Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1O03
DownloadVisualize
BU of 1o03 by Molmil
Structure of Pentavalent Phosphorous Intermediate of an Enzyme Catalyzed Phosphoryl transfer Reaction observed on cocrystallization with Glucose 6-phosphate
Descriptor: 1,6-di-O-phosphono-alpha-D-glucopyranose, MAGNESIUM ION, beta-phosphoglucomutase
Authors:Lahiri, S.D, Zhang, G, Dunaway-Mariano, D, Allen, K.N.
Deposit date:2003-02-20
Release date:2003-03-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The pentacovalent phosphorus intermediate of a phosphoryl transfer reaction.
Science, 299, 2003
1O08
DownloadVisualize
BU of 1o08 by Molmil
Structure of Pentavalent Phosphorous Intermediate of an Enzyme Catalyzed Phosphoryl transfer Reaction observed on cocrystallization with Glucose 1-phosphate
Descriptor: 1,6-di-O-phosphono-alpha-D-glucopyranose, MAGNESIUM ION, beta-phosphoglucomutase
Authors:Lahiri, S.D, Zhang, G, Dunaway-Mariano, D, Allen, K.N.
Deposit date:2003-02-20
Release date:2003-03-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:The pentacovalent phosphorus intermediate of a phosphoryl transfer reaction.
Science, 299, 2003
4JB3
DownloadVisualize
BU of 4jb3 by Molmil
Crystal structure of BT_0970, a had family phosphatase from bacteroides thetaiotaomicron VPI-5482, TARGET EFI-501083, with bound sodium and glycerol, closed lid, ordered loop
Descriptor: GLYCEROL, Haloacid dehalogenase-like hydrolase, SODIUM ION
Authors:Vetting, M.W, Toro, R, Bhosle, R, Kumar, P.R, Ghosh, A, Al Obaidi, N.F, Stead, M, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Dunaway-Mariano, D, Allen, K.N, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-02-19
Release date:2013-03-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of bt_0970, a had family phosphatase from bacteroides thetaiotaomicron VPI-5482, TARGET EFI-501083, with bound sodium and glycerol, closed lid, ordered loop
To be Published
1XG3
DownloadVisualize
BU of 1xg3 by Molmil
Crystal structure of the C123S 2-methylisocitrate lyase mutant from Escherichia coli in complex with the reaction product, Mg(II)-pyruvate and succinate
Descriptor: MAGNESIUM ION, PYRUVIC ACID, Probable methylisocitrate lyase, ...
Authors:Liu, S, Lu, Z, Han, Y, Melamud, E, Dunaway-Mariano, D, Herzberg, O.
Deposit date:2004-09-16
Release date:2005-03-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structures of 2-Methylisocitrate Lyase in Complex with Product and with Isocitrate Inhibitor Provide Insight into Lyase Substrate Specificity, Catalysis and Evolution
Biochemistry, 44, 2005
1XG4
DownloadVisualize
BU of 1xg4 by Molmil
Crystal Structure of the C123S 2-Methylisocitrate Lyase Mutant from Escherichia coli in complex with the inhibitor isocitrate
Descriptor: ISOCITRIC ACID, MAGNESIUM ION, Probable methylisocitrate lyase
Authors:Liu, S, Lu, Z, Han, Y, Melamud, E, Dunaway-Mariano, D, Herzberg, O.
Deposit date:2004-09-16
Release date:2005-03-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structures of 2-Methylisocitrate Lyase in Complex with Product and with Isocitrate Inhibitor Provide Insight into Lyase Substrate Specificity, Catalysis and Evolution
Biochemistry, 44, 2005
1Z4O
DownloadVisualize
BU of 1z4o by Molmil
Structure of beta-phosphoglucomutase with inhibitor bound alpha-galactose 1-phosphate
Descriptor: 1-O-phosphono-alpha-D-galactopyranose, Beta-phosphoglucomutase, MAGNESIUM ION
Authors:Tremblay, L.W, Zhang, G, Dai, J, Dunaway-Mariano, D, Allen, K.N.
Deposit date:2005-03-16
Release date:2005-04-19
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Chemical Confirmation of a Pentavalent Phosphorane in Complex with beta-Phosphoglucomutase
J.Am.Chem.Soc., 127, 2005
1Z4N
DownloadVisualize
BU of 1z4n by Molmil
Structure of beta-phosphoglucomutase with inhibitor bound alpha-galactose 1-phosphate cocrystallized with Fluoride
Descriptor: 1-O-phosphono-alpha-D-galactopyranose, Beta-phosphoglucomutase, MAGNESIUM ION
Authors:Tremblay, L.W, Zhang, G, Dai, J, Dunaway-Mariano, D, Allen, K.N.
Deposit date:2005-03-16
Release date:2005-04-19
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Chemical Confirmation of a Pentavalent Phosphorane in Complex with beta-Phosphoglucomutase
J.Am.Chem.Soc., 127, 2005
1YMQ
DownloadVisualize
BU of 1ymq by Molmil
HAD Superfamily Phosphotransferase Substrate Diversification: Structure and Function Analysis of the HAD Subclass IIB Sugar Phosphatase BT4131
Descriptor: MAGNESIUM ION, SULFATE ION, sugar-phosphate phosphatase BT4131
Authors:Lu, Z, Dunaway-Mariano, D, Allen, K.N.
Deposit date:2005-01-21
Release date:2005-06-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:HAD Superfamily Phosphotransferase Substrate Diversification: Structure and Function Analysis of HAD Subclass IIB Sugar Phosphatase BT4131.
Biochemistry, 44, 2005
1ZLP
DownloadVisualize
BU of 1zlp by Molmil
Petal death protein PSR132 with cysteine-linked glutaraldehyde forming a thiohemiacetal adduct
Descriptor: 5-HYDROXYPENTANAL, MAGNESIUM ION, petal death protein
Authors:Teplyakov, A, Liu, S, Lu, Z, Howard, A, Dunaway-Mariano, D, Herzberg, O.
Deposit date:2005-05-08
Release date:2006-01-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of the Petal Death Protein from Carnation Flower.
Biochemistry, 44, 2005
1ZOL
DownloadVisualize
BU of 1zol by Molmil
native beta-PGM
Descriptor: MAGNESIUM ION, beta-phosphoglucomutase
Authors:Zhang, G, Tremblay, L.W, Dai, J, Wang, L, Dunaway-Mariano, D, Allen, K.N.
Deposit date:2005-05-13
Release date:2005-08-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Catalytic cycling in beta-phosphoglucomutase: a kinetic and structural analysis
Biochemistry, 44, 2005
2AAF
DownloadVisualize
BU of 2aaf by Molmil
Structure of H278A arginine deiminase with L-arginine forming a S-alkylthiouronium reaction intermediate
Descriptor: Arginine deiminase
Authors:Galkin, A, Lu, X, Dunaway-Mariano, D, Herzberg, O.
Deposit date:2005-07-13
Release date:2005-08-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures Representing the Michaelis Complex and the Thiouronium Reaction Intermediate of Pseudomonas aeruginosa Arginine Deiminase.
J.Biol.Chem., 280, 2005
2ABR
DownloadVisualize
BU of 2abr by Molmil
Structure of D280A arginine deiminase with L-arginine forming a S-alkylthiouronium reaction intermediate
Descriptor: Arginine deiminase
Authors:Galkin, A, Lu, X, Dunaway-Mariano, D, Herzberg, O.
Deposit date:2005-07-15
Release date:2005-08-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structures Representing the Michaelis Complex and the Thiouronium Reaction Intermediate of Pseudomonas aeruginosa Arginine Deiminase.
J.Biol.Chem., 280, 2005
2A9G
DownloadVisualize
BU of 2a9g by Molmil
Structure of C406A arginine deiminase in complex with L-arginine
Descriptor: ARGININE, Arginine deiminase
Authors:Galkin, A, Lu, X, Dunaway-Mariano, D, Herzberg, O.
Deposit date:2005-07-11
Release date:2005-08-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures Representing the Michaelis Complex and the Thiouronium Reaction Intermediate of Pseudomonas aeruginosa Arginine Deiminase.
J.Biol.Chem., 280, 2005
2ACI
DownloadVisualize
BU of 2aci by Molmil
Structure of D166A arginine deiminase
Descriptor: Arginine deiminase
Authors:Galkin, A, Lu, X, Dunaway-Mariano, D, Herzberg, O.
Deposit date:2005-07-18
Release date:2005-08-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structures Representing the Michaelis Complex and the Thiouronium Reaction Intermediate of Pseudomonas aeruginosa Arginine Deiminase.
J.Biol.Chem., 280, 2005
4DWO
DownloadVisualize
BU of 4dwo by Molmil
Crystal structure of a haloacid dehalogenase-like hydrolase (Target EFI-900331) from Bacteroides thetaiotaomicron with bound Mg crystal form II
Descriptor: GLYCEROL, Haloacid dehalogenase-like hydrolase, MAGNESIUM ION
Authors:Vetting, M.W, Wasserman, S.R, Morisco, L.L, Sojitra, S, Allen, K.N, Dunaway-Mariano, D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2012-02-26
Release date:2012-03-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of a haloacid dehalogenase-like hydrolase (Target EFI-900331) from Bacteroides thetaiotaomicron with bound Mg crystal form II
To be Published
4DW8
DownloadVisualize
BU of 4dw8 by Molmil
Crystal structure of a haloacid dehalogenase-like hydrolase (Target EFI-900331) from Bacteroides thetaiotaomicron with bound Na crystal form I
Descriptor: Haloacid dehalogenase-like hydrolase, SODIUM ION, UNKNOWN LIGAND
Authors:Vetting, M.W, Wasserman, S.R, Morisco, L.L, Sojitra, S, Allen, K.N, Dunaway-Mariano, D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2012-02-24
Release date:2012-03-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.502 Å)
Cite:Crystal structure of a haloacid dehalogenase-like hydrolase (Target EFI-900331) from Bacteroides thetaiotaomicron with bound Na crystal form I
To be Published
3E84
DownloadVisualize
BU of 3e84 by Molmil
Structure-function Analysis of 2-Keto-3-deoxy-D-glycero-D-galacto-nononate-9-phosphate (KDN) Phosphatase Defines a New Clad Within the Type C0 HAD Subfamily
Descriptor: 1,2-ETHANEDIOL, Acylneuraminate cytidylyltransferase, DI(HYDROXYETHYL)ETHER, ...
Authors:Lu, Z, Wang, L, Dunaway-Mariano, D, Allen, K.N.
Deposit date:2008-08-19
Release date:2008-11-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure-Function Analysis of 2-Keto-3-deoxy-D-glycero-D-galactonononate-9-phosphate Phosphatase Defines Specificity Elements in Type C0 Haloalkanoate Dehalogenase Family Members.
J.Biol.Chem., 284, 2009
3E81
DownloadVisualize
BU of 3e81 by Molmil
Structure-function Analysis of 2-Keto-3-deoxy-D-glycero-D-galacto-nononate-9-phosphate (KDN) Phosphatase Defines a New Clad Within the Type C0 HAD Subfamily
Descriptor: 1,2-ETHANEDIOL, Acylneuraminate cytidylyltransferase, DI(HYDROXYETHYL)ETHER, ...
Authors:Lu, Z, Wang, L, Dunaway-Mariano, D, Allen, K.N.
Deposit date:2008-08-19
Release date:2008-11-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.629 Å)
Cite:Structure-Function Analysis of 2-Keto-3-deoxy-D-glycero-D-galactonononate-9-phosphate Phosphatase Defines Specificity Elements in Type C0 Haloalkanoate Dehalogenase Family Members.
J.Biol.Chem., 284, 2009
4JDP
DownloadVisualize
BU of 4jdp by Molmil
Crystal structure of probable p-nitrophenyl phosphatase (pho2) (target EFI-501307) from Archaeoglobus fulgidus DSM 4304 with Magnesium bound
Descriptor: CHLORIDE ION, MAGNESIUM ION, p-nitrophenyl phosphatase (Pho2)
Authors:Patskovsky, Y, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Zencheck, W.D, Imker, H.J, Al Obaidi, N, Stead, M, Love, J, Allen, K.N, Dunaway-Mariano, D, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-02-25
Release date:2013-03-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal structure of probable p-nitrophenyl phosphatase from Archaeoglobus fulgidus.
To be Published
1S2W
DownloadVisualize
BU of 1s2w by Molmil
Crystal structure of phosphoenolpyruvate mutase in high ionic strength
Descriptor: Phosphoenolpyruvate phosphomutase, SULFATE ION
Authors:Liu, S, Lu, Z, Han, Y, Jia, Y, Howard, A, Dunaway-Mariano, D, Herzberg, O.
Deposit date:2004-01-11
Release date:2004-05-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Conformational Flexibility of PEP Mutase
Biochemistry, 43, 2004
1S2T
DownloadVisualize
BU of 1s2t by Molmil
Crystal Structure Of Apo Phosphoenolpyruvate Mutase
Descriptor: Phosphoenolpyruvate phosphomutase
Authors:Liu, S, Lu, Z, Han, Y, Jia, Y, Howard, A, Dunaway-Mariano, D, Herzberg, O.
Deposit date:2004-01-11
Release date:2004-05-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Conformational Flexibility of PEP Mutase
Biochemistry, 43, 2004
1S2U
DownloadVisualize
BU of 1s2u by Molmil
Crystal structure of the D58A phosphoenolpyruvate mutase mutant protein
Descriptor: DI(HYDROXYETHYL)ETHER, Phosphoenolpyruvate phosphomutase
Authors:Liu, S, Lu, Z, Han, Y, Jia, Y, Howard, A, Dunaway-Mariano, D, Herzberg, O.
Deposit date:2004-01-11
Release date:2004-05-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Conformational Flexibility of PEP Mutase
Biochemistry, 43, 2004
1RDF
DownloadVisualize
BU of 1rdf by Molmil
G50P mutant of phosphonoacetaldehyde hydrolase in complex with substrate analogue vinyl sulfonate
Descriptor: ETHANESULFONIC ACID, MAGNESIUM ION, phosphonoacetaldehyde hydrolase
Authors:Lahiri, S.D, Zhang, G, Dunaway-Mariano, D, Allen, K.N.
Deposit date:2003-11-05
Release date:2004-08-31
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Analysis of the substrate specificity loop of the HAD superfamily cap domain
Biochemistry, 43, 2004
1RQN
DownloadVisualize
BU of 1rqn by Molmil
Phosphonoacetaldehyde hydrolase complexed with magnesium
Descriptor: MAGNESIUM ION, Phosphonoacetaldehyde Hydrolase
Authors:Morais, M.C, Zhang, G, Zhang, W, Olsen, D.B, Dunaway-Mariano, D, Allen, K.N.
Deposit date:2003-12-05
Release date:2004-04-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:X-ray crystallographic and site-directed mutagenesis analysis of the mechanism of Schiff-base formation in phosphonoacetaldehyde hydrolase catalysis
J.Biol.Chem., 279, 2004
1S2V
DownloadVisualize
BU of 1s2v by Molmil
Crystal structure of phosphoenolpyruvate mutase complexed with Mg(II)
Descriptor: MAGNESIUM ION, Phosphoenolpyruvate phosphomutase
Authors:Liu, S, Lu, Z, Han, Y, Jia, Y, Howard, A, Dunaway-Mariano, D, Herzberg, O.
Deposit date:2004-01-11
Release date:2004-05-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Conformational Flexibility of PEP Mutase
Biochemistry, 43, 2004

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon