Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3CWD
DownloadVisualize
BU of 3cwd by Molmil
Molecular recognition of nitro-fatty acids by PPAR gamma
Descriptor: (9E,12Z)-10-nitrooctadeca-9,12-dienoic acid, (9Z,12E)-12-nitrooctadeca-9,12-dienoic acid, Peroxisome proliferator-activated receptor gamma, ...
Authors:Martynowski, D, Li, Y.
Deposit date:2008-04-21
Release date:2008-07-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular recognition of nitrated fatty acids by PPAR gamma.
Nat.Struct.Mol.Biol., 15, 2008
7XC3
DownloadVisualize
BU of 7xc3 by Molmil
Crystal structure of SARS-CoV-2 NSP3 Macrodomain 3 (SARS-unique domain-M)
Descriptor: Papain-like protease nsp3
Authors:Li, J, Gao, J.
Deposit date:2022-03-22
Release date:2022-11-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Two Binding Sites of SARS-CoV-2 Macrodomain 3 Probed by Oxaprozin and Meclomen.
J.Med.Chem., 65, 2022
7XC4
DownloadVisualize
BU of 7xc4 by Molmil
Crystal structure of SARS-CoV-2 NSP3 Macrodomain 3 (SARS-unique domain-M) in complex with Oxaprozin
Descriptor: 3-(4,5-diphenyl-1,3-oxazol-2-yl)propanoic acid, Papain-like protease nsp3
Authors:Li, J, Liu, Y, Gao, J, Ruan, K.
Deposit date:2022-03-22
Release date:2022-11-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Two Binding Sites of SARS-CoV-2 Macrodomain 3 Probed by Oxaprozin and Meclomen.
J.Med.Chem., 65, 2022
3DXF
DownloadVisualize
BU of 3dxf by Molmil
Crystal structure of the HSCARG R37A mutant
Descriptor: NmrA-like family domain-containing protein 1
Authors:Li, Y, Meng, G, Dai, X, Luo, M, Zheng, X.
Deposit date:2008-07-24
Release date:2009-05-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:NADPH is an allosteric regulator of HSCARG
J.Mol.Biol., 387, 2009
4ORD
DownloadVisualize
BU of 4ord by Molmil
Crystal Structure of Zebra Fish Thioesterase Superfamily Member 2
Descriptor: Thioesterase Superfamily Member 2
Authors:Yu, S.S, Li, H, Gao, F, Xu, H, Gong, W.M.
Deposit date:2014-02-11
Release date:2015-02-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure and Potential Physiological Role of Zebra Fish Thioesterase Superfamily Member 2 (fTHEM2)
To be Published
7WOI
DownloadVisualize
BU of 7woi by Molmil
Structure of the shaft pilin Spa2 from Corynebacterium glutamicum
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Spa2
Authors:Wu, Y.F, Wang, L.T, Huang, Y.Y, Zhong, C, Zhou, J.
Deposit date:2022-01-21
Release date:2023-01-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Accelerating the design of pili-enabled living materials using an integrative technological workflow.
Nat.Chem.Biol., 2023
6CNA
DownloadVisualize
BU of 6cna by Molmil
GluN1-GluN2B NMDA receptors with exon 5
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glutamate receptor ionotropic, ...
Authors:Furukawa, H, Grant, T, Grigorieff, N.
Deposit date:2018-03-07
Release date:2018-10-03
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Structural Mechanism of Functional Modulation by Gene Splicing in NMDA Receptors.
Neuron, 98, 2018
7X31
DownloadVisualize
BU of 7x31 by Molmil
solution structure of an anti-CRISPR protein
Descriptor: Anti-CRISPR protein (AcrIIC1)
Authors:Zhao, Y, Yang, F.
Deposit date:2022-02-27
Release date:2022-10-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A redox switch regulates the assembly and anti-CRISPR activity of AcrIIC1.
Nat Commun, 13, 2022
4QVC
DownloadVisualize
BU of 4qvc by Molmil
E.coli Hfq in complex with RNA Aus
Descriptor: RNA (5'-R(*AP*U*AP*AP*CP*UP*A)-3'), RNA-binding protein Hfq
Authors:Wang, L.J, Wang, W.W, Li, F.D, Wu, J.H, Gong, Q.G, Shi, Y.Y.
Deposit date:2014-07-14
Release date:2015-05-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural insights into the recognition of the internal A-rich linker from OxyS sRNA by Escherichia coli Hfq
Nucleic Acids Res., 43, 2015
7X8X
DownloadVisualize
BU of 7x8x by Molmil
structural insights into Mycobacterium tuberculosis ClpP1P2 inhibition by Cediranib: implications for developing antimicrobial agents targeting Clp protease
Descriptor: 4-[1-[3-[4-[(4-fluoranyl-2-methyl-1H-indol-5-yl)oxy]-6-methoxy-quinazolin-7-yl]oxypropyl]piperidin-4-yl]benzamide, 4-[[3,5-bis(fluoranyl)phenyl]methyl]-N-[(4-bromophenyl)methyl]piperazine-1-carboxamide, ATP-dependent Clp protease proteolytic subunit 1, ...
Authors:Bao, R, Luo, Y.F, Zhu, Y.B, Yang, Y, Zhou, Y.Z.
Deposit date:2022-03-15
Release date:2023-04-12
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (3.24 Å)
Cite:Discovery and Mechanistic Study of Novel Mycobacterium tuberculosis ClpP1P2 Inhibitors
J.Med.Chem., 66, 2023
4RSE
DownloadVisualize
BU of 4rse by Molmil
Crystal structure of RPE65 in complex with MB-001 and palmitate
Descriptor: (1R)-3-amino-1-{3-[(2,6,6-trimethylcyclohex-1-en-1-yl)methoxy]phenyl}propan-1-ol, FE (II) ION, PALMITIC ACID, ...
Authors:Kiser, P.D, Shi, W, Palczewski, K.
Deposit date:2014-11-07
Release date:2015-04-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Catalytic mechanism of a retinoid isomerase essential for vertebrate vision.
Nat.Chem.Biol., 11, 2015
7FBD
DownloadVisualize
BU of 7fbd by Molmil
De novo design protein D53 with MBP tag
Descriptor: Maltodextrin-binding protein,De novo design protein D53
Authors:Bin, H.
Deposit date:2021-07-09
Release date:2021-12-22
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:A backbone-centred energy function of neural networks for protein design.
Nature, 602, 2022
7FBB
DownloadVisualize
BU of 7fbb by Molmil
De novo design protein D12 with MBP tag
Descriptor: Maltodextrin-binding protein,de novo designed protein D12
Authors:Bin, H.
Deposit date:2021-07-09
Release date:2021-12-22
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.307 Å)
Cite:A backbone-centred energy function of neural networks for protein design.
Nature, 602, 2022
7FBC
DownloadVisualize
BU of 7fbc by Molmil
De novo design protein D22 with MBP tag
Descriptor: Maltodextrin-binding protein,De novo design protein D22
Authors:Bin, H.
Deposit date:2021-07-09
Release date:2021-12-22
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A backbone-centred energy function of neural networks for protein design.
Nature, 602, 2022
2KOI
DownloadVisualize
BU of 2koi by Molmil
Refined solution structure of a cyanobacterial phytochrome GAF domain in the red light-absorbing ground state
Descriptor: PHYCOCYANOBILIN, Sensor protein
Authors:Cornilescu, C.C, Cornilescu, G, Ulijasz, A.T, Vierstra, R.D, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2009-09-22
Release date:2009-11-03
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structural basis for the photoconversion of a phytochrome to the activated Pfr form
Nature, 463, 2010
3GK7
DownloadVisualize
BU of 3gk7 by Molmil
Crystal structure of 4-hydroxybutyrate CoA-Transferase from Clostridium aminobutyricum
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-Hydroxybutyrate CoA-transferase, SPERMIDINE
Authors:Messerschmidt, A, Macieira, S, Velarde, M.
Deposit date:2009-03-10
Release date:2009-12-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of 4-hydroxybutyrate CoA-transferase from Clostridium aminobutyricum
Biol.Chem., 390, 2009
2GYT
DownloadVisualize
BU of 2gyt by Molmil
Solution structure of the SAM (sterile alpha motif) domain of DLC1 (deleted in liver cancer 1)
Descriptor: Deleted in liver cancer 1 protein, isoform 2
Authors:Yang, S.
Deposit date:2006-05-10
Release date:2007-04-24
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The SAM domain of the RhoGAP DLC1 binds EF1A1 to regulate cell migration
J.Cell.Sci., 122, 2009
2KV8
DownloadVisualize
BU of 2kv8 by Molmil
Solution structure ofRGS12 PDZ domain
Descriptor: Regulator of G-protein signaling 12
Authors:Lu, G, Ji, P, Huang, H.
Deposit date:2010-03-10
Release date:2011-03-02
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Determining the Molecular Basis for the pH-dependent Interaction between the PDZ of Human RGS12 and MEK2
To be Published
4RSC
DownloadVisualize
BU of 4rsc by Molmil
Crystal structure of RPE65 in complex with emixustat and palmitate
Descriptor: (1R)-3-amino-1-[3-(cyclohexylmethoxy)phenyl]propan-1-ol, FE (II) ION, PALMITIC ACID, ...
Authors:Kiser, P.D, Shi, W, Palczewski, K.
Deposit date:2014-11-07
Release date:2015-04-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Catalytic mechanism of a retinoid isomerase essential for vertebrate vision.
Nat.Chem.Biol., 11, 2015
3E5M
DownloadVisualize
BU of 3e5m by Molmil
Crystal structure of the HSCARG Y81A mutant
Descriptor: NmrA-like family domain-containing protein 1
Authors:Li, Y, Meng, G, Dai, X, Luo, M, Zheng, X.
Deposit date:2008-08-14
Release date:2009-05-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:NADPH is an allosteric regulator of HSCARG
J.Mol.Biol., 387, 2009
4OU5
DownloadVisualize
BU of 4ou5 by Molmil
Crystal structure of esterase rPPE mutant S159A/W187H
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Alpha/beta hydrolase fold-3 domain protein, DI(HYDROXYETHYL)ETHER
Authors:Dou, S, Kong, X.D, Ma, B.D, Xu, J.H, Zhou, J.H.
Deposit date:2014-02-15
Release date:2014-07-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Crystal structures of Pseudomonas putida esterase reveal the functional role of residues 187 and 287 in substrate binding and chiral recognition
Biochem.Biophys.Res.Commun., 446, 2014
2LB5
DownloadVisualize
BU of 2lb5 by Molmil
Refined Structural Basis for the Photoconversion of A Phytochrome to the Activated FAR-RED LIGHT-ABSORBING Form
Descriptor: PHYCOCYANOBILIN, Sensor histidine kinase
Authors:Cornilescu, C.C, Cornilescu, G, Ulijasz, A.T, Vierstra, R.D, Markley, J.L.
Deposit date:2011-03-23
Release date:2011-06-29
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural basis for the photoconversion of a phytochrome to the activated Pfr form.
Nature, 463, 2010
2LHR
DownloadVisualize
BU of 2lhr by Molmil
Solution structure of Staphylococcus aureus IsdH linker domain
Descriptor: Iron-regulated surface determinant protein H
Authors:Spirig, T, Clubb, R.T, Malmirchegini, G.R, Robson, S.A.
Deposit date:2011-08-12
Release date:2012-11-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Staphylococcus aureus Uses a Novel Multidomain Receptor to Break Apart Human Hemoglobin and Steal Its Heme.
J.Biol.Chem., 288, 2013
7VQ1
DownloadVisualize
BU of 7vq1 by Molmil
Structure of Apo-hsTRPM2 channel
Descriptor: Transient receptor potential cation channel subfamily M member 2
Authors:Yu, X.F, Xie, Y, Zhang, X.K, Ma, C, Guo, J.T, Yang, F, Yang, W.
Deposit date:2021-10-18
Release date:2021-12-22
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.76 Å)
Cite:Structural and functional basis of the selectivity filter as a gate in human TRPM2 channel.
Cell Rep, 37, 2021
7VQ2
DownloadVisualize
BU of 7vq2 by Molmil
Structure of Apo-hsTRPM2 channel TM domain
Descriptor: Transient receptor potential cation channel subfamily M member 2
Authors:Yu, X.F, Xie, Y, Zhang, X.K, Ma, C, Guo, J.T, Yang, F, Yang, W.
Deposit date:2021-10-18
Release date:2021-12-22
Method:ELECTRON MICROSCOPY (3.68 Å)
Cite:Structural and functional basis of the selectivity filter as a gate in human TRPM2 channel.
Cell Rep, 37, 2021

223790

數據於2024-08-14公開中

PDB statisticsPDBj update infoContact PDBjnumon