Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7WNB
DownloadVisualize
BU of 7wnb by Molmil
Crystal structure of SARS-CoV-2 spike receptor-binding domain (RBD) in complex with NCV2SG48 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab Heavy chain, Fab Light chain, ...
Authors:Yamamoto, A, Higashiura, A.
Deposit date:2022-01-18
Release date:2023-04-19
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Structural basis of spike RBM-specific human antibodies counteracting broad SARS-CoV-2 variants.
Commun Biol, 6, 2023
4XCO
DownloadVisualize
BU of 4xco by Molmil
Signal-sequence induced conformational changes in the signal recognition particle
Descriptor: MAGNESIUM ION, RNA, SODIUM ION, ...
Authors:Hainzl, T, Sauer-Eriksson, A.E.
Deposit date:2014-12-18
Release date:2015-06-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Signal-sequence induced conformational changes in the signal recognition particle.
Nat Commun, 6, 2015
7F5G
DownloadVisualize
BU of 7f5g by Molmil
The crystal structure of RBD-Nanobody complex, DL4 (SA4)
Descriptor: ACETATE ION, GLYCEROL, Nanobody DL4, ...
Authors:Li, T, Lai, Y, Zhou, Y, Tan, J, Li, D.
Deposit date:2021-06-22
Release date:2022-05-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Isolation, characterization, and structure-based engineering of a neutralizing nanobody against SARS-CoV-2.
Int.J.Biol.Macromol., 209, 2022
7F5H
DownloadVisualize
BU of 7f5h by Molmil
The crystal structure of RBD-Nanobody complex, DL28 (SC4)
Descriptor: GLYCEROL, Nanobody DL28, PHOSPHATE ION, ...
Authors:Luo, Z.P, Li, T, Lai, Y, Zhou, Y, Tan, J, Li, D.
Deposit date:2021-06-22
Release date:2022-06-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Characterization of a Neutralizing Nanobody With Broad Activity Against SARS-CoV-2 Variants.
Front Microbiol, 13, 2022
7XKE
DownloadVisualize
BU of 7xke by Molmil
Cryo-EM structure of DHEA-ADGRG2-FL-Gs complex
Descriptor: 3-BETA-HYDROXY-5-ANDROSTEN-17-ONE, Adhesion G-protein coupled receptor G2, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Guo, S.C, Xiao, P, Lin, H, Sun, J.P, Yu, X.
Deposit date:2022-04-19
Release date:2022-08-10
Last modified:2023-03-15
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structures of the ADGRG2-G s complex in apo and ligand-bound forms.
Nat.Chem.Biol., 18, 2022
7XKF
DownloadVisualize
BU of 7xkf by Molmil
Cryo-EM structure of DHEA-ADGRG2-BT-Gs complex at lower state
Descriptor: 3-BETA-HYDROXY-5-ANDROSTEN-17-ONE, Adhesion G-protein coupled receptor G2, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Guo, S.C, Xiao, P, Lin, H, Sun, J.P, Yu, X.
Deposit date:2022-04-19
Release date:2022-08-10
Last modified:2023-03-15
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Structures of the ADGRG2-G s complex in apo and ligand-bound forms.
Nat.Chem.Biol., 18, 2022
7XKD
DownloadVisualize
BU of 7xkd by Molmil
Cryo-EM structure of DHEA-ADGRG2-BT-Gs complex
Descriptor: 3-BETA-HYDROXY-5-ANDROSTEN-17-ONE, Adhesion G-protein coupled receptor G2, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Guo, S.C, Xiao, P, Lin, H, Sun, J.P, Yu, X.
Deposit date:2022-04-19
Release date:2022-08-10
Last modified:2023-03-15
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Structures of the ADGRG2-G s complex in apo and ligand-bound forms.
Nat.Chem.Biol., 18, 2022
2IIB
DownloadVisualize
BU of 2iib by Molmil
Crystal structure of Pasteurella multocida sialyltransferase D141N mutant with CMP bound
Descriptor: Alpha-2,3/2,6-sialyltransferase/sialidase, CYTIDINE-5'-MONOPHOSPHATE
Authors:Ni, L, Fisher, A.J.
Deposit date:2006-09-27
Release date:2007-08-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural analysis of multifunctional sialyltransferase from Pasteurella multocida.
To be Published
6J1X
DownloadVisualize
BU of 6j1x by Molmil
WWP1 close conformation
Descriptor: GLYCEROL, NEDD4-like E3 ubiquitin-protein ligase WWP1
Authors:Liu, Z.H.
Deposit date:2018-12-30
Release date:2019-07-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A multi-lock inhibitory mechanism for fine-tuning enzyme activities of the HECT family E3 ligases.
Nat Commun, 10, 2019
6JGF
DownloadVisualize
BU of 6jgf by Molmil
Crystal structure of Se-Met CadR from P. putida with a 21 residue C-terminal truncation
Descriptor: CadR, PHOSPHATE ION
Authors:Liu, X.C, Gan, J.H, Chen, H.
Deposit date:2019-02-13
Release date:2019-09-25
Last modified:2019-10-23
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Selective cadmium regulation mediated by a cooperative binding mechanism in CadR.
Proc.Natl.Acad.Sci.USA, 116, 2019
6JGV
DownloadVisualize
BU of 6jgv by Molmil
Crystal structure of the transcriptional regulator CadR from P. putida
Descriptor: CadR
Authors:Liu, X.C, Gan, J.H, Chen, H.
Deposit date:2019-02-15
Release date:2019-09-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Selective cadmium regulation mediated by a cooperative binding mechanism in CadR.
Proc.Natl.Acad.Sci.USA, 116, 2019
6J1Y
DownloadVisualize
BU of 6j1y by Molmil
Semi-open conformation E3 ligase
Descriptor: GLYCEROL, NEDD4-like E3 ubiquitin-protein ligase WWP1
Authors:Liu, Z.H.
Deposit date:2018-12-30
Release date:2019-07-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:A multi-lock inhibitory mechanism for fine-tuning enzyme activities of the HECT family E3 ligases.
Nat Commun, 10, 2019
6JNI
DownloadVisualize
BU of 6jni by Molmil
Crystal structure of the transcriptional regulator CadR from P. putida in complex with Zinc(II) and DNA
Descriptor: CadR, DNA (25-MER), ZINC ION
Authors:Liu, X.C, Gan, J.H, Chen, H.
Deposit date:2019-03-16
Release date:2019-09-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Selective cadmium regulation mediated by a cooperative binding mechanism in CadR.
Proc.Natl.Acad.Sci.USA, 116, 2019
2IHK
DownloadVisualize
BU of 2ihk by Molmil
crystal structure of multifunctional sialyltransferase from pasteurella multocida with CMP-3F(equatorial)-Neu5Ac bound
Descriptor: Alpha-2,3/2,6-sialyltransferase/sialidase, CYTIDINE-5'-MONOPHOSPHATE-3-FLUORO-N-ACETYL-NEURAMINIC ACID
Authors:Fisher, A.J, Ni, L.
Deposit date:2006-09-26
Release date:2007-05-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structures of Pasteurella multocida Sialyltransferase Complexes with Acceptor and Donor Analogues Reveal Substrate Binding Sites and Catalytic Mechanism.
Biochemistry, 46, 2007
2IHJ
DownloadVisualize
BU of 2ihj by Molmil
crystal structure of multifunctional sialyltransferase from pasteurella multocida with CMP-3F-Neu5Ac bound
Descriptor: Alpha-2,3/2,6-sialyltransferase/sialidase, CYTIDINE-5'-MONOPHOSPHATE-3-FLUORO-N-ACETYL-NEURAMINIC ACID
Authors:Fisher, A.J, Ni, L.
Deposit date:2006-09-26
Release date:2007-05-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of Pasteurella multocida Sialyltransferase Complexes with Acceptor and Donor Analogues Reveal Substrate Binding Sites and Catalytic Mechanism.
Biochemistry, 46, 2007
2IIQ
DownloadVisualize
BU of 2iiq by Molmil
Crystal structure of Pasteurella multocida sialyltransferase in an open conformation with CMP bound
Descriptor: Alpha-2,3/2,6-sialyltransferase/sialidase, CYTIDINE-5'-MONOPHOSPHATE
Authors:Ni, L, Fisher, A.J.
Deposit date:2006-09-28
Release date:2007-08-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural analysis of multifunctional sialyltransferase from Pasteurella multocida.
To be Published
2IHZ
DownloadVisualize
BU of 2ihz by Molmil
Crystal structure of multifunctional sialyltransferase from pasteurella multocida with CMP-3F-Neu5Ac and alpha-lactose bound
Descriptor: Alpha-2,3/2,6-sialyltransferase/sialidase, CYTIDINE-5'-MONOPHOSPHATE-3-FLUORO-N-ACETYL-NEURAMINIC ACID, beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose
Authors:Fisher, A.J, Ni, L.
Deposit date:2006-09-27
Release date:2007-05-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of Pasteurella multocida Sialyltransferase Complexes with Acceptor and Donor Analogues Reveal Substrate Binding Sites and Catalytic Mechanism.
Biochemistry, 46, 2007
2II6
DownloadVisualize
BU of 2ii6 by Molmil
Crystal structure of Pasteurella multocida sialyltransferase D141N mutant in open conformation with CMP bound
Descriptor: Alpha-2,3/2,6-sialyltransferase/sialidase, CYTIDINE-5'-MONOPHOSPHATE
Authors:Fisher, A.J, Ni, L.
Deposit date:2006-09-27
Release date:2007-08-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural analysis of multifunctional sialyltransferase from Pasteurella multocida.
To be Published
2ILV
DownloadVisualize
BU of 2ilv by Molmil
crystal structure of multifunctional sialyltransferase from Pasteurella multocida with CMP and alpha-lactose bound
Descriptor: Alpha-2,3/2,6-sialyltransferase/sialidase, CYTIDINE-5'-MONOPHOSPHATE, beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose
Authors:Fisher, A.J, Ni, L.
Deposit date:2006-10-03
Release date:2007-05-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Crystal Structures of Pasteurella multocida Sialyltransferase Complexes with Acceptor and Donor Analogues Reveal Substrate Binding Sites and Catalytic Mechanism.
Biochemistry, 46, 2007
6IYR
DownloadVisualize
BU of 6iyr by Molmil
Crystal Structure of the acyltransferase domain from module 8 of the salinomycin polyketide synthase
Descriptor: PHOSPHATE ION, Type I modular polyketide synthase
Authors:Zhang, F, Zheng, J.
Deposit date:2018-12-17
Release date:2019-07-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural Insights into the Substrate Specificity of Acyltransferases from Salinomycin Polyketide Synthase.
Biochemistry, 58, 2019
3C2H
DownloadVisualize
BU of 3c2h by Molmil
Crystal Structure of SYS-1 at 2.6A resolution
Descriptor: CITRATE ANION, GLYCEROL, Sys-1 protein
Authors:Liu, J, Phillips, B.T, Amaya, M.F, Kimble, J, Xu, W.
Deposit date:2008-01-25
Release date:2008-05-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The C. elegans SYS-1 protein is a bona fide beta-catenin.
Dev.Cell, 14, 2008
6JWE
DownloadVisualize
BU of 6jwe by Molmil
structure of RET G-quadruplex in complex with colchicine
Descriptor: DNA (5'-D(*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*GP*GP*GP*GP*T)-3'), N-[(7S)-1,2,3,10-tetramethoxy-9-oxo-6,7-dihydro-5H-benzo[d]heptalen-7-yl]ethanamide
Authors:Wang, F, Wang, C, Liu, Y, Lan, W.X, Li, Y.M, Wang, R.X, Cao, C.
Deposit date:2019-04-20
Release date:2020-02-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Colchicine selective interaction with oncogene RET G-quadruplex revealed by NMR.
Chem.Commun.(Camb.), 56, 2020
6JWD
DownloadVisualize
BU of 6jwd by Molmil
structure of RET G-quadruplex in complex with berberine
Descriptor: BERBERINE, DNA (5'-D(*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*GP*GP*GP*GP*T)-3')
Authors:Wang, F, Wang, C, Liu, Y, Lan, W.X, Li, Y.M, Wang, R.X, Cao, C.
Deposit date:2019-04-19
Release date:2020-04-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Colchicine selective interaction with oncogene RET G-quadruplex revealed by NMR.
Chem.Commun.(Camb.), 56, 2020
3C2G
DownloadVisualize
BU of 3c2g by Molmil
Crystal complex of SYS-1/POP-1 at 2.5A resolution
Descriptor: Pop-1 8-residue peptide, Sys-1 protein
Authors:Liu, J, Phillips, B.T, Amaya, M.F, Kimble, J, Xu, W.
Deposit date:2008-01-24
Release date:2008-05-20
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The C. elegans SYS-1 protein is a bona fide beta-catenin.
Dev.Cell, 14, 2008
6JGX
DownloadVisualize
BU of 6jgx by Molmil
Crystal structure of the transcriptional regulator CadR from P. putida in complex with Cadmium(II) and DNA
Descriptor: CADMIUM ION, CadR, DNA (5'-D(*CP*AP*CP*CP*CP*TP*AP*TP*AP*GP*TP*GP*GP*CP*TP*AP*CP*AP*GP*GP*GP*T)-3'), ...
Authors:Liu, X.C, Gan, J.H, Chen, H.
Deposit date:2019-02-15
Release date:2019-09-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Selective cadmium regulation mediated by a cooperative binding mechanism in CadR.
Proc.Natl.Acad.Sci.USA, 116, 2019

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon