Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2F6A
DownloadVisualize
BU of 2f6a by Molmil
Collagen Adhesin and Collagen Complex Structure
Descriptor: Collagen, Collagen adhesin
Authors:Zong, Y, Narayana, S.L.V.
Deposit date:2005-11-28
Release date:2006-12-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.29 Å)
Cite:A 'Collagen Hug' model for Staphylococcus aureus CNA binding to collagen.
Embo J., 24, 2005
2F68
DownloadVisualize
BU of 2f68 by Molmil
Crystal structure of collagen adhesin (CNA) from S. aureus
Descriptor: Collagen adhesin
Authors:Zong, Y, Narayana, S.V.L.
Deposit date:2005-11-28
Release date:2006-12-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A 'Collagen Hug' model for Staphylococcus aureus CNA binding to collagen.
Embo J., 24, 2005
3V64
DownloadVisualize
BU of 3v64 by Molmil
Crystal Structure of agrin and LRP4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Low-density lipoprotein receptor-related protein 4, ...
Authors:Zong, Y, Zhang, B, Gu, S, Lee, K, Zhou, J, Yao, G, Figueiedo, D, Perry, K, Mei, L, Jin, R.
Deposit date:2011-12-18
Release date:2012-04-25
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural basis of agrin-LRP4-MuSK signaling.
Genes Dev., 26, 2012
3V65
DownloadVisualize
BU of 3v65 by Molmil
Crystal structure of agrin and LRP4 complex
Descriptor: Agrin, CALCIUM ION, Low-density lipoprotein receptor-related protein 4
Authors:Zong, Y, Jin, R.
Deposit date:2011-12-18
Release date:2012-04-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural basis of agrin-LRP4-MuSK signaling.
Genes Dev., 26, 2012
1QX6
DownloadVisualize
BU of 1qx6 by Molmil
Crystal structure of Sortase B complexed with E-64
Descriptor: N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE, NPQTN specific sortase B
Authors:Zong, Y, Mazmanian, S.K, Schneewind, O, Narayana, S.V.
Deposit date:2003-09-04
Release date:2004-04-06
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The structure of sortase B, a cysteine transpeptidase that tethers surface protein to the Staphylococcus aureus cell wall
Structure, 12, 2004
1QXA
DownloadVisualize
BU of 1qxa by Molmil
Crystal structure of Sortase B complexed with Gly3
Descriptor: 2-(TRIMETHYLAMMONIUM)ETHYL THIOL, NPQTN specific sortase B, peptide GLY-GLY-GLY
Authors:Zong, Y, Mazmanian, S.K, Schneewind, O, Narayana, S.V.
Deposit date:2003-09-05
Release date:2004-04-06
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The structure of sortase B, a cysteine transpeptidase that tethers surface protein to the Staphylococcus aureus cell wall
Structure, 12, 2004
1T2W
DownloadVisualize
BU of 1t2w by Molmil
Crystal Structure of Sortase A in Complex with a LPETG peptide
Descriptor: Class A sortase SrtA, Peptide LEU-PRO-GLU-THR-GLY
Authors:Zong, Y, Bice, T.W, Ton-That, H, Schneewind, O, Narayana, S.V.
Deposit date:2004-04-23
Release date:2004-09-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of Staphylococcus aureus sortase A and its substrate complex
J.Biol.Chem., 279, 2004
1QWZ
DownloadVisualize
BU of 1qwz by Molmil
Crystal structure of Sortase B from S. aureus complexed with MTSET
Descriptor: 2-(TRIMETHYLAMMONIUM)ETHYL THIOL, NICKEL (II) ION, NPQTN specific sortase B, ...
Authors:Zong, Y, Mazmanian, S.K, Schneewind, O, Narayana, S.V.
Deposit date:2003-09-03
Release date:2004-04-06
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The structure of sortase B, a cysteine transpeptidase that tethers surface protein to the Staphylococcus aureus cell wall
Structure, 12, 2004
1T2O
DownloadVisualize
BU of 1t2o by Molmil
Crystal structure of Se-SrtA, C184-Ala
Descriptor: sortase
Authors:Zong, Y, Bice, T.W, Ton-That, H, Schneewind, O, Narayana, S.V.
Deposit date:2004-04-22
Release date:2004-09-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of Staphylococcus aureus sortase A and its substrate complex
J.Biol.Chem., 279, 2004
1T2P
DownloadVisualize
BU of 1t2p by Molmil
Crystal structure of Sortase A from Staphylococcus aureus
Descriptor: sortase
Authors:Zong, Y, Bice, T.W, Ton-That, H, Schneewind, O, Narayana, S.V.
Deposit date:2004-04-22
Release date:2004-09-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:CRYSTAL STRUCTURES OF STAPHYLOCOCCUS AUREUS SORTASE A AND ITS SUBSTRATE COMPLEX
J.Biol.Chem., 279, 2004
3OBR
DownloadVisualize
BU of 3obr by Molmil
Crystal structure of Botulinum neurotoxin serotype D binding domain
Descriptor: Botulinum neurotoxin type D, GLYCEROL
Authors:Zong, Y, Lee, K.K, Jin, R.
Deposit date:2010-08-09
Release date:2010-09-08
Last modified:2014-04-16
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Botulinum neurotoxin serotype D attacks neurons via two carbohydrate-binding sites in a ganglioside-dependent manner.
Biochem.J., 431, 2010
3SAJ
DownloadVisualize
BU of 3saj by Molmil
Crystal Structure of glutamate receptor GluA1 Amino Terminal Domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glutamate receptor 1, ...
Authors:Jin, R, Zong, Y, Yao, G, Gu, S.
Deposit date:2011-06-02
Release date:2011-06-22
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the glutamate receptor GluA1 N-terminal domain.
Biochem.J., 438, 2011
5E85
DownloadVisualize
BU of 5e85 by Molmil
isolated SBD of BiP
Descriptor: 78 kDa glucose-regulated protein, SULFATE ION
Authors:Liu, Q, Yang, J, Nune, M, Zong, Y, Zhou, L.
Deposit date:2015-10-13
Release date:2015-12-30
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Close and Allosteric Opening of the Polypeptide-Binding Site in a Human Hsp70 Chaperone BiP.
Structure, 23, 2015
5E86
DownloadVisualize
BU of 5e86 by Molmil
isolated SBD of BiP with loop34 modification
Descriptor: 78 kDa glucose-regulated protein
Authors:Liu, Q, Yang, J, Nune, M, Zong, Y, Zhou, L.
Deposit date:2015-10-13
Release date:2015-12-30
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.681 Å)
Cite:Close and Allosteric Opening of the Polypeptide-Binding Site in a Human Hsp70 Chaperone BiP.
Structure, 23, 2015
5E84
DownloadVisualize
BU of 5e84 by Molmil
ATP-bound state of BiP
Descriptor: 78 kDa glucose-regulated protein, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Liu, Q, Yang, J, Nune, M, Zong, Y, Zhou, L.
Deposit date:2015-10-13
Release date:2016-01-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Close and Allosteric Opening of the Polypeptide-Binding Site in a Human Hsp70 Chaperone BiP.
Structure, 23, 2015
3OBT
DownloadVisualize
BU of 3obt by Molmil
Crystal structure of Botulinum neurotoxin serotype D ligand binding domain in complex with N-Acetylneuraminic acid
Descriptor: Botulinum neurotoxin type D, GLYCEROL, N-acetyl-beta-neuraminic acid
Authors:Lee, K.K, Zong, Y, Jin, R.
Deposit date:2010-08-09
Release date:2010-09-08
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Botulinum neurotoxin serotype D attacks neurons via two carbohydrate-binding sites in a ganglioside-dependent manner.
Biochem.J., 431, 2010
6ASY
DownloadVisualize
BU of 6asy by Molmil
BiP-ATP2
Descriptor: 78 kDa glucose-regulated protein, ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, ...
Authors:Liu, Q, Yang, J, Zong, Y, Columbus, L, Zhou, L.
Deposit date:2017-08-26
Release date:2017-12-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Conformation transitions of the polypeptide-binding pocket support an active substrate release from Hsp70s.
Nat Commun, 8, 2017
7WB2
DownloadVisualize
BU of 7wb2 by Molmil
Oxidase ChaP-D49L/Y109F mutant
Descriptor: ChaP, FE (III) ION
Authors:Zong, Y, Zheng, W, Wang, Y, Zhu, J, Tan, R.
Deposit date:2021-12-15
Release date:2022-05-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Alteration of the Catalytic Reaction Trajectory of a Vicinal Oxygen Chelate Enzyme by Directed Evolution.
Angew.Chem.Int.Ed.Engl., 61, 2022
3QNQ
DownloadVisualize
BU of 3qnq by Molmil
Crystal structure of the transporter ChbC, the IIC component from the N,N'-diacetylchitobiose-specific phosphotransferase system
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CITRIC ACID, PTS system, ...
Authors:Cao, Y, Jin, X, Huang, H, Levin, E.J, Zhou, M, New York Consortium on Membrane Protein Structure (NYCOMPS)
Deposit date:2011-02-08
Release date:2011-04-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.295 Å)
Cite:Crystal structure of a phosphorylation-coupled saccharide transporter.
Nature, 473, 2011
7F03
DownloadVisualize
BU of 7f03 by Molmil
Cytochrome c-type biogenesis protein CcmABCD from E. coli in complex with ANP
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, Cytochrome c biogenesis ATP-binding export protein CcmA, Heme exporter protein B, ...
Authors:Li, J, Zheng, W, Gu, M, Zhang, K, Zhu, J.P.
Deposit date:2021-06-03
Release date:2022-11-09
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:Structures of the CcmABCD heme release complex at multiple states.
Nat Commun, 13, 2022
7F04
DownloadVisualize
BU of 7f04 by Molmil
Cytochrome c-type biogenesis protein CcmABCD from E. coli in complex with Heme and ATP.
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, ADENOSINE-5'-TRIPHOSPHATE, Cytochrome c biogenesis ATP-binding export protein CcmA, ...
Authors:Li, J, Zheng, W, Gu, M, Zhang, K, Zhu, J.P.
Deposit date:2021-06-03
Release date:2022-11-09
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:Structures of the CcmABCD heme release complex at multiple states.
Nat Commun, 13, 2022
7F02
DownloadVisualize
BU of 7f02 by Molmil
Cytochrome c-type biogenesis protein CcmABCD from E. coli
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, Cytochrome c biogenesis ATP-binding export protein CcmA, Heme exporter protein B, ...
Authors:Li, J, Zheng, W, Gu, M, Zhang, K, Zhu, J.P.
Deposit date:2021-06-03
Release date:2022-11-09
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:Structures of the CcmABCD heme release complex at multiple states.
Nat Commun, 13, 2022
7XHQ
DownloadVisualize
BU of 7xhq by Molmil
Small-molecule Allosteric Regulation Mechanism of SHP2
Descriptor: 2-[(3S,4R)-4-azanyl-3-methyl-2-oxa-8-azaspiro[4.5]decan-8-yl]-5-[2,3-bis(chloranyl)phenyl]-3-methyl-pyrrolo[2,1-f][1,2,4]triazin-4-one, Tyrosine-protein phosphatase non-receptor type 11
Authors:Luo, Y, Zhu, J, Yu, K, Liu, B.
Deposit date:2022-04-09
Release date:2023-02-15
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Discovery of the SHP2 allosteric inhibitor 2-((3R,4R)-4-amino-3-methyl-2-oxa-8-azaspiro[4.5]decan-8-yl)-5-(2,3-dichlorophenyl)-3-methylpyrrolo[2,1-f][1,2,4] triazin-4(3H)-one.
J Enzyme Inhib Med Chem, 38, 2023
7VFJ
DownloadVisualize
BU of 7vfj by Molmil
Cytochrome c-type biogenesis protein CcmABCD
Descriptor: Cytochrome c biogenesis ATP-binding export protein CcmA, Heme exporter protein B, Heme exporter protein C, ...
Authors:Zhu, J.P, Zhang, K, Li, J, Zheng, W, Gu, M.
Deposit date:2021-09-13
Release date:2022-11-09
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.98 Å)
Cite:Structures of the CcmABCD heme release complex at multiple states.
Nat Commun, 13, 2022
7VFP
DownloadVisualize
BU of 7vfp by Molmil
Cytochrome c-type biogenesis protein CcmABCD from E. coli in complex with heme and single ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cytochrome c biogenesis ATP-binding export protein CcmA, Heme exporter protein B, ...
Authors:Li, J, Zheng, W, Gu, M, Zhang, K, Zhu, J.P.
Deposit date:2021-09-13
Release date:2022-11-09
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (4.03 Å)
Cite:Structures of the CcmABCD heme release complex at multiple states.
Nat Commun, 13, 2022

227111

數據於2024-11-06公開中

PDB statisticsPDBj update infoContact PDBjnumon