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6GQ1
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BU of 6gq1 by Molmil
Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP/sordarin)
Descriptor: 18S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ...
Authors:Pellegrino, S, Demeshkina, N, Mancera-Martinez, E, Melnikov, S, Simonetti, A, Myasnikov, A, Yusupov, M, Yusupova, G, Hashem, Y.
Deposit date:2018-06-07
Release date:2018-07-11
Last modified:2018-08-08
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Structural Insights into the Role of Diphthamide on Elongation Factor 2 in mRNA Reading-Frame Maintenance.
J. Mol. Biol., 430, 2018
7CFN
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BU of 7cfn by Molmil
Cryo-EM structure of the INT-777-bound GPBAR-Gs complex
Descriptor: (2S,4R)-4-[(3R,5S,6R,7R,8R,9S,10S,12S,13R,14S,17R)-6-ethyl-10,13-dimethyl-3,7,12-tris(oxidanyl)-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-17-yl]-2-methyl-pentanoic acid, CHOLESTEROL, G-protein coupled bile acid receptor 1, ...
Authors:Yang, F, Mao, C, Guo, L, Lin, J, Ming, Q, Xiao, P, Wu, X, Shen, Q, Guo, S, Shen, D, Lu, R, Zhang, L, Huang, S, Ping, Y, Zhang, C, Ma, C, Zhang, K, Liang, X, Shen, Y, Nan, F, Yi, F, Luca, V, Zhou, J, Jiang, C, Sun, J, Xie, X, Yu, X, Zhang, Y.
Deposit date:2020-06-27
Release date:2020-09-09
Last modified:2021-04-07
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis of GPBAR activation and bile acid recognition.
Nature, 587, 2020
7CFM
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BU of 7cfm by Molmil
Cryo-EM structure of the P395-bound GPBAR-Gs complex
Descriptor: 2-(ethylamino)-6-[3-(4-propan-2-ylphenyl)propanoyl]-7,8-dihydro-5H-pyrido[4,3-d]pyrimidine-4-carboxamide, CHOLESTEROL, G-protein coupled bile acid receptor 1, ...
Authors:Yang, F, Mao, C, Guo, L, Lin, J, Ming, Q, Xiao, P, Wu, X, Shen, Q, Guo, S, Shen, D, Lu, R, Zhang, L, Huang, S, Ping, Y, Zhang, C, Ma, C, Zhang, K, Liang, X, Shen, Y, Nan, F, Yi, F, Luca, V, Zhou, J, Jiang, C, Sun, J, Xie, X, Yu, X, Zhang, Y.
Deposit date:2020-06-27
Release date:2020-09-09
Last modified:2020-12-02
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis of GPBAR activation and bile acid recognition.
Nature, 587, 2020
4NSD
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BU of 4nsd by Molmil
Crystal Structure of CBARA1 in the Ca2+ Binding Form
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Wang, L, Yang, X, Li, S, Shen, Y.
Deposit date:2013-11-28
Release date:2014-02-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and mechanistic insights into MICU1 regulation of mitochondrial calcium uptake.
Embo J., 33, 2014
6AKI
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BU of 6aki by Molmil
Calcium release-activated calcium channel protein 1, P288L mutant
Descriptor: CHLORIDE ION, Calcium release-activated calcium channel protein 1
Authors:Liu, X, Wu, G, Yang, X, Shen, Y.
Deposit date:2018-09-01
Release date:2019-03-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (4.496 Å)
Cite:Calcium release-activated calcium channel protein 1, P288L mutant
To Be Published
6BEK
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BU of 6bek by Molmil
Structure of sIHF bound to an 8bp palindromic DNA
Descriptor: DNA (5'-D(*CP*AP*TP*GP*CP*AP*TP*G)-3'), POTASSIUM ION, SCO1480
Authors:Guarne, A, Nanji, T.N, Shen, Y.
Deposit date:2017-10-25
Release date:2018-10-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Streptomyces IHF uses multiple interfaces to bind DNA.
Biochim Biophys Acta Gen Subj, 1863, 2019
6LYG
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BU of 6lyg by Molmil
Cryo-EM structure of the calcium homeostasis modulator 1 channel
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Calcium homeostasis modulator 1
Authors:Ren, Y, Yang, X, Shen, Y.
Deposit date:2020-02-14
Release date:2020-10-07
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structure of the calcium homeostasis modulator 1 channel.
Sci Adv, 6, 2020
4NSC
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BU of 4nsc by Molmil
Crystal Structure of CBARA1 in the Apo-form
Descriptor: Calcium uptake protein 1, mitochondrial
Authors:Wang, L, Yang, X, Li, S, Shen, Y.
Deposit date:2013-11-28
Release date:2014-02-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural and mechanistic insights into MICU1 regulation of mitochondrial calcium uptake.
Embo J., 33, 2014
5Z6R
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BU of 5z6r by Molmil
SPASTIN AAA WITH ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Spastin
Authors:Lin, Z, Wang, C, Shen, Y.
Deposit date:2018-01-25
Release date:2019-01-30
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Aaa Family Protein Spastin Severs A Microtubule
To Be Published
7Y53
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BU of 7y53 by Molmil
The cryo-EM structure of human ERAD retro-translocation complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Derlin-1, Transitional endoplasmic reticulum ATPase
Authors:Cao, Y, Rao, B, Wang, Q, Yao, D, Xia, Y, Li, W, Li, S, Shen, Y.
Deposit date:2022-06-16
Release date:2023-10-18
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (3.61 Å)
Cite:The cryo-EM structure of the human ERAD retrotranslocation complex.
Sci Adv, 9, 2023
7Y59
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BU of 7y59 by Molmil
The cryo-EM structure of human ERAD retro-translocation complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Derlin-1, ...
Authors:Cao, Y, Rao, B, Wang, Q, Yao, D, Xia, Y, Li, W, Li, S, Shen, Y.
Deposit date:2022-06-16
Release date:2023-10-18
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (4.51 Å)
Cite:The cryo-EM structure of the human ERAD retrotranslocation complex.
Sci Adv, 9, 2023
7Y4W
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BU of 7y4w by Molmil
The cryo-EM structure of human ERAD retro-translocation complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Derlin-1, Transitional endoplasmic reticulum ATPase
Authors:Cao, Y, Rao, B, Wang, Q, Yao, D, Xia, Y, Li, W, Li, S, Shen, Y.
Deposit date:2022-06-16
Release date:2023-10-18
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (3.67 Å)
Cite:The cryo-EM structure of the human ERAD retrotranslocation complex.
Sci Adv, 9, 2023
5YWW
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BU of 5yww by Molmil
Archael RuvB-like Holiday junction helicase
Descriptor: GLYCEROL, Nucleotide binding protein PINc
Authors:Zhai, B, Yuan, Z, Han, X, DuPrez, K, Shen, Y, Fan, L.
Deposit date:2017-11-30
Release date:2018-06-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:The archaeal ATPase PINA interacts with the helicase Hjm via its carboxyl terminal KH domain remodeling and processing replication fork and Holliday junction.
Nucleic Acids Res., 46, 2018
3RPX
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BU of 3rpx by Molmil
Crystal structure of complement component 1, q subcomponent binding protein, C1QBP
Descriptor: Complement component 1 Q subcomponent-binding protein, UNKNOWN ATOM OR ION
Authors:Tempel, W, Tong, Y, Crombet, L, Shen, Y, Guan, X, Nedyalkova, L, Walker, J.R, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2011-04-27
Release date:2011-05-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of complement component 1, q subcomponent binding protein, C1QBP
to be published
4ZRI
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BU of 4zri by Molmil
Crystal structure of Merlin-FERM and Lats2
Descriptor: Merlin, Serine/threonine-protein kinase LATS2
Authors:Li, F, Zhou, H, Long, J, Shen, Y.
Deposit date:2015-05-12
Release date:2015-06-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Angiomotin binding-induced activation of Merlin/NF2 in the Hippo pathway
Cell Res., 25, 2015
8X7T
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BU of 8x7t by Molmil
MCM in the Apo state.
Descriptor: mini-chromosome maintenance complex 3
Authors:Ma, J, Yi, G, Ye, M, MacGregor-Chatwin, C, Sheng, Y, Lu, Y, Li, M, Gilbert, R.J.C, Zhang, P.
Deposit date:2023-11-25
Release date:2024-01-17
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:MCM in the Apo state
To Be Published
8X7U
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BU of 8x7u by Molmil
MCM in complex with dsDNA in presence of ATP.
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, mini-chromosome maintenance complex 3
Authors:Ma, J, Yi, G, Ye, M, MacGregor-Chatwin, C, Sheng, Y, Lu, Y, Li, M, Gilbert, R.J.C, Zhang, P.
Deposit date:2023-11-25
Release date:2024-01-17
Method:ELECTRON MICROSCOPY (3.57 Å)
Cite:MCM in complex with dsDNA in presence of ATP
To Be Published
4ZRJ
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BU of 4zrj by Molmil
Structure of Merlin-FERM and CTD
Descriptor: GLYCEROL, Merlin
Authors:Lin, Z, Li, F, Long, J, Shen, Y.
Deposit date:2015-05-12
Release date:2015-06-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Angiomotin binding-induced activation of Merlin/NF2 in the Hippo pathway
Cell Res., 25, 2015
4ROU
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BU of 4rou by Molmil
Auto-inhibition Mechanism of Human Mitochondrial RNase P Protein Complex
Descriptor: CHLORIDE ION, Mitochondrial ribonuclease P protein 3, ZINC ION
Authors:Li, F, Liu, X, Yang, X, Shen, Y.
Deposit date:2014-10-29
Release date:2015-11-04
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.713 Å)
Cite:Auto-inhibition Mechanism of Human Mitochondrial RNase P Protein Complex
TO BE PUBLISHED
7CZB
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BU of 7czb by Molmil
The cryo-EM structure of the ERAD retrotranslocation channel formed by human Derlin-1
Descriptor: Derlin-1
Authors:Rao, B, Li, S, Yao, D, Wang, Q, Xia, Y, Jia, Y, Shen, Y, Cao, Y.
Deposit date:2020-09-07
Release date:2021-03-17
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:The cryo-EM structure of an ERAD protein channel formed by tetrameric human Derlin-1.
Sci Adv, 7, 2021
7F3X
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BU of 7f3x by Molmil
Lysophospholipid acyltransferase LPCAT3 in complex with lysophosphatidylcholine
Descriptor: LPCAT3, [2-((1-OXODODECANOXY-(2-HYDROXY-3-PROPANYL))-PHOSPHONATE-OXY)-ETHYL]-TRIMETHYLAMMONIUM
Authors:Zhang, Q, Yao, D, Rao, B, Li, S, Jian, L, Chen, Y, Hu, K, Xia, Y, Shen, Y, Cao, Y.
Deposit date:2021-06-17
Release date:2021-12-01
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.57 Å)
Cite:The structural basis for the phospholipid remodeling by lysophosphatidylcholine acyltransferase 3.
Nat Commun, 12, 2021
7F40
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BU of 7f40 by Molmil
Lysophospholipid acyltransferase LPCAT3 in a complex with Arachidonoyl-CoA
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, LPCAT3, S-[2-[3-[[(2R)-4-[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethyl] (5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenethioate
Authors:Zhang, Q, Yao, D, Rao, B, Li, S, Jian, L, Chen, Y, Hu, K, Xia, Y, Shen, Y, Cao, Y.
Deposit date:2021-06-17
Release date:2021-12-01
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:The structural basis for the phospholipid remodeling by lysophosphatidylcholine acyltransferase 3.
Nat Commun, 12, 2021
4XFV
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BU of 4xfv by Molmil
Crystal Structure of Elp2
Descriptor: Elongator complex protein 2
Authors:Lin, Z, Dong, C, Long, J, Shen, Y.
Deposit date:2014-12-29
Release date:2015-05-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The elp2 subunit is essential for elongator complex assembly and functional regulation
Structure, 23, 2015
4Y21
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BU of 4y21 by Molmil
Crystal Structure of Munc13-1 MUN domain
Descriptor: Protein unc-13 homolog A
Authors:Yang, X.Y, Wang, S, Sheng, Y, Zhang, M, Zou, W.J, Wu, L.J, Kang, L.J, Rizo, J, Zhang, R.G, Xu, T, Ma, C.
Deposit date:2015-02-09
Release date:2015-06-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Syntaxin opening by the MUN domain underlies the function of Munc13 in synaptic-vesicle priming.
Nat.Struct.Mol.Biol., 22, 2015
5A5U
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BU of 5a5u by Molmil
Structure of mammalian eIF3 in the context of the 43S preinitiation complex
Descriptor: EUKARYOTIC INITIATION FACTOR 3, EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT B, EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I
Authors:des-Georges, A, Dhote, V, Kuhn, L, Hellen, C.U.T, Pestova, T.V, Frank, J, Hashem, Y.
Deposit date:2015-06-21
Release date:2015-09-09
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Structure of Mammalian Eif3 in the Context of the 43S Preinitiation Complex.
Nature, 525, 2015

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PDB entries from 2024-09-11

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