Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6B4Z
DownloadVisualize
BU of 6b4z by Molmil
Schistosoma mansoni (Blood Fluke) Sulfotransferase, T157S Mutant
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE-3'-5'-DIPHOSPHATE, Sulfotransferase oxamniquine resistance protein
Authors:Taylor, A.B.
Deposit date:2017-09-27
Release date:2018-10-10
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Why does oxamniquine kill Schistosoma mansoni and not S. haematobium and S. japonicum?
Int.J.Parasitol., 2020
6CJ7
DownloadVisualize
BU of 6cj7 by Molmil
Crystal structure of Manduca sexta Serine protease inhibitor (Serpin)-12
Descriptor: Serpin-12
Authors:Gulati, M, Hu, Y, Peng, S, Pathak, P.K, Wang, Y, Deng, J, Jiang, H.
Deposit date:2018-02-26
Release date:2018-07-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Manduca sexta serpin-12 controls the prophenoloxidase activation system in larval hemolymph.
Insect Biochem. Mol. Biol., 99, 2018
7XJZ
DownloadVisualize
BU of 7xjz by Molmil
Cryo-EM strucrture of Oryza sativa plastid glycyl-tRNA synthetase in complex with tRNA (tRNA binding state)
Descriptor: Glycine--tRNA ligase, tRNA(gly)
Authors:Yu, Z, Wu, Z, Li, Y, Lu, G, Lin, J.
Deposit date:2022-04-19
Release date:2023-05-03
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural basis of a two-step tRNA recognition mechanism for plastid glycyl-tRNA synthetase.
Nucleic Acids Res., 51, 2023
7XJY
DownloadVisualize
BU of 7xjy by Molmil
Cryo-EM structure of Oryza sativa plastid glycyl-tRNA synthetase (apo form)
Descriptor: Glycine--tRNA ligase
Authors:Yu, Z, Wu, Z, Li, Y, Lu, G, Lin, J.
Deposit date:2022-04-19
Release date:2023-05-03
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural basis of a two-step tRNA recognition mechanism for plastid glycyl-tRNA synthetase.
Nucleic Acids Res., 51, 2023
7XK1
DownloadVisualize
BU of 7xk1 by Molmil
Cryo-EM structure of Oryza sativa plastid glycyl-tRNA synthetase in complex with two tRNAs (both in tRNA binding states)
Descriptor: Glycine--tRNA ligase, tRNA(gly)
Authors:Yu, Z, Wu, Z, Li, Y, Lu, G, Lin, J.
Deposit date:2022-04-19
Release date:2023-05-03
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structural basis of a two-step tRNA recognition mechanism for plastid glycyl-tRNA synthetase.
Nucleic Acids Res., 51, 2023
7XK0
DownloadVisualize
BU of 7xk0 by Molmil
Cryo-EM strucrture of Oryza sativa plastid glycyl-tRNA synthetase in complex with tRNA (tRNA locked state)
Descriptor: Glycine--tRNA ligase, tRNA(gly)
Authors:Yu, Z, Wu, Z, Li, Y, Lu, G, Lin, J.
Deposit date:2022-04-19
Release date:2023-05-03
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.59 Å)
Cite:Structural basis of a two-step tRNA recognition mechanism for plastid glycyl-tRNA synthetase.
Nucleic Acids Res., 51, 2023
2KCJ
DownloadVisualize
BU of 2kcj by Molmil
solution structure of FAPP1 PH domain
Descriptor: Pleckstrin homology domain-containing family A member 3
Authors:Lenoir, M, Coskun, U, James, J, Simons, K, Overduin, M.
Deposit date:2008-12-22
Release date:2009-12-22
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural basis of wedging the Golgi membrane by FAPP pleckstrin homology domains.
Embo Rep., 11, 2010
2NNX
DownloadVisualize
BU of 2nnx by Molmil
Crystal Structure of the H46R, H48Q double mutant of human [Cu-Zn] Superoxide Dismutase
Descriptor: SULFATE ION, SUPEROXIDE DISMUTASE [CU-ZN], ZINC ION
Authors:Schuermann, J.P, Hart, P.J.
Deposit date:2006-10-24
Release date:2006-11-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Disease-associated mutations at copper ligand histidine residues of superoxide dismutase 1 diminish the binding of copper and compromise dimer stability
J.Biol.Chem., 282, 2007
3R0Q
DownloadVisualize
BU of 3r0q by Molmil
A Uniquely Open Conformation Revealed in the Crystal Structure of Arabidopsis Thaliana Protein Arginine Methyltransferase 10
Descriptor: Probable protein arginine N-methyltransferase 4.2, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Cheng, Y, Redinbo, M.R.
Deposit date:2011-03-08
Release date:2011-10-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Crystal structure of the plant epigenetic protein arginine methyltransferase 10.
J.Mol.Biol., 414, 2011
5GNG
DownloadVisualize
BU of 5gng by Molmil
Crystal Structure of BioG from Haemophilus influenzae at 1.26 Angstroms resolution
Descriptor: Uncharacterized protein HI_1552
Authors:Shi, J, Guo, Z.
Deposit date:2016-07-20
Release date:2016-12-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:An Atypical alpha / beta-Hydrolase Fold Revealed in the Crystal Structure of Pimeloyl-Acyl Carrier Protein Methyl Esterase BioG from Haemophilus influenzae
Biochemistry, 55, 2016
5H3B
DownloadVisualize
BU of 5h3b by Molmil
Crystal Structure of SeMet-BioG from Haemophilus influenzae at 1.49 Angstroms resolution
Descriptor: GLYCEROL, ISOPROPYL ALCOHOL, Uncharacterized protein HI_1552
Authors:Shi, J, Guo, Z.
Deposit date:2016-10-21
Release date:2016-12-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.492 Å)
Cite:An Atypical alpha / beta-Hydrolase Fold Revealed in the Crystal Structure of Pimeloyl-Acyl Carrier Protein Methyl Esterase BioG from Haemophilus influenzae
Biochemistry, 55, 2016
8X6B
DownloadVisualize
BU of 8x6b by Molmil
Crystal structure of immune receptor PVRIG in complex with ligand Nectin-2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Nectin-2, Transmembrane protein PVRIG
Authors:Hu, S.T, Han, P, Wang, H, Qi, J.X.
Deposit date:2023-11-21
Release date:2024-04-24
Last modified:2024-07-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the immune recognition and selectivity of the immune receptor PVRIG for ligand Nectin-2.
Structure, 32, 2024
8H2X
DownloadVisualize
BU of 8h2x by Molmil
Structure of Acb2
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, p26
Authors:Feng, Y, Cao, X.L.
Deposit date:2022-10-07
Release date:2023-02-22
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Bacteriophages inhibit and evade cGAS-like immune function in bacteria.
Cell, 186, 2023
8H39
DownloadVisualize
BU of 8h39 by Molmil
Structure of Acb2 complexed with c-di-AMP
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, 1,2-ETHANEDIOL, p26
Authors:Feng, Y, Cao, X.L.
Deposit date:2022-10-08
Release date:2023-02-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Bacteriophages inhibit and evade cGAS-like immune function in bacteria.
Cell, 186, 2023
8H2J
DownloadVisualize
BU of 8h2j by Molmil
Structure of Acb2 complexed with 3',3'-cGAMP
Descriptor: 2-amino-9-[(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-9-(6-amino-9H-purin-9-yl)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecin-2-yl]-1,9-dihydro-6H-purin-6-one, p26
Authors:Feng, Y, Cao, X.L.
Deposit date:2022-10-06
Release date:2023-02-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Bacteriophages inhibit and evade cGAS-like immune function in bacteria.
Cell, 186, 2023
6IP0
DownloadVisualize
BU of 6ip0 by Molmil
Crystal structure of Arabidopsis thaliana JMJ13 catalytic domain in complex with AKG
Descriptor: 2-OXOGLUTARIC ACID, NICKEL (II) ION, SULFATE ION, ...
Authors:Hu, H, Du, J.
Deposit date:2018-11-01
Release date:2019-04-10
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Arabidopsis H3K27me3 demethylase JUMONJI 13 is a temperature and photoperiod dependent flowering repressor.
Nat Commun, 10, 2019
6IP4
DownloadVisualize
BU of 6ip4 by Molmil
Crystal structure of Arabidopsis thaliana JMJ13 catalytic domain in complex with NOG and an H3K27me3 peptide
Descriptor: Arabidopsis JMJ13, Histone H3.2, N-OXALYLGLYCINE, ...
Authors:Hu, H, Du, J.
Deposit date:2018-11-02
Release date:2019-04-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Arabidopsis H3K27me3 demethylase JUMONJI 13 is a temperature and photoperiod dependent flowering repressor.
Nat Commun, 10, 2019
6KYF
DownloadVisualize
BU of 6kyf by Molmil
Crystal structure of an anti-CRISPR protein
Descriptor: AcrF11, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Niu, Y, Wang, H, Zhang, Y, Feng, Y.
Deposit date:2019-09-18
Release date:2020-09-23
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.07 Å)
Cite:A Type I-F Anti-CRISPR Protein Inhibits the CRISPR-Cas Surveillance Complex by ADP-Ribosylation.
Mol.Cell, 80, 2020
8G05
DownloadVisualize
BU of 8g05 by Molmil
Cryo-EM structure of an orphan GPCR-Gi protein signaling complex
Descriptor: 6-(octylamino)pyrimidine-2,4(3H,5H)-dione, CHOLESTEROL, G-protein coupled receptor 84, ...
Authors:Zhang, X, Wang, Y.J, Li, X, Liu, G.B, Gong, W.M, Zhang, C.
Deposit date:2023-01-31
Release date:2023-11-01
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Pro-phagocytic function and structural basis of GPR84 signaling.
Nat Commun, 14, 2023
6KXG
DownloadVisualize
BU of 6kxg by Molmil
Crystal structure of caspase-11-CARD
Descriptor: caspase-11-CARD
Authors:Liu, M.Z.Y, Jin, T.C.
Deposit date:2019-09-11
Release date:2020-09-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.805 Å)
Cite:Crystal structure of caspase-11 CARD provides insights into caspase-11 activation.
Cell Discov, 6, 2020
5YKO
DownloadVisualize
BU of 5yko by Molmil
Crystal structure of Arabidopsis thaliana JMJ14 catalytic domain in complex with NOG and H3K4me3 peptide
Descriptor: H3(1-10)K4me3 peptide, N-OXALYLGLYCINE, NICKEL (II) ION, ...
Authors:Yang, Z, Du, J.
Deposit date:2017-10-15
Release date:2017-12-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of the Arabidopsis JMJ14-H3K4me3 Complex Provides Insight into the Substrate Specificity of KDM5 Subfamily Histone Demethylases.
Plant Cell, 30, 2018
7E4I
DownloadVisualize
BU of 7e4i by Molmil
Cryo-EM structure of the yeast mitochondrial SAM-Tom40/Tom5/Tom6 complex at 3.0 angstrom
Descriptor: Mitochondrial import receptor subunit TOM40, Mitochondrial import receptor subunit TOM5, Mitochondrial import receptor subunit TOM6, ...
Authors:Wang, Q, Guan, Z.Y, Qi, L.B, Yan, C.Y, Yin, P.
Deposit date:2021-02-13
Release date:2021-09-01
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Structural insight into the SAM-mediated assembly of the mitochondrial TOM core complex.
Science, 373, 2021
7E4H
DownloadVisualize
BU of 7e4h by Molmil
Cryo-EM structure of the yeast mitochondrial SAM-Tom40 complex at 3.0 angstrom
Descriptor: Mitochondrial import receptor subunit TOM40, Sorting assembly machinery 35 kDa subunit, Sorting assembly machinery 37 kDa subunit, ...
Authors:Wang, Q, Guan, Z.Y, Qi, L.B, Yan, C.Y, Yin, P.
Deposit date:2021-02-13
Release date:2021-09-01
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.01 Å)
Cite:Structural insight into the SAM-mediated assembly of the mitochondrial TOM core complex.
Science, 373, 2021
5YKN
DownloadVisualize
BU of 5ykn by Molmil
crystal structure of Arabidopsis thaliana JMJ14 catalytic domain
Descriptor: NICKEL (II) ION, Probable lysine-specific demethylase JMJ14, ZINC ION
Authors:Yang, Z, Du, J.
Deposit date:2017-10-15
Release date:2017-12-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the Arabidopsis JMJ14-H3K4me3 Complex Provides Insight into the Substrate Specificity of KDM5 Subfamily Histone Demethylases.
Plant Cell, 30, 2018
6JNL
DownloadVisualize
BU of 6jnl by Molmil
REF6 ZnF2-4-NAC004 complex
Descriptor: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, DNA (5'-D(*CP*AP*AP*AP*AP*CP*AP*GP*AP*GP*A)-3'), DNA (5'-D(*TP*TP*CP*TP*CP*TP*GP*TP*TP*TP*TP*G)-3'), ...
Authors:Yao, Q.Q, Wu, B.X, Ma, J.B.
Deposit date:2019-03-17
Release date:2019-03-27
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:DNA methylation repels targeting of Arabidopsis REF6.
Nat Commun, 10, 2019

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon