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4L9O
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BU of 4l9o by Molmil
Crystal Structure of the Sec13-Sec16 blade-inserted complex from Pichia pastoris
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:McMahon, C, Jeffrey, P.D, Hughson, F.M.
Deposit date:2013-06-18
Release date:2013-10-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Sec16 influences transitional ER sites by regulating rather than organizing COPII.
Mol Biol Cell, 24, 2013
4JNK
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BU of 4jnk by Molmil
Lactate Dehydrogenase A in complex with inhibitor compound 22
Descriptor: (2R)-2-{[5-cyano-4-(3,4-dichlorophenyl)-6-oxo-1,6-dihydropyrimidin-2-yl]sulfanyl}-N-(4-sulfamoylphenyl)propanamide, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Eigenbrot, C, Ultsch, M.
Deposit date:2013-03-15
Release date:2013-05-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.896 Å)
Cite:Identification of substituted 2-thio-6-oxo-1,6-dihydropyrimidines as inhibitors of human lactate dehydrogenase.
Bioorg.Med.Chem.Lett., 23, 2013
6K4L
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BU of 6k4l by Molmil
Crystal structure of Se-labelled SidJ complex with CaM at 2.95 A
Descriptor: CALCIUM ION, CHLORIDE ION, Calmodulin-1, ...
Authors:Ouyang, S.Y.
Deposit date:2019-05-24
Release date:2019-07-24
Last modified:2019-08-28
Method:X-RAY DIFFRACTION (2.949 Å)
Cite:Regulation of phosphoribosyl ubiquitination by a calmodulin-dependent glutamylase.
Nature, 572, 2019
4L1S
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BU of 4l1s by Molmil
Covalent modification of transthyretin K15 by yielding the fluorescent conjugate (E)-3-(dimethylamino)-5-(4-hydroxy-3,5-dimethylstyryl)benzamide
Descriptor: S-(4-fluorophenyl) 3-(dimethylamino)-5-[(E)-2-(4-hydroxy-3,5-dimethylphenyl)ethenyl]benzenecarbothioate, Transthyretin
Authors:Connelly, S, Wilson, I.A.
Deposit date:2013-06-03
Release date:2013-10-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Fluorogenic small molecules requiring reaction with a specific protein to create a fluorescent conjugate for biological imaging-what we know and what we need to learn.
Biopolymers, 101, 2014
8GA6
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BU of 8ga6 by Molmil
Geometrically programmable nanomaterial construction using regularized protein building blocks
Descriptor: THR6
Authors:Huddy, T, Bera, A.K, Baker, D, Kang, A.
Deposit date:2023-02-22
Release date:2024-03-13
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Blueprinting extendable nanomaterials with standardized protein blocks.
Nature, 627, 2024
8G9K
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BU of 8g9k by Molmil
Geometrically programmable nanomaterial construction using regularized protein building blocks
Descriptor: THR2
Authors:Bera, A.K, Huddy, T, Baker, D, Kang, A.
Deposit date:2023-02-21
Release date:2024-03-13
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Blueprinting extendable nanomaterials with standardized protein blocks.
Nature, 627, 2024
6IER
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BU of 6ier by Molmil
Apo structure of a beta-glucosidase 1317
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, beta-glucosidase 1317
Authors:Xie, W, Liu, X.
Deposit date:2018-09-16
Release date:2019-07-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.246 Å)
Cite:Improving the cellobiose-hydrolysis activity and glucose-tolerance of a thermostable beta-glucosidase through rational design.
Int.J.Biol.Macromol., 136, 2019
4MBZ
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BU of 4mbz by Molmil
Structure of B-Lymphotropic Polyomavirus VP1 in complex with 3'-sialyllactosamine
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Khan, Z.M, Neu, U, Stehle, T.
Deposit date:2013-08-21
Release date:2013-12-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structures of B-Lymphotropic Polyomavirus VP1 in Complex with Oligosaccharide Ligands.
Plos Pathog., 9, 2013
6K4R
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BU of 6k4r by Molmil
Crystal structure of SidJ-CaM-AMP ternary complex at 3.11 A
Descriptor: ADENOSINE MONOPHOSPHATE, CALCIUM ION, CHLORIDE ION, ...
Authors:Ouyang, S.Y.
Deposit date:2019-05-26
Release date:2019-07-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.109 Å)
Cite:Regulation of phosphoribosyl ubiquitination by a calmodulin-dependent glutamylase.
Nature, 572, 2019
6K4K
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BU of 6k4k by Molmil
Crystal structure of SidJ-CaM binary complex at 2.71 A
Descriptor: CALCIUM ION, Calmodulin-1, SidJ
Authors:Ouyang, S.Y.
Deposit date:2019-05-24
Release date:2019-07-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.715 Å)
Cite:Regulation of phosphoribosyl ubiquitination by a calmodulin-dependent glutamylase.
Nature, 572, 2019
4I7A
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BU of 4i7a by Molmil
GrpN pentameric microcompartment shell protein from Rhodospirillum rubrum
Descriptor: CHLORIDE ION, Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
Authors:Wheatley, N.M, Gidaniyan, S.D, Cascio, D, Yeates, T.O.
Deposit date:2012-11-30
Release date:2013-05-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Bacterial microcompartment shells of diverse functional types possess pentameric vertex proteins.
Protein Sci., 22, 2013
4MBX
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BU of 4mbx by Molmil
Structure of unliganded B-Lymphotropic Polyomavirus VP1
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Major Capsid Protein VP1
Authors:Khan, Z.M, Neu, U, Schuch, B, Stehle, T.
Deposit date:2013-08-21
Release date:2013-12-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structures of B-Lymphotropic Polyomavirus VP1 in Complex with Oligosaccharide Ligands.
Plos Pathog., 9, 2013
4MBY
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BU of 4mby by Molmil
Structure of B-Lymphotropic Polyomavirus VP1 in complex with 3'-sialyllactose
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Khan, Z.M, Neu, U, Stehle, T.
Deposit date:2013-08-21
Release date:2013-12-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Structures of B-Lymphotropic Polyomavirus VP1 in Complex with Oligosaccharide Ligands.
Plos Pathog., 9, 2013
7EN6
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BU of 7en6 by Molmil
The crystal structure of Escherichia coli MurR in apo form
Descriptor: HTH-type transcriptional regulator MurR, PHOSPHATE ION
Authors:Zhang, Y, Chen, W, Ji, Q.
Deposit date:2021-04-16
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.276 Å)
Cite:Molecular basis for cell-wall recycling regulation by transcriptional repressor MurR in Escherichia coli.
Nucleic Acids Res., 50, 2022
7EN5
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BU of 7en5 by Molmil
The crystal structure of Escherichia coli MurR in complex with N-acetylglucosamine-6-phosphate
Descriptor: 2-METHOXYETHANOL, 2-acetamido-2-deoxy-6-O-phosphono-beta-D-glucopyranose, GLYCEROL, ...
Authors:Zhang, Y, Chen, W, Ji, Q.
Deposit date:2021-04-16
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Molecular basis for cell-wall recycling regulation by transcriptional repressor MurR in Escherichia coli.
Nucleic Acids Res., 50, 2022
7EN7
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BU of 7en7 by Molmil
The crystal structure of Escherichia coli MurR in complex with N-acetylmuramic-acid-6-phosphate
Descriptor: (2R)-2-[(2R,3R,4R,5S,6R)-3-acetamido-2,5-bis(oxidanyl)-6-(phosphonooxymethyl)oxan-4-yl]oxypropanoic acid, HTH-type transcriptional regulator MurR
Authors:Zhang, Y, Chen, W, Ji, Q.
Deposit date:2021-04-16
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Molecular basis for cell-wall recycling regulation by transcriptional repressor MurR in Escherichia coli.
Nucleic Acids Res., 50, 2022
8JJB
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BU of 8jjb by Molmil
Crystal structure of T2R-TTL-Y61 complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:Yang, J.
Deposit date:2023-05-30
Release date:2024-03-27
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Structure-based design and synthesis of BML284 derivatives: A novel class of colchicine-site noncovalent tubulin degradation agents.
Eur.J.Med.Chem., 268, 2024
8JJC
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BU of 8jjc by Molmil
Tubulin-Y62
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-(6,7-dimethoxy-3,4-dihydro-1~{H}-isoquinolin-2-yl)-6-(3-methoxyphenyl)pyrimidin-2-amine, CALCIUM ION, ...
Authors:Yang, J.
Deposit date:2023-05-30
Release date:2024-03-27
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Structure-based design and synthesis of BML284 derivatives: A novel class of colchicine-site noncovalent tubulin degradation agents.
Eur.J.Med.Chem., 268, 2024
4FQ2
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BU of 4fq2 by Molmil
Crystal Structure of 10-1074 Fab
Descriptor: 1,2-ETHANEDIOL, Fab heavy chain, Fab light chain, ...
Authors:Scharf, L, Bjorkman, P.J.
Deposit date:2012-06-24
Release date:2012-11-14
Last modified:2021-05-19
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Complex-type N-glycan recognition by potent broadly neutralizing HIV antibodies.
Proc.Natl.Acad.Sci.USA, 109, 2012
7F6G
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BU of 7f6g by Molmil
Cryo-EM structure of human angiotensin receptor AT1R in complex Gq proteins and Sar1-AngII
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin receptor AT1R, CHOLESTEROL, ...
Authors:Zhang, D, Xu, L, Zhan, Y, Guo, J, Zhang, H.
Deposit date:2021-06-25
Release date:2023-03-29
Last modified:2023-10-18
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural insights into angiotensin receptor signaling modulation by balanced and biased agonists.
Embo J., 42, 2023
4FQC
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BU of 4fqc by Molmil
Crystal Structure of PGT121 Fab Bound to a complex-type sialylated N-glycan
Descriptor: Fab heavy chain, Fab light chain, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Scharf, L, Bjorkman, P.J.
Deposit date:2012-06-25
Release date:2012-11-14
Last modified:2021-05-19
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Complex-type N-glycan recognition by potent broadly neutralizing HIV antibodies.
Proc.Natl.Acad.Sci.USA, 109, 2012
4FQQ
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BU of 4fqq by Molmil
Crystal Structure of Germline Antibody PGT121-GL Fab
Descriptor: Fab heavy chain, Fab light chain, SODIUM ION
Authors:Scharf, L, Bjorkman, P.J.
Deposit date:2012-06-25
Release date:2012-11-14
Last modified:2021-05-19
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Complex-type N-glycan recognition by potent broadly neutralizing HIV antibodies.
Proc.Natl.Acad.Sci.USA, 109, 2012
4GU3
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BU of 4gu3 by Molmil
Crystal structure of the T1L reovirus attachment protein sigma1 in complex with the GM2 glycan
Descriptor: N-acetyl-alpha-neuraminic acid-(2-3)-[2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)]beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, Outer capsid protein sigma-1
Authors:Reiss, K, Stehle, T.
Deposit date:2012-08-29
Release date:2012-12-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:The GM2 Glycan Serves as a Functional Coreceptor for Serotype 1 Reovirus.
Plos Pathog., 8, 2012
7CE3
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BU of 7ce3 by Molmil
Crystal structure of human IDH3 holoenzyme in APO form.
Descriptor: Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, Isocitrate dehydrogenase [NAD] subunit beta, ...
Authors:Sun, P.K, Ding, J.P.
Deposit date:2020-06-21
Release date:2021-01-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.472 Å)
Cite:Structure and allosteric regulation of human NAD-dependent isocitrate dehydrogenase.
Cell Discov, 6, 2020
7B6S
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BU of 7b6s by Molmil
Sheep Polyomavirus VP1 in complex with 10 mM Forssman antigen pentaose
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose, ...
Authors:Rustmeier, N.H, Stehle, T.
Deposit date:2020-12-08
Release date:2022-09-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.923 Å)
Cite:A novel and highly specific Forssman antigen-binding protein from sheep polyomavirus
Biorxiv, 2023

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PDB entries from 2024-08-28

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