1T2W

Crystal Structure of Sortase A in Complex with a LPETG peptide

Summary for 1T2W

• Entry DOI: 10.2210/pdb1t2w/pdb
• Related: 1T20 1T2P
• Descriptor: Class A sortase SrtA, Peptide LEU-PRO-GLU-THR-GLY (3 entities in total)
• Functional Keywords: sortase, transpeptidase, beta barrel, hydrolase
• Biological source: Staphylococcus aureus; More
• Total number of polymer chains: 4
• Total formula weight: 49687.15

Authors

Zong, Y.,Bice, T.W.,Ton-That, H.,Schneewind, O.,Narayana, S.V. (deposition date: 2004-04-23, release date: 2004-09-07, Last modification date: 2023-08-23)

Primary citation

Zong, Y.,Bice, T.W.,Ton-That, H.,Schneewind, O.,Narayana, S.V.
Crystal structure of Staphylococcus aureus sortase A and its substrate complex
J.Biol.Chem., 279:31383-31389, 2004

PubMed Abstract: The cell wall envelope of staphylococci and other Gram-positive pathogens is coated with surface proteins that interact with human host tissues. Surface proteins of Staphylococcus aureus are covalently linked to the cell wall envelope by a mechanism requiring C-terminal sorting signals with an LPXTG motif. Sortase (SrtA) cleaves surface proteins between the threonine (T) and the glycine (G) of the LPXTG motif and catalyzes the formation of an amide bond between threonine at the C-terminal end of polypeptides and cell wall cross-bridges. The active site architecture and catalytic mechanism of sortase A has hitherto not been revealed. Here we present the crystal structures of native SrtA, of an active site mutant of SrtA, and of the mutant SrtA complexed with its substrate LPETG peptide and describe the substrate binding pocket of the enzyme. Highly conserved proline (P) and threonine (T) residues of the LPXTG motif are held in position by hydrophobic contacts, whereas the glutamic acid residue (E) at the X position points out into the solvent. The scissile T-G peptide bond is positioned between the active site Cys(184) and Arg(197) residues and at a greater distance from the imidazolium side chain of His(120). All three residues, His(120), Cys(184), and Arg(197), are conserved in sortase enzymes from Gram-positive bacteria. Comparison of the active sites of S. aureus sortase A and sortase B provides insight into substrate specificity and suggests a universal sortase-catalyzed mechanism of bacterial surface protein anchoring in Gram-positive bacteria.

PubMed: 15117963
DOI: 10.1074/jbc.M401374200

Experimental method

X-RAY DIFFRACTION (1.8 Å)