1MCP
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![BU of 1mcp by Molmil](/molmil-images/mine/1mcp) | PHOSPHOCHOLINE BINDING IMMUNOGLOBULIN FAB MC/PC603. AN X-RAY DIFFRACTION STUDY AT 2.7 ANGSTROMS | Descriptor: | IGA-KAPPA MCPC603 FAB (HEAVY CHAIN), IGA-KAPPA MCPC603 FAB (LIGHT CHAIN), SULFATE ION | Authors: | Satow, Y, Cohen, G.H, Padlan, E.A, Davies, D.R. | Deposit date: | 1984-07-09 | Release date: | 1985-01-02 | Last modified: | 2023-07-26 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Phosphocholine binding immunoglobulin Fab McPC603. An X-ray diffraction study at 2.7 A. J.Mol.Biol., 190, 1986
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1KEG
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![BU of 1keg by Molmil](/molmil-images/mine/1keg) | Antibody 64M-2 Fab complexed with dTT(6-4)TT | Descriptor: | 5'-D(*TP*(64T)P*TP*T)-3', Anti-(6-4) photoproduct antibody 64M-2 Fab (heavy chain), Anti-(6-4) photoproduct antibody 64M-2 Fab (light chain), ... | Authors: | Yokoyama, H, Mizutani, R, Satow, Y, Sato, K, Komatsu, Y, Ohtsuka, E, Nikaido, O. | Deposit date: | 2001-11-15 | Release date: | 2002-11-15 | Last modified: | 2023-08-16 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Structure of the DNA (6-4) photoproduct dTT(6-4)TT in complex with the 64M-2 antibody Fab fragment implies increased antibody-binding affinity by the flanking nucleotides. Acta Crystallogr.,Sect.D, 68, 2012
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1UM2
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1UJ3
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![BU of 1uj3 by Molmil](/molmil-images/mine/1uj3) | Crystal structure of a humanized Fab fragment of anti-tissue-factor antibody in complex with tissue factor | Descriptor: | IgG Fab heavy chain, IgG Fab light chain, tissue factor | Authors: | Ohto, U, Mizutani, R, Nakamura, M, Adachi, H, Satow, Y. | Deposit date: | 2003-07-25 | Release date: | 2004-07-25 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Crystal structure of a humanized Fab fragment of anti-tissue-factor antibody in complex with tissue factor. J.Synchrotron Radiat., 11, 2004
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2E59
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![BU of 2e59 by Molmil](/molmil-images/mine/2e59) | Crystal structure of human MD-2 in complex with lipid IVa | Descriptor: | (R)-((2R,3S,4R,5R,6R)-3-HYDROXY-2-(HYDROXYMETHYL)-5-((R)-3-HYDROXYTETRADECANAMIDO)-6-(PHOSPHONOOXY)TETRAHYDRO-2H-PYRAN-4-YL) 3-HYDROXYTETRADECANOATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-deoxy-3-O-[(3R)-3-hydroxytetradecanoyl]-2-{[(3R)-3-hydroxytetradecanoyl]amino}-4-O-phosphono-beta-D-glucopyranose, ... | Authors: | Ohto, U, Satow, Y. | Deposit date: | 2006-12-19 | Release date: | 2007-06-26 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.21 Å) | Cite: | Crystal structures of human MD-2 and its complex with antiendotoxic lipid IVa Science, 316, 2007
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3AK8
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![BU of 3ak8 by Molmil](/molmil-images/mine/3ak8) | Crystal structure of the SEp22 dodecamer, a Dps-like protein from Salmonella enterica subsp. enterica serovar Enteritidis | Descriptor: | DNA protection during starvation protein, MAGNESIUM ION, SULFATE ION | Authors: | Miyamoto, T, Asahina, Y, Miyazaki, S, Shimizu, H, Ohto, U, Noguchi, S, Satow, Y. | Deposit date: | 2010-07-08 | Release date: | 2011-01-12 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.25 Å) | Cite: | Structures of the SEp22 dodecamer, a Dps-like protein from Salmonella enterica subsp. enterica serovar Enteritidis Acta Crystallogr.,Sect.F, 67, 2011
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1ITQ
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![BU of 1itq by Molmil](/molmil-images/mine/1itq) | HUMAN RENAL DIPEPTIDASE | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, RENAL DIPEPTIDASE, ZINC ION | Authors: | Nitanai, Y, Satow, Y, Adachi, H, Tsujimoto, M. | Deposit date: | 2002-02-02 | Release date: | 2002-08-28 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Crystal Structure of Human Renal Dipeptidase Involved in beta-Lactam Hydrolysis J.Mol.Biol., 321, 2002
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1ITU
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![BU of 1itu by Molmil](/molmil-images/mine/1itu) | HUMAN RENAL DIPEPTIDASE COMPLEXED WITH CILASTATIN | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, CILASTATIN, RENAL DIPEPTIDASE, ... | Authors: | Nitanai, Y, Satow, Y, Adachi, H, Tsujimoto, M. | Deposit date: | 2002-02-03 | Release date: | 2002-08-28 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Crystal Structure of Human Renal Dipeptidase Involved in beta-Lactam Hydrolysis J.Mol.Biol., 321, 2002
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1AT6
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![BU of 1at6 by Molmil](/molmil-images/mine/1at6) | HEN EGG WHITE LYSOZYME WITH A ISOASPARTATE RESIDUE | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, LYSOZYME | Authors: | Noguchi, S, Miyawaki, K, Satow, Y. | Deposit date: | 1997-08-19 | Release date: | 1998-02-25 | Last modified: | 2023-08-02 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Succinimide and isoaspartate residues in the crystal structures of hen egg-white lysozyme complexed with tri-N-acetylchitotriose. J.Mol.Biol., 278, 1998
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1AT5
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![BU of 1at5 by Molmil](/molmil-images/mine/1at5) | HEN EGG WHITE LYSOZYME WITH A SUCCINIMIDE RESIDUE | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, LYSOZYME, ... | Authors: | Noguchi, S, Miyawaki, K, Satow, Y. | Deposit date: | 1997-08-18 | Release date: | 1998-02-25 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Succinimide and isoaspartate residues in the crystal structures of hen egg-white lysozyme complexed with tri-N-acetylchitotriose. J.Mol.Biol., 278, 1998
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3M7O
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![BU of 3m7o by Molmil](/molmil-images/mine/3m7o) | Crystal structure of mouse MD-1 in complex with phosphatidylcholine | Descriptor: | (2S)-3-(octadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, BENZAMIDINE, ... | Authors: | Harada, H, Ohto, U, Satow, Y. | Deposit date: | 2010-03-17 | Release date: | 2010-06-09 | Last modified: | 2020-07-29 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | Crystal structure of mouse MD-1 with endogenous phospholipid bound in its cavity J.Mol.Biol., 400, 2010
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1A0F
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![BU of 1a0f by Molmil](/molmil-images/mine/1a0f) | CRYSTAL STRUCTURE OF GLUTATHIONE S-TRANSFERASE FROM ESCHERICHIA COLI COMPLEXED WITH GLUTATHIONESULFONIC ACID | Descriptor: | GLUTATHIONE S-TRANSFERASE, GLUTATHIONE SULFONIC ACID | Authors: | Nishida, M, Harada, S, Noguchi, S, Inoue, H, Takahashi, K, Satow, Y. | Deposit date: | 1997-11-29 | Release date: | 1999-01-13 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Three-dimensional structure of Escherichia coli glutathione S-transferase complexed with glutathione sulfonate: catalytic roles of Cys10 and His106. J.Mol.Biol., 281, 1998
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1NGP
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1NGQ
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![BU of 1ngq by Molmil](/molmil-images/mine/1ngq) | N1G9 (IGG1-LAMBDA) FAB FRAGMENT | Descriptor: | N1G9 (IGG1-LAMBDA), SULFATE ION | Authors: | Mizutani, R, Satow, Y. | Deposit date: | 1995-06-23 | Release date: | 1996-07-11 | Last modified: | 2018-04-04 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Three-dimensional structures of the Fab fragment of murine N1G9 antibody from the primary immune response and of its complex with (4-hydroxy-3-nitrophenyl)acetate. J.Mol.Biol., 254, 1995
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1EHL
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![BU of 1ehl by Molmil](/molmil-images/mine/1ehl) | 64M-2 ANTIBODY FAB COMPLEXED WITH D(5HT)(6-4)T | Descriptor: | 5'-(D(5HT)P*(6-4)T)-3', ANTI-(6-4) PHOTOPRODUCT ANTIBODY 64M-2 FAB (HEAVY CHAIN), ANTI-(6-4) PHOTOPRODUCT ANTIBODY 64M-2 FAB (LIGHT CHAIN) | Authors: | Yokoyama, H, Mizutani, R, Satow, Y, Komatsu, Y, Ohtsuka, E, Nikaido, O. | Deposit date: | 2000-02-21 | Release date: | 2001-02-21 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Crystal structure of the 64M-2 antibody Fab fragment in complex with a DNA dT(6-4)T photoproduct formed by ultraviolet radiation. J.Mol.Biol., 299, 2000
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3VW3
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![BU of 3vw3 by Molmil](/molmil-images/mine/3vw3) | Antibody 64M-5 Fab in complex with a double-stranded DNA (6-4) photoproduct | Descriptor: | Anti-(6-4) photoproduct antibody 64M-5 Fab (heavy chain), Anti-(6-4) photoproduct antibody 64M-5 Fab (light chain), COBALT HEXAMMINE(III), ... | Authors: | Yokoyama, H, Mizutani, R, Satow, Y. | Deposit date: | 2012-07-30 | Release date: | 2013-03-27 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Structure of a double-stranded DNA (6-4) photoproduct in complex with the 64M-5 antibody Fab Acta Crystallogr.,Sect.D, 69, 2013
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1JVA
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2E56
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![BU of 2e56 by Molmil](/molmil-images/mine/2e56) | Crystal structure of human MD-2 | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Lymphocyte antigen 96, MYRISTIC ACID | Authors: | Ohto, U, Satow, Y. | Deposit date: | 2006-12-19 | Release date: | 2007-06-26 | Last modified: | 2020-07-29 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Crystal structures of human MD-2 and its complex with antiendotoxic lipid IVa. Science, 316, 2007
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3AK9
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![BU of 3ak9 by Molmil](/molmil-images/mine/3ak9) | Crystal structure of the SEp22 dodecamer, a Dps-like protein from Salmonella enterica subsp. enterica serovar Enteritidis, FE-soaked form | Descriptor: | DNA protection during starvation protein, FE (II) ION, MAGNESIUM ION, ... | Authors: | Miyamoto, T, Asahina, Y, Miyazaki, S, Shimizu, H, Ohto, U, Noguchi, S, Satow, Y. | Deposit date: | 2010-07-08 | Release date: | 2011-01-12 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.3 Å) | Cite: | Structures of the SEp22 dodecamer, a Dps-like protein from Salmonella enterica subsp. enterica serovar Enteritidis Acta Crystallogr.,Sect.F, 67, 2011
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1RTU
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![BU of 1rtu by Molmil](/molmil-images/mine/1rtu) | USTILAGO SPHAEROGENA RIBONUCLEASE U2 | Descriptor: | RIBONUCLEASE U2, SULFATE ION | Authors: | Noguchi, S, Satow, Y, Uchida, T, Sasaki, C, Matsuzaki, T. | Deposit date: | 1995-05-12 | Release date: | 1996-11-08 | Last modified: | 2023-08-09 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Crystal structure of Ustilago sphaerogena ribonuclease U2 at 1.8 A resolution. Biochemistry, 34, 1995
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1RNH
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![BU of 1rnh by Molmil](/molmil-images/mine/1rnh) | STRUCTURE OF RIBONUCLEASE H PHASED AT 2 ANGSTROMS RESOLUTION BY MAD ANALYSIS OF THE SELENOMETHIONYL PROTEIN | Descriptor: | RIBONUCLEASE HI, SULFATE ION | Authors: | Yang, W, Hendrickson, W.A, Crouch, R.J, Satow, Y. | Deposit date: | 1990-07-11 | Release date: | 1991-10-15 | Last modified: | 2024-06-05 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Structure of ribonuclease H phased at 2 A resolution by MAD analysis of the selenomethionyl protein. Science, 249, 1990
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3AGX
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3AGY
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3AGZ
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3W68
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![BU of 3w68 by Molmil](/molmil-images/mine/3w68) | Crystal structure of mouse alpha-tocopherol transfer protein in complex with alpha-tocopherol and phosphatidylinositol-(4,5)-bisphosphate | Descriptor: | (2R)-2,5,7,8-TETRAMETHYL-2-[(4R,8R)-4,8,12-TRIMETHYLTRIDECYL]CHROMAN-6-OL, (2R)-3-{[(R)-HYDROXY{[(1R,2R,3S,4R,5R,6S)-2,3,6-TRIHYDROXY-4,5-BIS(PHOSPHONOOXY)CYCLOHEXYL]OXY}PHOSPHORYL]OXY}PROPANE-1 ,2-DIYL DIBUTANOATE, (2R)-3-{[(S)-{[(2S,3R,5S,6S)-2,6-DIHYDROXY-3,4,5-TRIS(PHOSPHONOOXY)CYCLOHEXYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-(1-HYDROXY BUTOXY)PROPYL BUTYRATE, ... | Authors: | Ohto, U, Satow, Y. | Deposit date: | 2013-02-11 | Release date: | 2013-05-01 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.05 Å) | Cite: | Impaired alpha-TTP-PIPs interaction underlies familial vitamin E deficiency Science, 340, 2013
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