Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6DZQ
DownloadVisualize
BU of 6dzq by Molmil
The N-terminal domain of PA endonuclease from the influenza H1N1 virus in complex with 3-hydroxy-6-methyl-4-oxo-4H-pyran-2-carboxylic acid
Descriptor: 1,2-ETHANEDIOL, 3-hydroxy-6-methyl-4-oxo-4H-pyran-2-carboxylic acid, MANGANESE (II) ION, ...
Authors:Dick, B.L, Morrison, C.N, Cohen, S.M.
Deposit date:2018-07-05
Release date:2018-11-07
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure-Activity Relationships in Metal-Binding Pharmacophores for Influenza Endonuclease.
J. Med. Chem., 61, 2018
6GK8
DownloadVisualize
BU of 6gk8 by Molmil
Crystal structure of anti-tau antibody dmCBTAU-28.1, double mutant (S32R, E35K) of CBTAU-28.1, in complex with Tau peptide A7731 (residues 52-71)
Descriptor: CHLORIDE ION, HUMAN FAB ANTIBODY FRAGMENT OF CBTAU-28.1(S32R;E35K), TAU PEPTIDE A7731 (RESIDUES 52-71)
Authors:Steinbacher, S, Mrosek, M, Juraszek, J.
Deposit date:2018-05-18
Release date:2018-06-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:A common antigenic motif recognized by naturally occurring human VH5-51/VL4-1 anti-tau antibodies with distinct functionalities.
Acta Neuropathol Commun, 6, 2018
6GK7
DownloadVisualize
BU of 6gk7 by Molmil
Crystal structure of anti-tau antibody dmCBTAU-27.1, double mutant (S31Y, T100I) of CBTAU-27.1, in complex with Tau peptide A8119B (residues 299-318)
Descriptor: CHLORIDE ION, HUMAN FAB ANTIBODY FRAGMENT OF CBTAU-27.1(S31Y,T100I), HUMAN TAU PEPTIDE A8119 RESIDUES 299-318
Authors:Steinbacher, S, Mrosek, M, Juraszek, J.
Deposit date:2018-05-18
Release date:2018-06-13
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:A common antigenic motif recognized by naturally occurring human VH5-51/VL4-1 anti-tau antibodies with distinct functionalities.
Acta Neuropathol Commun, 6, 2018
4YDN
DownloadVisualize
BU of 4ydn by Molmil
High resolution crystal structure of human transthyretin bound to ligand and conjugates of 4-(5-(3,5-dichloro-4-hydroxyphenyl)-1,3,4-oxadiazol-2-yl)phenyl fluorosulfate
Descriptor: 2,6-dichloro-4-[5-(4-hydroxyphenyl)-1,3,4-oxadiazol-2-yl]phenol, 4-[5-(3,5-dichloro-4-hydroxyphenyl)-1,3,4-oxadiazol-2-yl]phenyl sulfurofluoridate, Transthyretin
Authors:Connelly, S, Bradbury, N.C.
Deposit date:2015-02-22
Release date:2015-07-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:A Fluorogenic Aryl Fluorosulfate for Intraorganellar Transthyretin Imaging in Living Cells and in Caenorhabditis elegans.
J.Am.Chem.Soc., 137, 2015
4YDM
DownloadVisualize
BU of 4ydm by Molmil
High resolution crystal structure of human transthyretin bound to ligand and conjugates of 3-(5-(3,5-dichloro-4-hydroxyphenyl)-1,3,4-oxadiazol-2-yl)phenyl fluorosulfate
Descriptor: 2,6-dichloro-4-[5-(3-hydroxyphenyl)-1,3,4-oxadiazol-2-yl]phenol, Transthyretin
Authors:Connelly, S, Bradbury, N.C.
Deposit date:2015-02-22
Release date:2015-07-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:A Fluorogenic Aryl Fluorosulfate for Intraorganellar Transthyretin Imaging in Living Cells and in Caenorhabditis elegans.
J.Am.Chem.Soc., 137, 2015
3L5O
DownloadVisualize
BU of 3l5o by Molmil
Crystal structure of protein with unknown function from DUF364 family (ZP_00559375.1) from Desulfitobacterium hafniense DCB-2 at 2.01 A resolution
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, IMIDAZOLE, ...
Authors:Joint Center for Structural Genomics, Joint Center for Structural Genomics (JCSG)
Deposit date:2009-12-22
Release date:2010-02-02
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structure of the first representative of Pfam family PF04016 (DUF364) reveals enolase and Rossmann-like folds that combine to form a unique active site with a possible role in heavy-metal chelation.
Acta Crystallogr.,Sect.F, 66, 2010
3LIU
DownloadVisualize
BU of 3liu by Molmil
Crystal structure of Putative cell adhesion protein (YP_001304840.1) from Parabacteroides distasonis ATCC 8503 at 2.05 A resolution
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-01-25
Release date:2010-02-09
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:A Distinct Type of Pilus from the Human Microbiome.
Cell, 165, 2016
4RDB
DownloadVisualize
BU of 4rdb by Molmil
Crystal structure of an immunoreactive 32 kDa antigen PG49 (PG_0181) from Porphyromonas gingivalis W83 at 1.45 A resolution (PSI Community Target, Nakayama)
Descriptor: 1,2-ETHANEDIOL, ACETONE, Immunoreactive 32 kDa antigen PG49
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2014-09-18
Release date:2014-12-03
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:A Distinct Type of Pilus from the Human Microbiome.
Cell, 165, 2016
4R8O
DownloadVisualize
BU of 4r8o by Molmil
Crystal structure of a DUF3836 family protein (BVU_1206) from Bacteroides vulgatus ATCC 8482 at 2.50 A resolution
Descriptor: Uncharacterized protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2014-09-02
Release date:2014-09-17
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of single-layer beta-sheet proteins evolved from beta-hairpin repeats.
Protein Sci., 28, 2019
4R03
DownloadVisualize
BU of 4r03 by Molmil
Crystal structure of a DUF3836 family protein (BDI_3222) from Parabacteroides distasonis ATCC 8503 at 1.50 A resolution
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CITRIC ACID, PHOSPHATE ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2014-07-29
Release date:2014-08-27
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structures of single-layer beta-sheet proteins evolved from beta-hairpin repeats.
Protein Sci., 28, 2019
4RBO
DownloadVisualize
BU of 4rbo by Molmil
Crystal structure of a Nanog homeobox (NANOG) from Homo sapiens at 3.30 A resolution
Descriptor: 5'-D(*CP*TP*TP*GP*AP*AP*TP*GP*GP*GP*CP*C)-3', 5'-D(*GP*GP*CP*CP*CP*AP*TP*TP*CP*AP*AP*G)-3', Putative homeobox protein NANOGP8
Authors:Joint Center for Structural Genomics (JCSG), Partnership for Stem Cell Biology (STEMCELL)
Deposit date:2014-09-12
Release date:2014-10-01
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure-based discovery of NANOG variant with enhanced properties to promote self-renewal and reprogramming of pluripotent stem cells.
Proc.Natl.Acad.Sci.USA, 112, 2015
3M82
DownloadVisualize
BU of 3m82 by Molmil
Crystal structure of Acetyl xylan esterase (TM0077) from THERMOTOGA MARITIMA at 2.40 A resolution (PMSF inhibitor complex structure)
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Acetyl xylan esterase, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-03-17
Release date:2010-05-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Functional and structural characterization of a thermostable acetyl esterase from Thermotoga maritima.
Proteins, 80, 2012
3MSW
DownloadVisualize
BU of 3msw by Molmil
Crystal structure of a Protein with unknown function (BF3112) from Bacteroides fragilis NCTC 9343 at 1.90 A resolution
Descriptor: CHLORIDE ION, R-1,2-PROPANEDIOL, uncharacterized protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-04-29
Release date:2010-06-09
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of single-layer beta-sheet proteins evolved from beta-hairpin repeats.
Protein Sci., 28, 2019
3M81
DownloadVisualize
BU of 3m81 by Molmil
Crystal structure of Acetyl xylan esterase (TM0077) from THERMOTOGA MARITIMA at 2.50 A resolution (native apo structure)
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Acetyl xylan esterase, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-03-17
Release date:2010-04-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Functional and structural characterization of a thermostable acetyl esterase from Thermotoga maritima.
Proteins, 80, 2012
3M83
DownloadVisualize
BU of 3m83 by Molmil
Crystal structure of Acetyl xylan esterase (TM0077) from THERMOTOGA MARITIMA at 2.12 A resolution (paraoxon inhibitor complex structure)
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Acetyl xylan esterase, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-03-17
Release date:2010-05-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Functional and structural characterization of a thermostable acetyl esterase from Thermotoga maritima.
Proteins, 80, 2012
4U6G
DownloadVisualize
BU of 4u6g by Molmil
Crystal structure of 10E8 Fab in complex with a hydrocarbon-stapled HIV-1 gp41 MPER peptide
Descriptor: 10E8 Fab Heavy Chain, 10E8 Fab Light Chain, SAH-MPER(662-683KKK)(B,q)
Authors:Ofek, G, Bird, G.H, Walensky, L.D, Kwong, P.D.
Deposit date:2014-07-28
Release date:2014-12-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (4.2012 Å)
Cite:Structural Fidelity and Neutralizing Antibody Binding Capacity of Hydrocarbon-Stapled HIV-1 Antigens
To be published
3N8U
DownloadVisualize
BU of 3n8u by Molmil
Crystal structure of an imelysin peptidase (BACOVA_03801) from Bacteroides ovatus at 1.44 A resolution
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-05-28
Release date:2010-07-28
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Structural and sequence analysis of imelysin-like proteins implicated in bacterial iron uptake.
Plos One, 6, 2011
3NL9
DownloadVisualize
BU of 3nl9 by Molmil
Crystal structure of a putative NTP pyrophosphohydrolase (Exig_1061) from EXIGUOBACTERIUM SP. 255-15 at 1.78 A resolution
Descriptor: 1,2-ETHANEDIOL, putative NTP pyrophosphohydrolase
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-06-21
Release date:2010-07-21
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structure of a putative NTP pyrophosphohydrolase: YP_001813558.1 from Exiguobacterium sibiricum 255-15.
Acta Crystallogr.,Sect.F, 66, 2010
3NPD
DownloadVisualize
BU of 3npd by Molmil
Crystal structure of a putative secreted protein (PA3611) from PSEUDOMONAS AERUGINOSA at 1.60 A resolution
Descriptor: 1,2-ETHANEDIOL, 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, SULFATE ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-06-28
Release date:2010-07-28
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of a putative quorum sensing-regulated protein (PA3611) from the Pseudomonas-specific DUF4146 family.
Proteins, 82, 2014
3O0F
DownloadVisualize
BU of 3o0f by Molmil
Crystal structure of a putative metal-dependent phosphoesterase (BAD_1165) from bifidobacterium adolescentis atcc 15703 at 1.94 A resolution
Descriptor: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, FE (III) ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-07-19
Release date:2010-08-25
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal structure of a metal-dependent phosphoesterase (YP_910028.1) from Bifidobacterium adolescentis: Computational prediction and experimental validation of phosphoesterase activity.
Proteins, 79, 2011
2QTP
DownloadVisualize
BU of 2qtp by Molmil
Crystal structure of a duf1185 family protein (spo0826) from silicibacter pomeroyi dss-3 at 2.10 A resolution
Descriptor: Uncharacterized protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2007-08-02
Release date:2007-08-21
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of the first representatives of Pfam family PF06684 (DUF1185) reveal a novel variant of the Bacillus chorismate mutase fold and suggest a role in amino-acid metabolism.
Acta Crystallogr.,Sect.F, 66, 2010
2QTD
DownloadVisualize
BU of 2qtd by Molmil
Crystal structure of a putative dinitrogenase (mj0327) from methanocaldococcus jannaschii dsm at 1.70 A resolution
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, TETRAETHYLENE GLYCOL, Uncharacterized protein MJ0327
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2007-08-01
Release date:2007-08-21
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:NMR structure of the protein NP_247299.1: comparison with the crystal structure.
Acta Crystallogr.,Sect.F, 66, 2010
2RA9
DownloadVisualize
BU of 2ra9 by Molmil
Crystal structure of a duf1285 family protein (sbal_2486) from shewanella baltica os155 at 1.40 A resolution
Descriptor: 1,2-ETHANEDIOL, SODIUM ION, Uncharacterized protein DUF1285
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2007-09-14
Release date:2007-10-16
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structures of the first representatives of Pfam family PF06938 (DUF1285) reveal a new fold with repeated structural motifs and possible involvement in signal transduction.
Acta Crystallogr.,Sect.F, 66, 2010
2RE3
DownloadVisualize
BU of 2re3 by Molmil
CRYSTAL STRUCTURE OF a DUF1285 family protein (SPO_0140) FROM SILICIBACTER POMEROYI DSS-3 AT 2.50 A RESOLUTION
Descriptor: GLYCEROL, Uncharacterized protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2007-09-25
Release date:2007-10-09
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of the first representatives of Pfam family PF06938 (DUF1285) reveal a new fold with repeated structural motifs and possible involvement in signal transduction.
Acta Crystallogr.,Sect.F, 66, 2010
2RLL
DownloadVisualize
BU of 2rll by Molmil
CCR5 Nt(7-15)
Descriptor: 9-mer from C-C chemokine receptor type 5
Authors:Bewley, C.A, Lam, S.N.
Deposit date:2007-07-21
Release date:2007-09-25
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Structures of the CCR5 N terminus and of a tyrosine-sulfated antibody with HIV-1 gp120 and CD4
Science, 317, 2007

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon