Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5X3O
DownloadVisualize
BU of 5x3o by Molmil
Crystal structure of p-DiUb-S65-COOH
Descriptor: D-ubiquitin, Polyubiquitin-B
Authors:Man, P, Shuai, G, Qian, Q, Lei, L.
Deposit date:2017-02-06
Release date:2017-04-12
Last modified:2022-02-09
Method:X-RAY DIFFRACTION (2.194 Å)
Cite:Structure of p-DiUb-S65-COOH at 2.19 Angstroms resolution.
To Be Published
1FUP
DownloadVisualize
BU of 1fup by Molmil
FUMARASE WITH BOUND PYROMELLITIC ACID
Descriptor: D-MALATE, FUMARASE C, PYROMELLITIC ACID
Authors:Weaver, T, Banaszak, L.
Deposit date:1996-08-29
Release date:1997-03-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystallographic studies of the catalytic and a second site in fumarase C from Escherichia coli.
Biochemistry, 35, 1996
1FWM
DownloadVisualize
BU of 1fwm by Molmil
Crystal structure of the thymidylate synthase R166Q mutant
Descriptor: 10-PROPARGYL-5,8-DIDEAZAFOLIC ACID, SULFATE ION, THYMIDYLATE SYNTHASE
Authors:Sotelo-Mundo, R.R, Changchien, L, Maley, F, Montfort, W.R.
Deposit date:2000-09-23
Release date:2003-11-11
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of thymidylate synthase mutant R166Q: Structural basis for the nearly complete loss of catalytic activity.
J.Biochem.Mol.Toxicol., 20, 2006
4CST
DownloadVisualize
BU of 4cst by Molmil
Crystal structure of FimH in complex with 3'-Chloro-4'-(alpha-D-mannopyranosyloxy)-biphenyl-4-carbonitrile
Descriptor: 3'-chloro-4'-(alpha-D-mannopyranosyloxy)biphenyl-4-carbonitrile, PROTEIN FIMH
Authors:Kleeb, S, Pang, L, Mayer, K, Sigl, A, Eris, D, Preston, R.C, Zihlmann, P, Abgottspon, D, Hutter, A, Scharenberg, M, Jian, X, Navarra, G, Rabbani, S, Smiesko, M, Luedin, N, Jakob, R.P, Schwardt, O, Maier, T, Sharpe, T, Ernst, B.
Deposit date:2014-03-10
Release date:2015-02-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Fimh Antagonists: Bioisosteres to Improve the in Vitro and in Vivo Pk/Pd Profile.
J.Med.Chem., 58, 2015
1FY8
DownloadVisualize
BU of 1fy8 by Molmil
CRYSTAL STRUCTURE OF THE DELTAILE16VAL17 RAT ANIONIC TRYPSINOGEN-BPTI COMPLEX
Descriptor: CALCIUM ION, PANCREATIC TRYPSIN INHIBITOR, SULFATE ION, ...
Authors:Pasternak, A, White, A, Jeffery, C.J, Ringe, D, Hedstrom, L.
Deposit date:2000-09-28
Release date:2000-11-08
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The energetic cost of induced fit catalysis: Crystal structures of trypsinogen mutants with enhanced activity and inhibitor affinity.
Protein Sci., 10, 2001
3U4R
DownloadVisualize
BU of 3u4r by Molmil
Novel HCV NS5B polymerase Inhibitors: Discovery of Indole C2 Acyl sulfonamides
Descriptor: 1-[(2-aminopyridin-4-yl)methyl]-5-chloro-N-({3-[(methylsulfonyl)amino]phenyl}sulfonyl)-3-(2-oxo-1,2-dihydropyridin-3-yl)-1H-indole-2-carboxamide, RNA-directed RNA polymerase
Authors:Anilkumar, G.N, Selyutin, O, Rosenblum, S.B, Zeng, Q, Jiang, Y, Chan, T.-Y, Pu, H, Wang, L, Bennett, F, Chen, K.X, Lesburg, C.A, Duca, J.S, Gavalas, S, Huang, Y, Pinto, P, Sannagrahi, M, Velazquez, F, Venkataraman, S, Vilbubhan, B, Agrawal, S, Ferrari, E, Jiang, C.-K, Huang, H.-C, Shih, N.-Y, Njoroge, F.G, Kozlowski, J.A.
Deposit date:2011-10-10
Release date:2011-12-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:II. Novel HCV NS5B polymerase inhibitors: Discovery of indole C2 acyl sulfonamides.
Bioorg.Med.Chem.Lett., 22, 2012
1FZG
DownloadVisualize
BU of 1fzg by Molmil
CRYSTAL STRUCTURE OF FRAGMENT D FROM HUMAN FIBRINOGEN WITH THE PEPTIDE LIGAND GLY-HIS-ARG-PRO-AMIDE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, FIBRINOGEN
Authors:Everse, S.J, Spraggon, G, Veerapandian, L, Doolittle, R.F.
Deposit date:1999-01-01
Release date:1999-06-08
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Conformational changes in fragments D and double-D from human fibrin(ogen) upon binding the peptide ligand Gly-His-Arg-Pro-amide.
Biochemistry, 38, 1999
1MZY
DownloadVisualize
BU of 1mzy by Molmil
Crystal Structure of Nitrite Reductase
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase, MAGNESIUM ION
Authors:Guo, H, Olesen, K, Xue, Y, Shapliegh, J, Sjolin, L.
Deposit date:2002-10-10
Release date:2004-09-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:The High resolution Crystal Structures of Nitrite Reductase and its mutant Met182Thr from Rhodobacter Sphaeroides Reveal a Gating Mechanism for the Electron Transfer to the Type 1 Copper Center
To be Published
3U9H
DownloadVisualize
BU of 3u9h by Molmil
Complex structure of human tankyrase 2 with nicotinamide
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, NICOTINAMIDE, ...
Authors:Narwal, M, Lehtio, L.
Deposit date:2011-10-19
Release date:2011-11-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis of selective inhibition of human tankyrases.
J.Med.Chem., 55, 2012
1G37
DownloadVisualize
BU of 1g37 by Molmil
CRYSTAL STRUCTURE OF HUMAN ALPHA-THROMBIN COMPLEXED WITH BCH-10556 AND EXOSITE-DIRECTED PEPTIDE
Descriptor: 3-(4-AMINO-CYCLOHEXYL)-2-HYDROXY-3-[(4-OXO-2-PHENYLMETHANESULFONYL-1,2,3,4-TETRAHYDRO-PYRROLO[1,2-A]PYRAZINE-6-CARBONYL)-AMINO]-PROPIONIC ACID BUTYL ESTER, ALPHA THROMBIN, THROMBIN NONAPEPTIDE INHIBITOR
Authors:Bachand, B, Tarazi, M, St-Denis, Y, Edmunds, J.J, Winocour, P.D, Leblond, L, Siddiqui, M.A.
Deposit date:2000-10-23
Release date:2001-04-21
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Potent and selective bicyclic lactam inhibitors of thrombin. Part 4: transition state inhibitors.
Bioorg.Med.Chem.Lett., 11, 2001
5XBW
DownloadVisualize
BU of 5xbw by Molmil
The structure of BrlR
Descriptor: Probable transcriptional regulator
Authors:Wang, F, Qing, H, Gu, L.
Deposit date:2017-03-21
Release date:2018-05-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.109 Å)
Cite:BrlR from Pseudomonas aeruginosa is a receptor for both cyclic di-GMP and pyocyanin.
Nat Commun, 9, 2018
4D2I
DownloadVisualize
BU of 4d2i by Molmil
Crystal structure of the HerA hexameric DNA translocase from Sulfolobus solfataricus bound to AMP-PNP
Descriptor: HERA, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Rzechorzek, N.J, Blackwood, J.K, Bray, S.M, Maman, J.D, Pellegrini, L, Robinson, N.P.
Deposit date:2014-05-09
Release date:2014-12-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.841 Å)
Cite:Structure of the Hexameric Hera ATPase Reveals a Mechanism of Translocation-Coupled DNA-End Processing in Archaea
Nat.Commun., 5, 2014
3TZY
DownloadVisualize
BU of 3tzy by Molmil
Crystal structure of a fragment containing the acyltransferase domain of Pks13 from Mycobacterium tuberculosis in the palmitoylated form at 2.2 A
Descriptor: 12-mer peptide, GLYCEROL, PALMITIC ACID, ...
Authors:Bergeret, F, Pedelacq, J.D, Mourey, L, Bon, C.
Deposit date:2011-09-28
Release date:2012-08-29
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Biochemical and structural study of the atypical acyltransferase domain from the mycobacterial polyketide synthase pks13
J.Biol.Chem., 287, 2012
3TIX
DownloadVisualize
BU of 3tix by Molmil
Crystal structure of the Chp1-Tas3 complex core
Descriptor: CHLORIDE ION, Chromo domain-containing protein 1, POTASSIUM ION, ...
Authors:Schalch, T, Joshua-Tor, L.
Deposit date:2011-08-22
Release date:2011-11-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.9001 Å)
Cite:The Chp1-Tas3 core is a multifunctional platform critical for gene silencing by RITS.
Nat.Struct.Mol.Biol., 18, 2011
4CWS
DownloadVisualize
BU of 4cws by Molmil
Human HSP90 alpha N-terminal domain in complex with an Aminotriazoloquinazoline inhibitor
Descriptor: 2-{[2-amino-5-(1,3-benzodioxol-5-ylmethyl)[1,2,4]triazolo[1,5-c]quinazolin-8-yl]amino}ethanol, HEAT SHOCK PROTEIN HSP 90-ALPHA
Authors:Casale, E, Amboldi, N, Brasca, G, Caronni, D, Colombo, N, Dalvit, C, Felder, E.R, Fogliatto, G, Isacchi, A, Mantegani, S, Polucci, P, Riceputi, L, Sola, F, Visco, C, Zuccotto, F, Casuscelli, F.
Deposit date:2014-04-03
Release date:2014-07-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Fragment-Based Hit Discovery and Structure-Based Optimization of Aminotriazoloquinazolines as Novel Hsp90 Inhibitors.
Bioorg.Med.Chem., 22, 2014
1E5N
DownloadVisualize
BU of 1e5n by Molmil
E246C mutant of P fluorescens subsp. cellulosa xylanase A in complex with xylopentaose
Descriptor: CALCIUM ION, ENDO-1,4-BETA-XYLANASE A, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
Authors:Lo Leggio, L, Jenkins, J.A, Harris, G.W, Pickersgill, R.W.
Deposit date:2000-07-27
Release date:2000-12-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:X-ray crystallographic study of xylopentaose binding to Pseudomonas fluorescens xylanase A.
Proteins, 41, 2000
4CWR
DownloadVisualize
BU of 4cwr by Molmil
Human HSP90 alpha N-terminal domain in complex with an Aminotriazoloquinazoline inhibitor
Descriptor: 5-(1,3-benzodioxol-5-ylmethyl)-10-fluoro[1,2,4]triazolo[1,5-c]quinazolin-2-amine, HEAT SHOCK PROTEIN HSP 90-ALPHA
Authors:Casale, E, Amboldi, N, Brasca, G, Caronni, D, Colombo, N, Dalvit, C, Felder, E.R, Fogliatto, G, Isacchi, A, Mantegani, S, Polucci, P, Riceputi, L, Sola, F, Visco, C, Zuccotto, F, Casuscelli, F.
Deposit date:2014-04-03
Release date:2014-07-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Fragment-Based Hit Discovery and Structure-Based Optimization of Aminotriazoloquinazolines as Novel Hsp90 Inhibitors.
Bioorg.Med.Chem., 22, 2014
3U19
DownloadVisualize
BU of 3u19 by Molmil
CRYSTAL STRUCTURE OF ACYLENZYME INTERMEDIATE OF DE NOVO DESIGNED CYSTEINE ESTERASE ECH13, Northeast Structural Genomics Consortium Target OR51
Descriptor: GLYCEROL, artificial protein OR51
Authors:Kuzin, A, Su, M, Seetharaman, J, Sahdev, S, Xiao, R, Kohan, E, Richter, F, Everett, J.K, Acton, T.B, Baker, D, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2011-09-29
Release date:2011-10-26
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:CRYSTAL STRUCTURE OF ACYLENZYME INTERMEDIATE OF DE NOVO DESIGNED CYSTEINE ESTERASE ECH13, Northeast Structural Genomics Consortium Target OR51
To be Published
3U1L
DownloadVisualize
BU of 3u1l by Molmil
Structure of the mRNA splicing complex component Cwc2
Descriptor: Pre-mRNA-splicing factor CWC2, ZINC ION
Authors:Lu, P, Lu, G, Yan, C, Wang, L, Li, W, Yin, P.
Deposit date:2011-09-30
Release date:2011-11-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structure of the mRNA splicing complex component Cwc2: insights into RNA recognition
Biochem.J., 441, 2012
5Y4S
DownloadVisualize
BU of 5y4s by Molmil
Structure of a methyltransferase complex
Descriptor: Chemotaxis protein methyltransferase 1
Authors:Yan, X, Xin, L, Tan, Y.J, Jin, S, Liang, Z.X, Gao, Y.G.
Deposit date:2017-08-04
Release date:2017-11-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.405 Å)
Cite:Structural analyses unravel the molecular mechanism of cyclic di-GMP regulation of bacterial chemotaxis via a PilZ adaptor protein.
J. Biol. Chem., 293, 2018
5Y2U
DownloadVisualize
BU of 5y2u by Molmil
X-ray structure of Phosphoglycerate Mutase 1(PGAM1) complexed with a small molecule
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ALIZARIN RED, CHLORIDE ION, ...
Authors:Jiang, L.L, Zhou, L.
Deposit date:2017-07-27
Release date:2018-08-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:X-ray structure of Phosphoglycerate Mutase 1(PGAM1) complexed with a small molecule
To Be Published
4CWF
DownloadVisualize
BU of 4cwf by Molmil
Human HSP90 alpha N-terminal domain in complex with an Aminotriazoloquinazoline inhibitor
Descriptor: 5-propyl[1,2,4]triazolo[1,5-c]quinazolin-2-amine, HEAT SHOCK PROTEIN HSP 90-ALPHA
Authors:Casale, E, Amboldi, N, Brasca, G, Caronni, D, Colombo, N, Dalvit, C, Felder, E.R, Fogliatto, G, Isacchi, A, Mantegani, S, Polucci, P, Riceputi, L, Sola, F, Visco, C, Zuccotto, F, Casuscelli, F.
Deposit date:2014-04-02
Release date:2014-07-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Fragment-Based Hit Discovery and Structure-Based Optimization of Aminotriazoloquinazolines as Novel Hsp90 Inhibitors.
Bioorg.Med.Chem., 22, 2014
4D6R
DownloadVisualize
BU of 4d6r by Molmil
crystal structure of human JMJD2D in complex with N-OXALYLGLYCINE and bound o-toluenesulfonamide
Descriptor: 1,2-ETHANEDIOL, LYSINE-SPECIFIC DEMETHYLASE 4D, N-OXALYLGLYCINE, ...
Authors:Krojer, T, Vollmar, M, Bradley, A, Crawley, L, Szykowska, A, Burgess-Brown, N, Gileadi, C, Johansson, C, Oppermann, U, Bountra, C, Arrowsmith, C.H, Edwards, A, von Delft, F.
Deposit date:2014-11-14
Release date:2014-12-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.398 Å)
Cite:Crystal Structure of Human Jmjd2D in Complex with N-Oxalylglycine and Bound O-Toluenesulfonamide
To be Published
1EVV
DownloadVisualize
BU of 1evv by Molmil
CRYSTAL STRUCTURE OF YEAST PHENYLALANINE TRANSFER RNA AT 2.0 A RESOLUTION
Descriptor: MAGNESIUM ION, PHENYLALANINE TRANSFER RNA, SPERMINE
Authors:Jovine, L, Djordjevic, S, Rhodes, D.
Deposit date:2000-04-20
Release date:2000-05-01
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of yeast phenylalanine tRNA at 2.0 A resolution: cleavage by Mg(2+) in 15-year old crystals.
J.Mol.Biol., 301, 2000
1EF7
DownloadVisualize
BU of 1ef7 by Molmil
CRYSTAL STRUCTURE OF HUMAN CATHEPSIN X
Descriptor: CATHEPSIN X
Authors:Guncar, G, Klemencic, I, Turk, B, Turk, V, Karaoglanovic-Carmona, A, Juliano, L, Turk, D.
Deposit date:2000-02-07
Release date:2000-03-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Crystal structure of cathepsin X: a flip-flop of the ring of His23 allows carboxy-monopeptidase and carboxy-dipeptidase activity of the protease.
Structure Fold.Des., 8, 2000

226707

數據於2024-10-30公開中

PDB statisticsPDBj update infoContact PDBjnumon