Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7RYJ
DownloadVisualize
BU of 7ryj by Molmil
Cryo EM analysis reveals inherent flexibility of authentic murine papillomavirus capsids
Descriptor: Major capsid protein L1
Authors:Hartmann, S.R, Hafenstein, S.
Deposit date:2021-08-25
Release date:2021-11-10
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo EM Analysis Reveals Inherent Flexibility of Authentic Murine Papillomavirus Capsids.
Viruses, 13, 2021
5BNM
DownloadVisualize
BU of 5bnm by Molmil
E. coli FabH with Small Molecule Inhibitor 1
Descriptor: 3-oxoacyl-[acyl-carrier-protein] synthase 3, N-{[3'-(hydroxymethyl)biphenyl-4-yl]methyl}benzenesulfonamide, SULFATE ION, ...
Authors:Kazmirski, S.L, McKinney, D.C.
Deposit date:2015-05-26
Release date:2016-05-18
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Antibacterial FabH Inhibitors with Mode of Action Validated in Haemophilus influenzae by in Vitro Resistance Mutation Mapping.
Acs Infect Dis., 2, 2016
7VRB
DownloadVisualize
BU of 7vrb by Molmil
Structure of the Human BRG1/SS18 complex
Descriptor: SMARCA4 protein,Protein SSXT
Authors:Cheng, Y, Chen, F, Zhou, H, Long, J.
Deposit date:2021-10-22
Release date:2022-05-25
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.389 Å)
Cite:Phase transition and remodeling complex assembly are important for SS18-SSX oncogenic activity in synovial sarcomas.
Nat Commun, 13, 2022
7E2R
DownloadVisualize
BU of 7e2r by Molmil
The ligand-free structure of Arabidopsis thaliana GUN4
Descriptor: Tetrapyrrole-binding protein, chloroplastic
Authors:Liu, L, Hu, J.
Deposit date:2021-02-07
Release date:2021-08-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis of bilin binding by the chlorophyll biosynthesis regulator GUN4.
Protein Sci., 30, 2021
7VQQ
DownloadVisualize
BU of 7vqq by Molmil
Cryo-EM structure of amyloid fibril formed by FUS low complexity domain
Descriptor: fusion protein of mCerulean and FUS LCD
Authors:Sun, Y.P, Xia, W.C, Liu, C.
Deposit date:2021-10-20
Release date:2021-12-22
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Molecular structure of an amyloid fibril formed by FUS low-complexity domain.
Iscience, 25, 2022
7V6P
DownloadVisualize
BU of 7v6p by Molmil
Crystal structure of human sNASP TPR domain
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Liu, C.P, Xu, R.M.
Deposit date:2021-08-20
Release date:2021-12-29
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Distinct histone H3-H4 binding modes of sNASP reveal the basis for cooperation and competition of histone chaperones.
Genes Dev., 35, 2021
7V6Q
DownloadVisualize
BU of 7v6q by Molmil
Crystal structure of sNASP-ASF1A-H3.1-H4 complex
Descriptor: GLYCEROL, Histone H3.1, Histone H4, ...
Authors:Liu, C.P, Xu, R.M.
Deposit date:2021-08-20
Release date:2021-12-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Distinct histone H3-H4 binding modes of sNASP reveal the basis for cooperation and competition of histone chaperones.
Genes Dev., 35, 2021
7E2U
DownloadVisualize
BU of 7e2u by Molmil
Synechocystis GUN4 in complex with phytochrome
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-[5-[(~{Z})-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-2-[(~{Z})-[5-[(~{Z})-[(4~{R})-3-ethyl-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-pyrrol-2-ylidene]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid, CHLORIDE ION, ...
Authors:Liu, L, Hu, J.
Deposit date:2021-02-07
Release date:2021-08-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis of bilin binding by the chlorophyll biosynthesis regulator GUN4.
Protein Sci., 30, 2021
7E2T
DownloadVisualize
BU of 7e2t by Molmil
Synechocystis GUN4 in complex with phycocyanobilin
Descriptor: 3-[2-[(~{Z})-[5-[(~{Z})-[(4~{R})-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-pyrrol-2-ylidene]methyl]-5-[(~{Z})-(4-ethyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid, CHLORIDE ION, Ycf53-like protein
Authors:Liu, L, Hu, J.
Deposit date:2021-02-07
Release date:2021-08-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Structural basis of bilin binding by the chlorophyll biosynthesis regulator GUN4.
Protein Sci., 30, 2021
7E2S
DownloadVisualize
BU of 7e2s by Molmil
Synechocystis GUN4 in complex with biliverdin IXa
Descriptor: BILIVERDINE IX ALPHA, GLYCEROL, Ycf53-like protein
Authors:Liu, L, Hu, J.
Deposit date:2021-02-07
Release date:2021-08-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Structural basis of bilin binding by the chlorophyll biosynthesis regulator GUN4.
Protein Sci., 30, 2021
4P75
DownloadVisualize
BU of 4p75 by Molmil
PheRS in complex with compound 4a
Descriptor: 3-(3-methoxyphenyl)-5-(trifluoromethyl)-1H-pyrazole, Phenylalanine--tRNA ligase alpha subunit, Phenylalanine--tRNA ligase beta subunit
Authors:Ferguson, A.D.
Deposit date:2014-03-25
Release date:2014-06-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:The role of a novel auxiliary pocket in bacterial phenylalanyl-tRNA synthetase druggability.
J.Biol.Chem., 289, 2014
7TUL
DownloadVisualize
BU of 7tul by Molmil
Woodchuck hepatitis small surface protein without cytosolic and antigenic loops
Descriptor: Large envelope protein
Authors:Liu, H, Wang, J.C.Y.
Deposit date:2022-02-02
Release date:2022-08-24
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:Cryo-EM structures of human hepatitis B and woodchuck hepatitis virus small spherical subviral particles.
Sci Adv, 8, 2022
7TUK
DownloadVisualize
BU of 7tuk by Molmil
Small hepatitis B virus surface protein without cytosolic and antigenic loops
Descriptor: SAg protein
Authors:Liu, H, Wang, J.C.Y.
Deposit date:2022-02-02
Release date:2022-08-24
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (6.3 Å)
Cite:Cryo-EM structures of human hepatitis B and woodchuck hepatitis virus small spherical subviral particles.
Sci Adv, 8, 2022
7JKB
DownloadVisualize
BU of 7jkb by Molmil
2xVH Fab
Descriptor: Anti-Her2, Anti-lysozyme
Authors:Lord, D.M, Zhou, Y.F.
Deposit date:2020-07-28
Release date:2020-11-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Bringing the Heavy Chain to Light: Creating a Symmetric, Bivalent IgG-Like Bispecific.
Antibodies, 9, 2020
4P72
DownloadVisualize
BU of 4p72 by Molmil
PheRS in complex with compound 2a
Descriptor: 2-{3-[(4-chloropyridin-2-yl)amino]phenoxy}-N-methylacetamide, Phenylalanine--tRNA ligase alpha subunit, Phenylalanine--tRNA ligase beta subunit
Authors:Ferguson, A.D.
Deposit date:2014-03-25
Release date:2014-06-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:The role of a novel auxiliary pocket in bacterial phenylalanyl-tRNA synthetase druggability.
J.Biol.Chem., 289, 2014
4P74
DownloadVisualize
BU of 4p74 by Molmil
PheRS in complex with compound 3a
Descriptor: N-[(3S)-1,1-dioxidotetrahydrothiophen-3-yl]-2-[(4-methylphenoxy)methyl]-1,3-thiazole-4-carboxamide, Phenylalanine--tRNA ligase alpha subunit, Phenylalanine--tRNA ligase beta subunit
Authors:Ferguson, A.D.
Deposit date:2014-03-25
Release date:2014-06-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The role of a novel auxiliary pocket in bacterial phenylalanyl-tRNA synthetase druggability.
J.Biol.Chem., 289, 2014
4P71
DownloadVisualize
BU of 4p71 by Molmil
Apo PheRS from P. aeuriginosa
Descriptor: Phenylalanine--tRNA ligase alpha subunit, Phenylalanine--tRNA ligase beta subunit
Authors:Ferguson, A.D.
Deposit date:2014-03-25
Release date:2014-06-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:The role of a novel auxiliary pocket in bacterial phenylalanyl-tRNA synthetase druggability.
J.Biol.Chem., 289, 2014
7VPN
DownloadVisualize
BU of 7vpn by Molmil
Crystal Structure of the dioxygenase CcTet from Coprinopsis cinereain in complex with Mn(II) and N-Oxalylglycine
Descriptor: CcTet molecule, MANGANESE (II) ION, N-OXALYLGLYCINE
Authors:Mu, Y.J, Zhang, L, Zhang, L.
Deposit date:2021-10-17
Release date:2022-03-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A fungal dioxygenase CcTet serves as a eukaryotic 6mA demethylase on duplex DNA.
Nat.Chem.Biol., 18, 2022
4P73
DownloadVisualize
BU of 4p73 by Molmil
PheRS in complex with compound 1a
Descriptor: 1-{3-[(4-pyridin-2-ylpiperazin-1-yl)sulfonyl]phenyl}-3-(1,3-thiazol-2-yl)urea, Phenylalanine--tRNA ligase alpha subunit, Phenylalanine--tRNA ligase beta subunit
Authors:Ferguson, A.D.
Deposit date:2014-03-25
Release date:2014-06-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:The role of a novel auxiliary pocket in bacterial phenylalanyl-tRNA synthetase druggability.
J.Biol.Chem., 289, 2014
2OZX
DownloadVisualize
BU of 2ozx by Molmil
Solution structure of human phosphohistidine phosphatase 1 in phosphate free form
Descriptor: 14 kDa phosphohistidine phosphatase
Authors:Gong, W, Cui, G, Jin, C, Xia, B.
Deposit date:2007-02-27
Release date:2008-03-25
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure and catalytic mechanism of human protein histidine phosphatase 1.
Biochem.J., 418, 2009
7W5P
DownloadVisualize
BU of 7w5p by Molmil
Crystal Structure of the dioxygenase CcTet from Coprinopsis cinereain bound to 12bp N6-methyldeoxyadenine (6mA) containing duplex DNA
Descriptor: CcTet, DNA, DNA (12-MER), ...
Authors:Mu, Y.J, Zhang, L, Zhang, L.
Deposit date:2021-11-30
Release date:2022-03-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A fungal dioxygenase CcTet serves as a eukaryotic 6mA demethylase on duplex DNA.
Nat.Chem.Biol., 18, 2022
8JKK
DownloadVisualize
BU of 8jkk by Molmil
Crystal Structure of the dioxygenase CcTet from Coprinopsis cinerea bound to 12bp 5-methylcytosine (5mC) containing duplex DNA
Descriptor: 2OGFeDO JBP1/TET oxygenase domain-containing protein, DNA (5'-D(P*CP*GP*AP*TP*CP*(5CM)P*GP*CP*TP*AP*CP*G)-3'), DNA (5'-D(P*CP*GP*TP*AP*GP*CP*TP*GP*AP*TP*CP*G)-3'), ...
Authors:Zhang, L, Zhang, L.
Deposit date:2023-06-01
Release date:2024-03-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular basis of an atypical dsDNA 5mC/6mA bifunctional dioxygenase CcTet from Coprinopsis cinerea in catalyzing dsDNA 5mC demethylation.
Nucleic Acids Res., 52, 2024
8JNK
DownloadVisualize
BU of 8jnk by Molmil
Crystal structure of human ALKBH3 bound to ssDNA through active site crosslink
Descriptor: Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3, DNA, MANGANESE (II) ION, ...
Authors:Zhang, L.
Deposit date:2023-06-06
Release date:2024-01-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:The Molecular Basis of Human ALKBH3 Mediated RNA N 1 -methyladenosine (m 1 A) Demethylation.
Angew.Chem.Int.Ed.Engl., 63, 2024
8JNR
DownloadVisualize
BU of 8jnr by Molmil
Crystal structure of human ALKBH3 bound to 3mC containing ssDNA through distal crosslink
Descriptor: Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3, DNA, MANGANESE (II) ION, ...
Authors:Zhang, L.
Deposit date:2023-06-06
Release date:2024-01-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.66 Å)
Cite:The Molecular Basis of Human ALKBH3 Mediated RNA N 1 -methyladenosine (m 1 A) Demethylation.
Angew.Chem.Int.Ed.Engl., 63, 2024
3TWD
DownloadVisualize
BU of 3twd by Molmil
glmuC1 in complex with an antibacterial inhibitor
Descriptor: 4-({5-[(4-aminophenyl)(phenyl)sulfamoyl]-2,4-dimethoxyphenyl}amino)-4-oxobutanoic acid, Bifunctional protein glmU, SULFATE ION
Authors:Lahiri, S, Otterbein, L.
Deposit date:2011-09-21
Release date:2011-10-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:In Vitro Validation of Acetyltransferase Activity of GlmU as an Antibacterial Target in Haemophilus influenzae.
J.Biol.Chem., 286, 2011

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon