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Crystal structure of putative phosphosugar isomerase involved in capsule formation (YP_209877.1) from Bacteroides fragilis NCTC 9343 at 1.70 A resolution
Descriptor:	1,2-ETHANEDIOL, CYTIDINE 5'-MONOPHOSPHATE 3-DEOXY-BETA-D-GULO-OCT-2-ULO-PYRANOSONIC ACID, putative phosphosugar isomerase involved in capsule formation
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2008-10-08
Release date:	2008-10-21
Last modified:	2023-02-01
Method:	X-RAY DIFFRACTION (1.7 Å)
Cite:	Structural analysis of arabinose-5-phosphate isomerase from Bacteroides fragilis and functional implications. Acta Crystallogr.,Sect.D, 70, 2014

3OZ2

Crystal structure of a geranylgeranyl bacteriochlorophyll reductase-like (Ta0516) from Thermoplasma acidophilum at 1.60 A resolution
Descriptor:	(2R)-3-{[(R)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-2-[(6Z)-tridec-6-enoyloxy]propyl (9Z)-octadec-9-enoate, 1,2-ETHANEDIOL, Digeranylgeranylglycerophospholipid reductase, ...
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2010-09-24
Release date:	2010-10-27
Last modified:	2023-02-01
Method:	X-RAY DIFFRACTION (1.6 Å)
Cite:	Insights into substrate specificity of geranylgeranyl reductases revealed by the structure of digeranylgeranylglycerophospholipid reductase, an essential enzyme in the biosynthesis of archaeal membrane lipids. J.Mol.Biol., 404, 2010

3RIZ

Crystal structure of the plant steroid receptor BRI1 ectodomain
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Protein BRASSINOSTEROID INSENSITIVE 1, ...
Authors:	Hothorn, M.
Deposit date:	2011-04-14
Release date:	2011-06-22
Last modified:	2020-07-29
Method:	X-RAY DIFFRACTION (2.523 Å)
Cite:	Structural basis of steroid hormone perception by the receptor kinase BRI1. Nature, 474, 2011

8DT8

LM18/Nb136 bispecific tetra-nanobody immunoglobulin in complex with SARS-CoV-2-6P-Mut7 S protein (focused refinement)
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, LM18 nanobody, Nb136 nanobody, ...
Authors:	Ozorowski, G, Turner, H.L, Ward, A.B.
Deposit date:	2022-07-25
Release date:	2023-06-14
Method:	ELECTRON MICROSCOPY (3.34 Å)
Cite:	Fully synthetic platform to rapidly generate tetravalent bispecific nanobody-based immunoglobulins. Proc.Natl.Acad.Sci.USA, 120, 2023

8DYT

Cryo-EM structure of 227 Fab in complex with (NPNA)8 peptide
Descriptor:	227 Fab heavy chain, 227 Fab light chain, Circumsporozoite protein
Authors:	Martin, G.M, Ward, A.B.
Deposit date:	2022-08-05
Release date:	2023-08-02
Last modified:	2024-04-24
Method:	ELECTRON MICROSCOPY (3.3 Å)
Cite:	Affinity-matured homotypic interactions induce spectrum of PfCSP structures that influence protection from malaria infection. Nat Commun, 14, 2023

8DYW

Cryo-EM structure of 239 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein (rsCSP)
Descriptor:	239 Fab heavy chain, 239 Fab light chain, Circumsporozoite protein
Authors:	Martin, G.M, Ward, A.B.
Deposit date:	2022-08-05
Release date:	2023-08-02
Last modified:	2024-04-24
Method:	ELECTRON MICROSCOPY (3.72 Å)
Cite:	Affinity-matured homotypic interactions induce spectrum of PfCSP structures that influence protection from malaria infection. Nat Commun, 14, 2023

8DYY

Cryo-EM structure of 334 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein (rsCSP)
Descriptor:	334 Fab heavy chain, 334 Fab light chain, Circumsporozoite protein
Authors:	Martin, G.M, Ward, A.B.
Deposit date:	2022-08-05
Release date:	2023-08-02
Last modified:	2024-04-24
Method:	ELECTRON MICROSCOPY (3.62 Å)
Cite:	Affinity-matured homotypic interactions induce spectrum of PfCSP structures that influence protection from malaria infection. Nat Commun, 14, 2023

8DZ3

Cryo-EM structure of 337 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein (rsCSP)
Descriptor:	337 Fab heavy chain, 337 Fab light chain, Circumsporozoite protein
Authors:	Martin, G.M, Ward, A.B.
Deposit date:	2022-08-06
Release date:	2023-08-02
Last modified:	2024-04-24
Method:	ELECTRON MICROSCOPY (2.7 Å)
Cite:	Affinity-matured homotypic interactions induce spectrum of PfCSP structures that influence protection from malaria infection. Nat Commun, 14, 2023

8DZ5

Cryo-EM structure of 364 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein (rsCSP)
Descriptor:	364 Fab heavy chain, 364 Fab light chain, Circumsporozoite protein
Authors:	Martin, G.M, Ward, A.B.
Deposit date:	2022-08-06
Release date:	2023-08-02
Last modified:	2024-04-24
Method:	ELECTRON MICROSCOPY (3.84 Å)
Cite:	Affinity-matured homotypic interactions induce spectrum of PfCSP structures that influence protection from malaria infection. Nat Commun, 14, 2023

8DYX

Cryo-EM structure of 311 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein (rsCSP)
Descriptor:	311 heavy chain, 311 light chain, Circumsporozoite protein
Authors:	Martin, G.M, Ward, A.B.
Deposit date:	2022-08-05
Release date:	2023-08-02
Last modified:	2024-04-24
Method:	ELECTRON MICROSCOPY (3 Å)
Cite:	Affinity-matured homotypic interactions induce spectrum of PfCSP structures that influence protection from malaria infection. Nat Commun, 14, 2023

8DZ4

Cryo-EM structure of 356 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein (rsCSP)
Descriptor:	356 Fab heavy chain, 356 Fab light chain, Circumsporozoite protein
Authors:	Martin, G.M, Ward, A.B.
Deposit date:	2022-08-06
Release date:	2023-08-02
Last modified:	2024-04-24
Method:	ELECTRON MICROSCOPY (3.2 Å)
Cite:	Affinity-matured homotypic interactions induce spectrum of PfCSP structures that influence protection from malaria infection. Nat Commun, 14, 2023

8E6K

2H08 Fab in complex with influenza virus neuraminidase from A/Brevig Mission/1/1918 (H1N1)
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2H08 fragment antigen binding heavy chain, 2H08 fragment antigen binding light chain, ...
Authors:	Turner, H.L, Ozorowski, G, Ward, A.B.
Deposit date:	2022-08-22
Release date:	2023-08-09
Last modified:	2023-08-23
Method:	ELECTRON MICROSCOPY (3.1 Å)
Cite:	Human anti-N1 monoclonal antibodies elicited by pandemic H1N1 virus infection broadly inhibit HxN1 viruses in vitro and in vivo. Immunity, 56, 2023

8E6J

3H03 Fab in complex with influenza virus neuraminidase from A/Brevig Mission/1/1918 (H1N1)
Descriptor:	3H03 fragment antigen binding heavy chain, 3H03 fragment antigen binding light chain, Neuraminidase
Authors:	Turner, H.L, Ozorowski, G, Ward, A.B.
Deposit date:	2022-08-22
Release date:	2023-08-09
Last modified:	2023-08-23
Method:	ELECTRON MICROSCOPY (2.7 Å)
Cite:	Human anti-N1 monoclonal antibodies elicited by pandemic H1N1 virus infection broadly inhibit HxN1 viruses in vitro and in vivo. Immunity, 56, 2023

1WCJ

Conserved Hypothetical Protein TM0487 from Thermotoga maritima
Descriptor:	HYPOTHETICAL PROTEIN TM0487
Authors:	Almeida, M.S, Peti, W, Herrmann, T, Wuthrich, K, Joint Center for Structural Genomics (JCSG)
Deposit date:	2004-11-17
Release date:	2004-12-14
Last modified:	2024-05-15
Method:	SOLUTION NMR
Cite:	NMR Structure of the Conserved Hypothetical Protein Tm0487 from Thermotoga Maritima: Implications for 216 Homologous Duf59 Proteins. Protein Sci., 14, 2005

4J1U

Crystal structure of antibody 93F3 unstable variant
Descriptor:	antibody 93F3 Heavy chain, antibody 93F3 Light chain
Authors:	Wang, F.
Deposit date:	2013-02-02
Release date:	2013-03-13
Last modified:	2013-05-22
Method:	X-RAY DIFFRACTION (2.58 Å)
Cite:	Somatic hypermutation maintains antibody thermodynamic stability during affinity maturation. Proc.Natl.Acad.Sci.USA, 110, 2013

8EQN

BG505 UFO-E2p-L4P nanoparticle reconstructed by focused refinement with a mask around the nanoparticle core
Descriptor:	BG505 UFO-E2p-L4P
Authors:	Antanasijevic, A, Zhang, Y.N, Zhu, J, Ward, A.B.
Deposit date:	2022-10-08
Release date:	2023-04-19
Last modified:	2024-06-19
Method:	ELECTRON MICROSCOPY (3.7 Å)
Cite:	Single-component multilayered self-assembling protein nanoparticles presenting glycan-trimmed uncleaved prefusion optimized envelope trimmers as HIV-1 vaccine candidates. Nat Commun, 14, 2023

1VK8

CRYSTAL STRUCTURE OF A PUTATIVE THIAMINE BIOSYNTHESIS/SALVAGE PROTEIN (TM0486) FROM THERMOTOGA MARITIMA AT 1.80 A RESOLUTION
Descriptor:	UNKNOWN LIGAND, hypothetical protein TM0486
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2004-05-05
Release date:	2004-05-18
Last modified:	2023-01-25
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	TM0486 from the hyperthermophilic anaerobe Thermotoga maritima is a thiamin-binding protein involved in response of the cell to oxidative conditions. J.Mol.Biol., 400, 2010

1VLR

Crystal structure of mRNA decapping enzyme (DcpS) from Mus musculus at 1.83 A resolution
Descriptor:	1,2-ETHANEDIOL, mRNA decapping enzyme
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2004-08-10
Release date:	2004-08-24
Last modified:	2023-09-20
Method:	X-RAY DIFFRACTION (1.83 Å)
Cite:	Crystal structure of an Apo mRNA decapping enzyme (DcpS) from Mouse at 1.83 A resolution. Proteins, 60, 2005

1VQ3

Crystal structure of Phosphoribosylformylglycinamidine synthase, purS subunit (EC 6.3.5.3) (TM1244) from Thermotoga maritima at 1.90 A resolution
Descriptor:	Phosphoribosylformylglycinamidine synthase, purS subunit
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2004-12-15
Release date:	2004-12-28
Last modified:	2023-09-20
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	Crystal structure of phosphoribosylformyl-glycinamidine synthase II, PurS subunit (TM1244) from Thermotoga maritima at 1.90 A resolution. Proteins, 65, 2006

4K4K

Crystal structure of a putative cell adhesion protein (BACUNI_00621) from Bacteroides uniformis ATCC 8492 at 1.67 A resolution
Descriptor:	CHLORIDE ION, Putative cell adhesion protein
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2013-04-12
Release date:	2013-05-01
Last modified:	2023-02-01
Method:	X-RAY DIFFRACTION (1.67 Å)
Cite:	A Distinct Type of Pilus from the Human Microbiome. Cell, 165, 2016

1VKM

Crystal structure of an indigoidine synthase a (idga)-like protein (tm1464) from thermotoga maritima msb8 at 1.90 A resolution
Descriptor:	1,2-ETHANEDIOL, MANGANESE (II) ION, UNKNOWN LIGAND, ...
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2004-06-09
Release date:	2004-06-29
Last modified:	2023-01-25
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	Crystal structure of an indigoidine synthase A (IndA)-like protein (TM1464) from Thermotoga maritima at 1.90 A resolution reveals a new fold. Proteins, 59, 2005

1VJ1

Crystal structure of putative NADPH-dependent oxidoreductase from Mus musculus at 2.10 A resolution
Descriptor:	putative NADPH-dependent oxidoreductase
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2003-12-03
Release date:	2003-12-09
Last modified:	2023-01-25
Method:	X-RAY DIFFRACTION (2.1 Å)
Cite:	Crystal structure of a putative NADPH-dependent oxidoreductase (GI: 18204011) from mouse at 2.10 A resolution Proteins, 56, 2004

1VJO

Crystal structure of Alanine--glyoxylate aminotransferase (ALR1004) from Nostoc sp. at 1.70 A resolution
Descriptor:	PYRIDOXAL-5'-PHOSPHATE, alanine--glyoxylate aminotransferase
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2004-03-16
Release date:	2004-03-23
Last modified:	2023-01-25
Method:	X-RAY DIFFRACTION (1.7 Å)
Cite:	Crystal structure of an alanine-glyoxylate aminotransferase from Anabaena sp. at 1.70 A resolution reveals a noncovalently linked PLP cofactor Proteins, 58, 2005

1VR3

Crystal structure of Acireductone dioxygenase (13543033) from Mus musculus at 2.06 A resolution
Descriptor:	Acireductone dioxygenase, ISOPROPYL ALCOHOL, NICKEL (II) ION, ...
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2005-01-28
Release date:	2005-02-15
Last modified:	2023-01-25
Method:	X-RAY DIFFRACTION (2.06 Å)
Cite:	Crystal structure of acireductone dioxygenase (ARD) from Mus musculus at 2.06 angstrom resolution. Proteins, 64, 2006

1VRM

Crystal structure of the apbe protein (tm1553) from thermotoga maritima msb8 at 1.58 A resolution
Descriptor:	(4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, UNKNOWN LIGAND, ...
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2005-03-10
Release date:	2005-03-22
Last modified:	2023-01-25
Method:	X-RAY DIFFRACTION (1.58 Å)
Cite:	Crystal structure of the ApbE protein (TM1553) from Thermotoga maritima at 1.58 A resolution. Proteins, 64, 2006

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