Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2IEF
DownloadVisualize
BU of 2ief by Molmil
Structure of the cooperative Excisionase (Xis)-DNA complex reveals a micronucleoprotein filament
Descriptor: 15-mer DNA, 19-mer DNA, 34-mer DNA, ...
Authors:Abbani, M.A, Papagiannis, C.V, Sam, M.D, Cascio, D, Johnson, R.C, Clubb, R.T.
Deposit date:2006-09-18
Release date:2007-02-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Structure of the cooperative Xis-DNA complex reveals a micronucleoprotein filament that regulates phage lambda intasome assembly.
Proc.Natl.Acad.Sci.Usa, 104, 2007
6EER
DownloadVisualize
BU of 6eer by Molmil
Structure of glycine-bound GoxA from Pseudoalteromonas luteoviolacea
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GoxA, ...
Authors:Yukl, E.T, Avalos, D.
Deposit date:2018-08-15
Release date:2019-01-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Structural and Spectroscopic Characterization of a Product Schiff Base Intermediate in the Reaction of the Quinoprotein Glycine Oxidase, GoxA.
Biochemistry, 58, 2019
2J91
DownloadVisualize
BU of 2j91 by Molmil
Crystal structure of Human Adenylosuccinate Lyase in complex with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, ADENYLOSUCCINATE LYASE, CHLORIDE ION, ...
Authors:Stenmark, P, Moche, M, Arrowsmith, C, Berglund, H, Busam, R, Collins, R, Edwards, A, Ericsson, U.B, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Hallberg, B.M, Holmberg Schiavone, L, Hogbom, M, Johansson, I, Karlberg, T, Kosinska, U, Kotenyova, T, Magnusdottir, A, Nilsson, M.E, Nilsson-Ehle, P, Nyman, T, Ogg, D, Persson, C, Sagemark, J, Sundstrom, M, Uppenberg, J, Uppsten, M, Thorsell, A.G, van Den Berg, S, Wallden, K, Weigelt, J, Nordlund, P.
Deposit date:2006-11-01
Release date:2006-11-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Human Adenylosuccinate Lyase
To be Published
6EL5
DownloadVisualize
BU of 6el5 by Molmil
Estimation of relative drug-target residence times by random acceleration molecular dynamics simulation
Descriptor: 8-(2-CHLORO-3,4,5-TRIMETHOXY-BENZYL)-2-FLUORO-9-PENT-4-YLNYL-9H-PURIN-6-YLAMINE, Heat shock protein HSP 90-alpha
Authors:Musil, D, Lehmann, M, Eggenweiler, H.-M.
Deposit date:2017-09-27
Release date:2018-05-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Estimation of Drug-Target Residence Times by tau-Random Acceleration Molecular Dynamics Simulations.
J Chem Theory Comput, 14, 2018
2IJ3
DownloadVisualize
BU of 2ij3 by Molmil
Structure of the A264H mutant of cytochrome P450 BM3
Descriptor: Cytochrome P450 BM3, PROTOPORPHYRIN IX CONTAINING FE
Authors:Toogood, H.S, Leys, D.
Deposit date:2006-09-29
Release date:2006-11-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and spectroscopic characterization of P450 BM3 mutants with unprecedented P450 heme iron ligand sets. New heme ligation states influence conformational equilibria in P450 BM3.
J.Biol.Chem., 282, 2007
2IJR
DownloadVisualize
BU of 2ijr by Molmil
Crystal structure of a protein api92 from Yersinia pseudotuberculosis, Pfam DUF1281
Descriptor: Hypothetical protein api92
Authors:Jin, X, Min, T, Bonanno, J.B, Sauder, J.M, Wasserman, S, Smith, D, Burley, S.K, Shapiro, L, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-09-30
Release date:2006-10-31
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of a hypothetical protein from Yersinia pseudotuberculosis
To be Published
6ENY
DownloadVisualize
BU of 6eny by Molmil
Structure of the human PLC editing module
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, Calreticulin, ...
Authors:Trowitzsch, S, Januliene, D, Blees, A, Moeller, A, Tampe, R.
Deposit date:2017-10-07
Release date:2017-11-29
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (5.8 Å)
Cite:Structure of the human MHC-I peptide-loading complex.
Nature, 551, 2017
6EOE
DownloadVisualize
BU of 6eoe by Molmil
Crystal structure of AMPylated GRP78 with nucleotide
Descriptor: 78 kDa glucose-regulated protein, ADENOSINE-5'-DIPHOSPHATE, CITRATE ANION, ...
Authors:Yan, Y, Preissler, S, Ron, D, Read, R.J.
Deposit date:2017-10-09
Release date:2017-11-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:AMPylation targets the rate-limiting step of BiP's ATPase cycle for its functional inactivation.
Elife, 6, 2017
6EP3
DownloadVisualize
BU of 6ep3 by Molmil
Lar controls the expression of the Listeria monocytogenes agr system and mediates virulence.
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Lmo0651 protein, ...
Authors:Pinheiro, J, Lisboa, J, Carvalho, F, Carreaux, A, Santos, N, Cabral, J, Sousa, S, Cabanes, D.
Deposit date:2017-10-10
Release date:2018-07-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:MouR controls the expression of the Listeria monocytogenes Agr system and mediates virulence.
Nucleic Acids Res., 46, 2018
2J1S
DownloadVisualize
BU of 2j1s by Molmil
Structure of a Streptococcus pneumoniae fucose binding module in complex with fucose
Descriptor: CALCIUM ION, FUCOLECTIN-RELATED PROTEIN, beta-L-fucopyranose
Authors:Boraston, A.B, Wang, D, Burke, R.D.
Deposit date:2006-08-15
Release date:2006-09-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Blood Group Antigen Recognition by a Streptococcus Pneumoniae Virulence Factor
J.Biol.Chem., 281, 2006
6EJL
DownloadVisualize
BU of 6ejl by Molmil
Structure of 14-3-3 zeta in complex with ASK1 14-3-3 binding motif
Descriptor: 14-3-3 protein zeta/delta, Mitogen-activated protein kinase kinase kinase 5
Authors:Petrvalska, O, Lentini Santo, D, Obsilova, V, Obsil, T.
Deposit date:2017-09-21
Release date:2017-11-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.382 Å)
Cite:Crystal structure of 14-3-3 zeta in complex with ASK1 14-3-3 binding motif
To Be Published
2IJ4
DownloadVisualize
BU of 2ij4 by Molmil
Structure of the A264K mutant of cytochrome P450 BM3
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, cytochrome P450 BM3
Authors:Toogood, H.S, Leys, D.
Deposit date:2006-09-29
Release date:2006-11-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and spectroscopic characterization of P450 BM3 mutants with unprecedented P450 heme iron ligand sets. New heme ligation states influence conformational equilibria in P450 BM3.
J.Biol.Chem., 282, 2007
6EHV
DownloadVisualize
BU of 6ehv by Molmil
scFv AbVance: increasing our knowledge of antibody structural space to enable faster and better decision making in drug discovery
Descriptor: scFv AbVance: increasing our knowledge of antibody structural space to enable faster and better decision making in drug discovery
Authors:Hargreaves, D.
Deposit date:2017-09-15
Release date:2017-11-08
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:scFv AbVance: increasing our knowledge of antibody structural space to enable faster and better decision making in drug discovery
To Be Published
2IRV
DownloadVisualize
BU of 2irv by Molmil
Crystal structure of GlpG, a rhomboid intramembrane serine protease
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, DODECYL-BETA-D-MALTOSIDE, LAURYL DIMETHYLAMINE-N-OXIDE, ...
Authors:Bibi, E, Fass, D, Ben-Shem, A.
Deposit date:2006-10-16
Release date:2006-10-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for intramembrane proteolysis by rhomboid serine proteases.
Proc.Natl.Acad.Sci.Usa, 104, 2007
6ERQ
DownloadVisualize
BU of 6erq by Molmil
Structure of the human mitochondrial transcription initiation complex at the HSP promoter
Descriptor: DNA-directed RNA polymerase, mitochondrial, Dimethyladenosine transferase 2, ...
Authors:Hillen, H.S, Morozov, Y.I, Sarfallah, A, Temiakov, D, Cramer, P.
Deposit date:2017-10-18
Release date:2017-11-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (4.5 Å)
Cite:Structural Basis of Mitochondrial Transcription Initiation.
Cell, 171, 2017
6E67
DownloadVisualize
BU of 6e67 by Molmil
Structure of beta2 adrenergic receptor fused to a Gs peptide
Descriptor: 8-[(1R)-2-{[1,1-dimethyl-2-(2-methylphenyl)ethyl]amino}-1-hydroxyethyl]-5-hydroxy-2H-1,4-benzoxazin-3(4H)-one, Beta-2 adrenergic receptor,Endolysin,Guanine nucleotide-binding protein G(s) subunit alpha isoforms short,Beta-2 adrenergic receptor chimera
Authors:Liu, X, Xu, X, Hilger, D, Tiemann, J, Liu, H, Du, Y, Hirata, K, Sun, X, Guixa-Gonzalez, R, Mathiesen, J, Hildebrand, P, Kobilka, B.
Deposit date:2018-07-24
Release date:2019-06-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Structural Insights into the Process of GPCR-G Protein Complex Formation.
Cell, 177, 2019
2IUR
DownloadVisualize
BU of 2iur by Molmil
CRYSTAL STRUCTURE OF N-QUINOL FORM OF AROMATIC AMINE DEHYDROGENASE (AADH) FROM ALCALIGENES FAECALIS, FORM A COCRYSTAL
Descriptor: AROMATIC AMINE DEHYDROGENASE ALPHA SUBUNIT, AROMATIC AMINE DEHYDROGENASE BETA SUBUNIT
Authors:Roujeinikova, A, Scrutton, N, Leys, D.
Deposit date:2006-06-07
Release date:2006-09-20
Last modified:2019-02-06
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Atomic Level Insight Into the Oxidative Half-Reaction of Aromatic Amine Dehydrogenase.
J.Biol.Chem., 281, 2006
2J14
DownloadVisualize
BU of 2j14 by Molmil
3,4,5-Trisubstituted Isoxazoles as Novel PPARdelta Agonists: Part2
Descriptor: (3-{4-[2-(2,4-DICHLORO-PHENOXY)-ETHYLCARBAMOYL]-5-PHENYL-ISOXAZOL-3-YL}-PHENYL)-ACETIC ACID, PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR DELTA
Authors:Epple, R, Azimioara, M, Russo, R, Xie, Y, Wang, X, Cow, C, Wityak, J, Karanewsky, D, Bursulaya, B, Kreusch, A, Tuntland, T, Gerken, A, Iskandar, M, Saez, E, Seidel, H.M, Tian, S.S.
Deposit date:2006-08-08
Release date:2006-09-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:3,4,5-Trisubstituted Isoxazoles as Novel Ppardelta Agonists. Part 2
Bioorg.Med.Chem.Lett., 16, 2006
6E9C
DownloadVisualize
BU of 6e9c by Molmil
Selenomethionine Derivative Structure of A Bacterial Homolog to Human Lysosomal Transporter, Spinster
Descriptor: Major facilitator family transporter
Authors:Zhou, F, Yao, D, Rao, B, Zhang, L, Cao, Y.
Deposit date:2018-07-31
Release date:2019-08-14
Last modified:2020-01-08
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of a bacterial homolog to human lysosomal transporter, spinster
Sci Bull (Beijing), 64, 2019
6E9T
DownloadVisualize
BU of 6e9t by Molmil
DHF58 filament
Descriptor: DHF58 filament
Authors:Lynch, E.M, Shen, H, Fallas, J.A, Kollman, J.M, Baker, D.
Deposit date:2018-08-01
Release date:2018-11-21
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (5.4 Å)
Cite:De novo design of self-assembling helical protein filaments.
Science, 362, 2018
2J95
DownloadVisualize
BU of 2j95 by Molmil
CRYSTAL STRUCTURE OF A HUMAN FACTOR XA INHIBITOR COMPLEX
Descriptor: 5'-CHLORO-N-{(3S)-1-[(1S)-1-METHYL-2-MORPHOLIN-4-YL-2-OXOETHYL]-2-OXOPYRROLIDIN-3-YL}-2,2'-BITHIOPHENE-5-SULFONAMIDE, ACTIVATED FACTOR XA HEAVY CHAIN, ACTIVATED FACTOR XA LIGHT CHAIN, ...
Authors:Chan, C, Borthwick, A.D, Brown, D, Campbell, M, Chaudry, L, Chung, C.W, Convery, M.A, Hamblin, J.N, Johnstone, L, Kelly, H.A, Kleanthous, S, Burns-Kurtis, C.L, Patikis, A, Patel, C, Pateman, A.J, Senger, S, Shah, G.P, Toomey, J.R, Watson, N.S, Weston, H.E, Whitworth, C, Young, R.J, Zhou, P.
Deposit date:2006-11-02
Release date:2007-03-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Factor Xa Inhibitors: S1 Binding Interactions of a Series of N-{(3S)-1-[(1S)-1-Methyl-2-Morpholin-4-Yl-2-Oxoethyl]-2-Oxopyrrolidin-3-Yl}Sulfonamides.
J.Med.Chem., 50, 2007
6EHW
DownloadVisualize
BU of 6ehw by Molmil
scFv AbVance: increasing our knowledge of antibody structural space to enable faster and better decision making in drug discovery
Descriptor: scFv AbVance: increasing our knowledge of antibody structural space to enable faster and better decision making in drug discovery
Authors:Hargreaves, D.
Deposit date:2017-09-15
Release date:2017-11-08
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:scFv AbVance: increasing our knowledge of antibody structural space to enable faster and better decision making in drug discovery
To Be Published
2II0
DownloadVisualize
BU of 2ii0 by Molmil
Crystal Structure of catalytic domain of Son of sevenless (Rem-Cdc25) in the absence of Ras
Descriptor: Son of sevenless homolog 1
Authors:Freedman, T.S, Sondermann, H, Friedland, G.D, Kortemme, T, Bar-Sagi, D, Marqusee, S, Kuriyan, J.
Deposit date:2006-09-27
Release date:2006-10-31
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:A Ras-induced conformational switch in the Ras activator Son of sevenless.
Proc.Natl.Acad.Sci.Usa, 103, 2006
6EI2
DownloadVisualize
BU of 6ei2 by Molmil
Crystal Structure of HLA-A68 presenting a C-terminally extended peptide
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, CADMIUM ION, ...
Authors:Picaud, S, Guillaume, P, Pike, A.C.W, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Gfeller, D, Filippakopoulos, P.
Deposit date:2017-09-16
Release date:2017-10-11
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Crystal Structure of HLA-A68 presenting a C-terminally extended peptide
To Be Published
2IJ5
DownloadVisualize
BU of 2ij5 by Molmil
Crystal structure of cytochrome P450 CYP121, P212121 space group
Descriptor: Cytochrome P450 121, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Roujeinikova, A, Leys, D.
Deposit date:2006-09-29
Release date:2006-11-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the Mycobacterium tuberculosis P450 CYP121-fluconazole complex reveals new azole drug-P450 binding mode.
J.Biol.Chem., 281, 2006

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon