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6ASY
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BU of 6asy by Molmil
BiP-ATP2
Descriptor: 78 kDa glucose-regulated protein, ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, ...
Authors:Liu, Q, Yang, J, Zong, Y, Columbus, L, Zhou, L.
Deposit date:2017-08-26
Release date:2017-12-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Conformation transitions of the polypeptide-binding pocket support an active substrate release from Hsp70s.
Nat Commun, 8, 2017
7A0E
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BU of 7a0e by Molmil
The Crystal Structure of Bovine Thrombin in complex with Hirudin (C6U/C14U) at 1.9 Angstroms Resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hirudin variant-1, Prothrombin, ...
Authors:Hidmi, T, Mousa, R, Pomyalov, S, Lansky, S, Khouri, L, Metanis, N, Shoham, G.
Deposit date:2020-08-07
Release date:2021-03-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Diselenide crosslinks for enhanced and simplified oxidative protein folding
Commun Chem, 4, 2021
7A0D
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BU of 7a0d by Molmil
The Crystal Structure of Bovine Thrombin in complex with Hirudin (C16U/C28U) at 1.6 Angstroms Resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hirudin variant-1, Prothrombin, ...
Authors:Hidmi, T, Mousa, R, Pomyalov, S, Lansky, S, Khouri, L, Metanis, N, Shoham, G.
Deposit date:2020-08-07
Release date:2021-03-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Diselenide crosslinks for enhanced and simplified oxidative protein folding
Commun Chem, 4, 2021
7A0F
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BU of 7a0f by Molmil
The Crystal Structure of Bovine Thrombin in complex with Hirudin (C22U/C39U) at 2.7 Angstroms Resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hirudin variant-1, Prothrombin, ...
Authors:Hidmi, T, Mousa, R, Pomyalov, S, Lansky, S, Khouri, L, Metanis, N, Shoham, G.
Deposit date:2020-08-07
Release date:2021-03-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Diselenide crosslinks for enhanced and simplified oxidative protein folding
Commun Chem, 4, 2021
5W96
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BU of 5w96 by Molmil
Solution structure of phage derived peptide inhibitor of frizzled 7 receptor
Descriptor: Fz7 binding peptide
Authors:Nile, A.H, de Sousa e Melo, F, Mukund, S, Piskol, R, Hansen, S, Zhou, L, Zhang, Y, Fu, Y, Gogol, E.B, Komuves, L.G, Modrusan, Z, Angers, S, Franke, Y, Koth, C, Fairbrother, W.J, Wang, W, de Sauvage, F.J, Hannoush, R.N.
Deposit date:2017-06-22
Release date:2018-04-18
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:A selective peptide inhibitor of Frizzled 7 receptors disrupts intestinal stem cells.
Nat. Chem. Biol., 14, 2018
5Y2Q
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BU of 5y2q by Molmil
X-ray structure of acetylcholine binding protein (AChBP) complexed with a small molecule
Descriptor: 3-[[4-[(3,4-dichlorophenyl)methyl]piperidin-4-yl]methoxy]pyridine, Acetylcholine-binding protein
Authors:Jiang, L.L, Zhou, L.
Deposit date:2017-07-26
Release date:2018-08-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.363 Å)
Cite:X-ray structure of acetylcholine binding protein (AChBP) complexed with a small molecule
To Be Published
5Y35
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BU of 5y35 by Molmil
Phosphoglycerate mutase 1 complexed with a small molecule inhibitor KH1
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, Phosphoglycerate mutase 1, ...
Authors:Jiang, L.L, Zhou, L.
Deposit date:2017-07-27
Release date:2018-08-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.994 Å)
Cite:Phosphoglycerate mutase 1 complexed with a small molecule inhibitor KH1
To Be Published
5Y65
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BU of 5y65 by Molmil
Phosphoglycerate mutase 1 complexed with a small molecule inhibitor KH2
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, Phosphoglycerate mutase 1, ...
Authors:Jiang, L.L, Zhou, L.
Deposit date:2017-08-10
Release date:2018-12-05
Method:X-RAY DIFFRACTION (2.554 Å)
Cite:Phosphoglycerate mutase 1 complexed with a small molecule inhibitor KH2
To Be Published
4JN4
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BU of 4jn4 by Molmil
Allosteric opening of the polypeptide-binding site when an Hsp70 binds ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Chaperone protein DnaK, GLYCEROL, ...
Authors:Qi, R, Sarbeng, E.B, Liu, Q, Le, K.Q, Xu, X, Xu, H, Yang, J, Wong, J.L, Vorvis, C, Hendrickson, W.A, Zhou, L, Liu, Q.
Deposit date:2013-03-14
Release date:2013-05-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Allosteric opening of the polypeptide-binding site when an Hsp70 binds ATP.
Nat.Struct.Mol.Biol., 20, 2013
8GYM
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BU of 8gym by Molmil
Cryo-EM structure of Tetrahymena thermophila respiratory mega-complex MC IV2+(I+III2+II)2
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DILAUROYL-SN-GLYCERO-3-PHOSPHATE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, ...
Authors:Wu, M.C, Hu, Y.Q, Han, F.Z, Zhou, L.
Deposit date:2022-09-23
Release date:2023-06-14
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:Structures of Tetrahymena thermophila respiratory megacomplexes on the tubular mitochondrial cristae.
Nat Commun, 14, 2023
8GZU
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BU of 8gzu by Molmil
Cryo-EM structure of Tetrahymena thermophila respiratory Megacomplex MC (IV2+I+III2+II)2
Descriptor: 2 iron, 2 sulfur cluster-binding protein, 2-oxoglutarate/malate carrier protein, ...
Authors:Wu, M.C, Hu, Y.Q, Han, F.Z, Zhou, L.
Deposit date:2022-09-27
Release date:2023-06-14
Method:ELECTRON MICROSCOPY (4.18 Å)
Cite:Structures of Tetrahymena thermophila respiratory megacomplexes on the tubular mitochondrial cristae.
Nat Commun, 14, 2023
4JNE
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BU of 4jne by Molmil
Allosteric opening of the polypeptide-binding site when an Hsp70 binds ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, Hsp70 CHAPERONE DnaK, ...
Authors:Qi, R, Sarbeng, E.B, Liu, Q, Le, K.Q, Xu, X, Xu, H, Yang, J, Wong, J.L, Vorvis, C, Hendrickson, W.A, Zhou, L, Liu, Q.
Deposit date:2013-03-15
Release date:2013-05-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Allosteric opening of the polypeptide-binding site when an Hsp70 binds ATP.
Nat.Struct.Mol.Biol., 20, 2013
4JNF
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BU of 4jnf by Molmil
Allosteric opening of the polypeptide-binding site when an Hsp70 binds ATP
Descriptor: Hsp70 CHAPERONE DnaK
Authors:Qi, R, Sarbeng, E.B, Liu, Q, Le, K.Q, Xu, X, Xu, H, Yang, J, Wong, J.L, Vorvis, C, Hendrickson, W.A, Zhou, L, Liu, Q.
Deposit date:2013-03-15
Release date:2013-05-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.621 Å)
Cite:Allosteric opening of the polypeptide-binding site when an Hsp70 binds ATP.
Nat.Struct.Mol.Biol., 20, 2013
5ZRM
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BU of 5zrm by Molmil
Phosphoglycerate mutase 1 complexed with a small molecule inhibitor In-AC
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-[(3,4-dihydroxy-9,10-dioxo-9,10-dihydroanthracen-2-yl)sulfamoyl]phenyl acetate, CHLORIDE ION, ...
Authors:Jiang, L.L, Zhou, L.
Deposit date:2018-04-24
Release date:2019-05-01
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Phosphoglycerate mutase 1 complexed with a small molecule inhibitor In-AC
To Be Published
5ZS7
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BU of 5zs7 by Molmil
Acetylation of lysine 100 in Phosphoglycerate mutase 1
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, Phosphoglycerate mutase 1
Authors:Jiang, L.L, Zhou, L.
Deposit date:2018-04-28
Release date:2019-05-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Acetylation of lysine 100 in Phosphoglycerate mutase 1
To Be Published
5ZS8
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BU of 5zs8 by Molmil
Acetylation of lysine 100 of Phosphoglycerate mutase 1 complexed with KH_ol
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, N-(3,4-dihydroxy-9,10-dioxo-9,10-dihydroanthracen-2-yl)-2-hydroxybenzene-1-sulfonamide, ...
Authors:Jiang, L.L, Zhou, L.
Deposit date:2018-04-28
Release date:2019-05-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Acetylation of lysine 100 of Phosphoglycerate mutase 1 complexed with KH_ol
To Be Published
8FEQ
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BU of 8feq by Molmil
16mer self-complementary duplex RNA with two separated s(2)U:s(2)U pairs
Descriptor: CALCIUM ION, RNA 16mer with two separated s(2)U
Authors:Fang, Z, Zhou, L, Szostak, J.W.
Deposit date:2022-12-06
Release date:2024-01-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Unusual Base Pair between Two 2-Thiouridines and Its Implication for Nonenzymatic RNA Copying.
J.Am.Chem.Soc., 146, 2024
8FER
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BU of 8fer by Molmil
16mer self-complementary duplex RNA with two continuous s(2)U:s(2)U pairs
Descriptor: RNA 16mer with two continuous s(2)U
Authors:Fang, Z, Zhou, L, Szostak, J.W.
Deposit date:2022-12-06
Release date:2024-01-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Unusual Base Pair between Two 2-Thiouridines and Its Implication for Nonenzymatic RNA Copying.
J.Am.Chem.Soc., 146, 2024
8IKU
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BU of 8iku by Molmil
Aldo-keto reductase KmAKR - W297H
Descriptor: NADPH-dependent alpha-keto amide reductase
Authors:Xu, S.Y, Zhou, L, Xu, Y, Wang, Y.J, Zheng, Y.G.
Deposit date:2023-03-01
Release date:2024-03-06
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Aldo-keto reductase KmAKR - W297H from Kluyveromyces marxianus
To Be Published
8J0I
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BU of 8j0i by Molmil
Aldo-keto reductase KmAKR
Descriptor: NADPH-dependent alpha-keto amide reductase, SODIUM ION
Authors:Xu, S.Y, Zhou, L, Xu, Y, Wang, Y.J, Zheng, Y.G.
Deposit date:2023-04-11
Release date:2024-04-17
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Aldo-keto reductase KmAKR from Kluyveromyces marxianus
To Be Published
8IJR
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BU of 8ijr by Molmil
The cryo-EM structure of human sphingomyelin synthase-related protein in complex with diacylglycerol/phosphoethanolamine
Descriptor: (2S)-1-(hexadecanoyloxy)-3-hydroxypropan-2-yl (11Z)-octadec-11-enoate, PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER, Sphingomyelin synthase-related protein 1
Authors:Hu, K, Zhang, Q, Chen, Y, Yao, D, Zhou, L, Cao, Y.
Deposit date:2023-02-28
Release date:2024-02-28
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:Cryo-EM structure of human sphingomyelin synthase and its mechanistic implications for sphingomyelin synthesis.
Nat.Struct.Mol.Biol., 31, 2024
8IJQ
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BU of 8ijq by Molmil
The cryo-EM structure of human sphingomyelin synthase-related protein in complex with ceramide
Descriptor: N-((E,2S,3R)-1,3-DIHYDROXYOCTADEC-4-EN-2-YL)PALMITAMIDE, Sphingomyelin synthase-related protein 1
Authors:Hu, K, Zhang, Q, Chen, Y, Yao, D, Zhou, L, Cao, Y.
Deposit date:2023-02-27
Release date:2024-02-28
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:Cryo-EM structure of human sphingomyelin synthase and its mechanistic implications for sphingomyelin synthesis.
Nat.Struct.Mol.Biol., 31, 2024
3LRB
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BU of 3lrb by Molmil
Structure of E. coli AdiC
Descriptor: Arginine/agmatine antiporter
Authors:Gao, X, Lu, F, Zhou, L, Shi, Y.
Deposit date:2010-02-10
Release date:2010-02-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.61 Å)
Cite:Structure and mechanism of an amino acid antiporter
Science, 324, 2009
3LRC
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BU of 3lrc by Molmil
Structure of E. coli AdiC (P1)
Descriptor: Arginine/agmatine antiporter
Authors:Gao, X, Lu, F, Zhou, L, Shi, Y.
Deposit date:2010-02-11
Release date:2010-02-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (4.004 Å)
Cite:Structure and mechanism of an amino acid antiporter
Science, 324, 2009
3L1L
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BU of 3l1l by Molmil
Structure of Arg-bound Escherichia coli AdiC
Descriptor: ARGININE, Arginine/agmatine antiporter, nonyl beta-D-glucopyranoside
Authors:Gao, X, Zhou, L, Shi, Y.
Deposit date:2009-12-13
Release date:2010-02-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.002 Å)
Cite:Mechanism of substrate recognition and transport by an amino acid antiporter
Nature, 463, 2010

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PDB entries from 2024-08-28

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