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2LKR
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BU of 2lkr by Molmil
Yeast U2/U6 complex
Descriptor: RNA (111-MER)
Authors:Burke, J.E, Sashital, D.G, Zuo, X, Wang, Y, Butcher, S.E.
Deposit date:2011-10-19
Release date:2012-02-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of the yeast U2/U6 snRNA complex.
Rna, 18, 2012
2LK3
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BU of 2lk3 by Molmil
U2/U6 Helix I
Descriptor: RNA (5'-R(*GP*GP*CP*UP*UP*AP*GP*AP*UP*CP*AP*GP*AP*AP*AP*UP*GP*AP*UP*CP*AP*GP*CP*C)-3')
Authors:Burke, J.E, Sashital, D.G, Zuo, X.E, Wang, Y, Butcher, S.E.
Deposit date:2011-10-03
Release date:2012-02-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of the yeast U2/U6 snRNA complex.
Rna, 18, 2012
5YLS
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BU of 5yls by Molmil
Crystal structure of T2R-TTL-Y50 complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, E-3-(3-azanyl-4-methoxy-phenyl)-1-(5-methoxy-2,2-dimethyl-chromen-8-yl)prop-2-en-1-one, ...
Authors:Yang, J.H, Chen, L.J.
Deposit date:2017-10-18
Release date:2018-04-11
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:The compound millepachine and its derivatives inhibit tubulin polymerization by irreversibly binding to the colchicine-binding site in beta-tubulin.
J. Biol. Chem., 293, 2018
5YLJ
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BU of 5ylj by Molmil
Crystal structure of T2R-TTL-Millepachine complex
Descriptor: (E)-1-(5-methoxy-2,2-dimethyl-chromen-8-yl)-3-(4-methoxyphenyl)prop-2-en-1-one, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Yang, J.H, Chen, L.J.
Deposit date:2017-10-17
Release date:2018-04-11
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The compound millepachine and its derivatives inhibit tubulin polymerization by irreversibly binding to the colchicine-binding site in beta-tubulin.
J. Biol. Chem., 293, 2018
5YWG
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BU of 5ywg by Molmil
Crystal structure of Arabidopsis thaliana HPPD complexed with Mesotrione
Descriptor: 2-[(4-methylsulfonyl-2-nitro-phenyl)-oxidanyl-methylidene]cyclohexane-1,3-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Lin, H.Y, Yang, W.C.
Deposit date:2017-11-29
Release date:2019-01-16
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.603 Å)
Cite:Molecular insights into the mechanism of 4-hydroxyphenylpyruvate dioxygenase inhibition: enzyme kinetics, X-ray crystallography and computational simulations.
FEBS J., 286, 2019
6ISD
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BU of 6isd by Molmil
Crystal structure of Arabidopsis thaliana HPPD complexed with sulcotrione
Descriptor: 2-[2-chloro-4-(methylsulfonyl)benzoyl]cyclohexane-1,3-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Yang, W.C, Yang, G.F.
Deposit date:2018-11-16
Release date:2018-11-28
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular insights into the mechanism of 4-hydroxyphenylpyruvate dioxygenase inhibition: enzyme kinetics, X-ray crystallography and computational simulations.
FEBS J., 286, 2019
5T16
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BU of 5t16 by Molmil
Crystal structure of yeast RNase III (Rnt1p) complexed with a non-hydrolyzable RNA substrate analog
Descriptor: 1,2-ETHANEDIOL, RNA substrate analog, Ribonuclease 3
Authors:Song, H, Ji, X.
Deposit date:2016-08-18
Release date:2017-02-08
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.783 Å)
Cite:The Functional Cycle of Rnt1p: Five Consecutive Steps of Double-Stranded RNA Processing by a Eukaryotic RNase III.
Structure, 25, 2017
6J63
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BU of 6j63 by Molmil
Crystal structure of Arabidopsis thaliana HPPD complexed with NTBC
Descriptor: 2-{HYDROXY[2-NITRO-4-(TRIFLUOROMETHYL)PHENYL]METHYLENE}CYCLOHEXANE-1,3-DIONE, 4-hydroxyphenylpyruvate dioxygenase, FE (III) ION
Authors:Yang, W.C, Yang, G.F.
Deposit date:2019-01-13
Release date:2019-02-06
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.624 Å)
Cite:Molecular insights into the mechanism of 4-hydroxyphenylpyruvate dioxygenase inhibition: enzyme kinetics, X-ray crystallography and computational simulations.
FEBS J., 286, 2019
3US9
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BU of 3us9 by Molmil
Crystal Structure of the NCX1 Intracellular Tandem Calcium Binding Domains(CBD12)
Descriptor: CALCIUM ION, Sodium/calcium exchanger 1
Authors:Giladi, M, Sasson, Y, Hirsch, J.A, Khananshvili, D.
Deposit date:2011-11-23
Release date:2012-07-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:A common Ca2+-driven interdomain module governs eukaryotic NCX regulation.
Plos One, 7, 2012
3WSQ
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BU of 3wsq by Molmil
Structure of HER2 with an Fab
Descriptor: Antibody Heavy Chain, Antibody Light Chain, Receptor tyrosine-protein kinase erbB-2
Authors:Fu, W.Y, Wang, Y.X, Zhou, L.J.
Deposit date:2014-03-20
Release date:2015-03-25
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Insights into HER2 signaling from step-by-step optimization of anti-HER2 antibodies.
MAbs, 6, 2014
7UHE
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BU of 7uhe by Molmil
Taf14 ET domain in complex with C-terminal tail of Taf2
Descriptor: C-terminal tail of Transcription initiation factor TFIID subunit 2, Transcription initiation factor TFIID subunit 14
Authors:Klein, B.J, Kutateladze, T.G.
Deposit date:2022-03-26
Release date:2022-08-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Taf2 mediates DNA binding of Taf14.
Nat Commun, 13, 2022
6VWT
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BU of 6vwt by Molmil
Transitional unit cell 1 of adenine riboswitch aptamer crystal phase transition upon ligand binding
Descriptor: ADENINE, MAGNESIUM ION, adenine riboswitch aptamer variant
Authors:Stagno, J.R, Wang, Y.-X.
Deposit date:2020-02-20
Release date:2020-11-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:Synchronous RNA conformational changes trigger ordered phase transitions in crystals.
Nat Commun, 12, 2021
6VWV
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BU of 6vwv by Molmil
Transitional unit cell 2 of adenine riboswitch aptamer crystal phase transition upon ligand binding
Descriptor: ADENINE, MAGNESIUM ION, POTASSIUM ION, ...
Authors:Stagno, J.R, Wang, Y.-X.
Deposit date:2020-02-20
Release date:2020-11-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3 Å)
Cite:Synchronous RNA conformational changes trigger ordered phase transitions in crystals.
Nat Commun, 12, 2021
6WJS
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BU of 6wjs by Molmil
Apo structure of the FMN riboswitch aptamer domain in the presence of phosphate
Descriptor: PHOSPHATE ION, RNA (112-MER)
Authors:Wilt, H.M, Wang, Y.-X, Stagno, J.R.
Deposit date:2020-04-14
Release date:2020-09-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:FMN riboswitch aptamer symmetry facilitates conformational switching through mutually exclusive coaxial stacking configurations.
J Struct Biol X, 4, 2020
2L3R
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BU of 2l3r by Molmil
NMR structure of UHRF1 Tandem Tudor Domains in a complex with Histone H3 peptide
Descriptor: E3 ubiquitin-protein ligase UHRF1, Histone H3
Authors:Nady, N, Lemak, A, Fares, C, Gutmanas, A, Avvakumov, G, Xue, S, Arrowsmith, C, Structural Genomics Consortium (SGC)
Deposit date:2010-09-21
Release date:2011-04-13
Last modified:2025-03-26
Method:SOLUTION NMR
Cite:Recognition of Multivalent Histone States Associated with Heterochromatin by UHRF1 Protein.
J.Biol.Chem., 286, 2011
8ZBL
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BU of 8zbl by Molmil
Glycosidated glycyrrhetinic acid derivative as a soluble epoxide hydrolase inhibitor
Descriptor: 1-[[(2~{S},4~{a}~{S},6~{a}~{R},6~{a}~{S},6~{b}~{R},8~{a}~{R},10~{S},12~{a}~{S},14~{b}~{S})-10-[(2~{S},3~{S},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-2,4~{a},6~{a},6~{b},9,9,12~{a}-heptamethyl-13-oxidanylidene-3,4,5,6,6~{a},7,8,8~{a},10,11,12,14~{b}-dodecahydro-1~{H}-picen-2-yl]methyl]-3-(oxan-4-ylmethyl)urea, Bifunctional epoxide hydrolase 2, MAGNESIUM ION, ...
Authors:Wang, H, Feng, Y, Ge, Z.H.
Deposit date:2024-04-26
Release date:2024-12-11
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Discovery of glycosidated glycyrrhetinic acid derivatives: Natural product-based soluble epoxide hydrolase inhibitors.
Eur.J.Med.Chem., 280, 2024
8V1I
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BU of 8v1i by Molmil
Crystal structure of human mascRNA
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
Authors:Skeparnias, I, Zhang, J.
Deposit date:2023-11-20
Release date:2024-07-10
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis of MALAT1 RNA maturation and mascRNA biogenesis.
Nat.Struct.Mol.Biol., 31, 2024
8V1H
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BU of 8v1h by Molmil
Crystal structure of human pre-mascRNA
Descriptor: SODIUM ION, pre-mascRNA
Authors:Skeparnias, I, Zhang, J.
Deposit date:2023-11-20
Release date:2024-07-10
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Structural basis of MALAT1 RNA maturation and mascRNA biogenesis.
Nat.Struct.Mol.Biol., 31, 2024
8J17
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BU of 8j17 by Molmil
Crystal structure of IsPETase variant
Descriptor: Poly(ethylene terephthalate) hydrolase
Authors:Yin, Q.D, Wang, Y.X.
Deposit date:2023-04-12
Release date:2023-11-29
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Efficient polyethylene terephthalate biodegradation by an engineered Ideonella sakaiensis PETase with a fixed substrate-binding W156 residue
Green Chem, 2013
6WAE
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BU of 6wae by Molmil
Crystal Structure of 6X-His tagged SmcR
Descriptor: 1,2-ETHANEDIOL, LuxR family transcriptional regulator, SULFATE ION
Authors:Newman, J.D, Russell, M.M, Gonzalez-Gutierrez, G, van Kessel, J.C.
Deposit date:2020-03-25
Release date:2020-06-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:The DNA binding domain of the Vibrio vulnificus SmcR transcription factor is flexible and binds diverse DNA sequences.
Nucleic Acids Res., 49, 2021
6WAG
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BU of 6wag by Molmil
Crystal Structure of SmcR S76A from Vibrio Vulnificus
Descriptor: 1,2-ETHANEDIOL, LuxR family transcriptional regulator, SULFATE ION
Authors:Newman, J.D, Russell, M.M, Gonzalez-Gutierrez, G, van Kessel, J.C.
Deposit date:2020-03-25
Release date:2020-06-17
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.575 Å)
Cite:The DNA binding domain of the Vibrio vulnificus SmcR transcription factor is flexible and binds diverse DNA sequences.
Nucleic Acids Res., 49, 2021
6WAF
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BU of 6waf by Molmil
Crystal Structure of SmcR N55I from Vibrio vulnificus
Descriptor: LuxR family transcriptional regulator, SULFATE ION
Authors:Newman, J.D, Russell, M.M, Gonzalez-Gutierrez, G, van Kessel, J.C.
Deposit date:2020-03-25
Release date:2020-06-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.381 Å)
Cite:The DNA binding domain of the Vibrio vulnificus SmcR transcription factor is flexible and binds diverse DNA sequences.
Nucleic Acids Res., 49, 2021
6WAH
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BU of 6wah by Molmil
Crystal Structure of SmcR L139R from Vibrio vulnificus
Descriptor: 1,2-ETHANEDIOL, LuxR family transcriptional regulator, SULFATE ION
Authors:Newman, J.D, Russell, M.M, Gonzalez-Gutierrez, G, van Kessel, J.C.
Deposit date:2020-03-25
Release date:2020-06-17
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:The DNA binding domain of the Vibrio vulnificus SmcR transcription factor is flexible and binds diverse DNA sequences.
Nucleic Acids Res., 49, 2021
6WAI
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BU of 6wai by Molmil
Crystal Structure of SmcR N142D from Vibrio vulnificus
Descriptor: 1,2-ETHANEDIOL, LuxR family transcriptional regulator, SULFATE ION
Authors:Newman, J.D, Russell, M.M, Gonzalez-Gutierrez, G, van Kessel, J.C.
Deposit date:2020-03-25
Release date:2020-06-17
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.583 Å)
Cite:The DNA binding domain of the Vibrio vulnificus SmcR transcription factor is flexible and binds diverse DNA sequences.
Nucleic Acids Res., 49, 2021
6BOG
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BU of 6bog by Molmil
Crystal structure of RapA, a Swi2/Snf2 protein that recycles RNA polymerase during transcription
Descriptor: RNA polymerase-associated protein RapA, SULFATE ION
Authors:Shaw, G.X, Gan, J, Zhou, Y.N, Zhang, R, Joachimiak, A, Jin, D.J, Ji, X.
Deposit date:2017-11-20
Release date:2017-12-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.205 Å)
Cite:Structure of RapA, a Swi2/Snf2 protein that recycles RNA polymerase during transcription.
Structure, 16, 2008

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