human mTOR complex 1.
Science, 351, 2016
7QWS
DownloadVisualize
BU of 7qws by Molmil
Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC
Descriptor: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Jomaa, A, Gamerdinger, M, Hsieh, H, Wallisch, A, Chandrasekaran, V, Ulusoy, Z, Scaiola, A, Hegde, R, Shan, S, Ban, N, Deuerling, E.
Deposit date:2022-01-25
Release date:2022-03-09
Last modified:2022-03-23
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Mechanism of signal sequence handover from NAC to SRP on ribosomes during ER-protein targeting.
Science, 375, 2022
7QWR
DownloadVisualize
BU of 7qwr by Molmil
Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC
Descriptor: 28S rRNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
Authors:Jomaa, A, Gamerdinger, M, Hsieh, H, Wallisch, A, Chandrasekaran, V, Ulusoy, Z, Scaiola, A, Hegde, R, Shan, S, Ban, N, Deuerling, E.
Deposit date:2022-01-25
Release date:2022-03-09
Last modified:2022-03-23
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Mechanism of signal sequence handover from NAC to SRP on ribosomes during ER-protein targeting.
Science, 375, 2022
7QWQ
DownloadVisualize
BU of 7qwq by Molmil
Ternary complex of ribosome nascent chain with SRP and NAC
Descriptor: 28S rRNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
Authors:Jomaa, A, Gamerdinger, M, Hsieh, H, Wallisch, A, Chandrasekaran, V, Ulusoy, Z, Scaiola, A, Hegde, R, Shan, S, Ban, N, Deuerling, E.
Deposit date:2022-01-25
Release date:2022-03-16
Last modified:2022-03-30
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:Mechanism of signal sequence handover from NAC to SRP on ribosomes during ER-protein targeting.
Science, 375, 2022
6GB2
DownloadVisualize
BU of 6gb2 by Molmil
Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the 39S ribosomal subunit.
Descriptor: 'Mitochondrial ribosomal protein L30, 'Mitochondrial ribosomal protein L55, 'Mitochondrial ribosomal protein L59, ...
Authors:Kummer, E, Leibundgut, M, Boehringer, D, Ban, N.
Deposit date:2018-04-13
Release date:2018-08-08
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM.
Nature, 560, 2018
6FRK
DownloadVisualize
BU of 6frk by Molmil
Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex
Descriptor: 28S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
Authors:Kobayashi, K, Jomaa, A, Ban, N.
Deposit date:2018-02-16
Release date:2018-03-28
Last modified:2018-05-02
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of a prehandover mammalian ribosomal SRP·SRP receptor targeting complex.
Science, 360, 2018
5GAG
DownloadVisualize
BU of 5gag by Molmil
RNC in complex with SRP-SR in the closed state
Descriptor: 1A9L SS, 23S rRNA, 50S ribosomal protein L10, ...
Authors:Jomaa, A, Boehringer, D, Leibundgut, M, Ban, N.
Deposit date:2015-11-26
Release date:2016-01-27
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structures of the E. coli translating ribosome with SRP and its receptor and with the translocon.
Nat Commun, 7, 2016
5GAF
DownloadVisualize
BU of 5gaf by Molmil
RNC in complex with SRP
Descriptor: 1A9L SS, 23S ribosomal RNA, 50S ribosomal protein L10, ...
Authors:Jomaa, A, Boehringer, D, Leibundgut, M, Ban, N.
Deposit date:2015-11-25
Release date:2016-02-03
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structures of the E. coli translating ribosome with SRP and its receptor and with the translocon
Nat Commun, 7, 2016
5FLC
DownloadVisualize
BU of 5flc by Molmil
Architecture of human mTOR Complex 1 - 5.9 Angstrom reconstruction
Descriptor: FKBP, RAPAMYCIN IMMUNOSUPPRESSANT DRUG, REGULATORY-ASSOCIATED PROTEIN OF MTOR, ...
Authors:Aylett, C.H.S, Sauer, E, Imseng, S, Boehringer, D, Hall, M.N, Ban, N, Maier, T.
Deposit date:2015-10-23
Release date:2015-12-30
Last modified:2019-04-24
Method:ELECTRON MICROSCOPY (5.9 Å)
Cite:Architecture of Human Mtor Complex 1
Science, 351, 2016

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon