Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4RMV
DownloadVisualize
BU of 4rmv by Molmil
Crystal structure of the D76H Beta-2 Microglobulin mutant
Descriptor: ACETATE ION, Beta-2-microglobulin, TRIETHYLENE GLYCOL
Authors:de Rosa, M, Bolognesi, M, Ricagno, S.
Deposit date:2014-10-22
Release date:2015-11-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.463 Å)
Cite:Conformational dynamics in crystals reveal the molecular bases for D76N beta-2 microglobulin aggregation propensity.
Nat Commun, 9, 2018
8B7D
DownloadVisualize
BU of 8b7d by Molmil
Luminal domain of TMEM106B
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Transmembrane protein 106B
Authors:Pye, V.E, Roustan, C, Cherepanov, P.
Deposit date:2022-09-29
Release date:2023-07-19
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:TMEM106B is a receptor mediating ACE2-independent SARS-CoV-2 cell entry.
Cell, 186, 2023
7A5V
DownloadVisualize
BU of 7a5v by Molmil
CryoEM structure of a human gamma-aminobutyric acid receptor, the GABA(A)R-beta3 homopentamer, in complex with histamine and megabody Mb25 in lipid nanodisc
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Nakane, T, Kotecha, A, Sente, A, Yamashita, K, McMullan, G, Masiulis, S, Brown, P.M.G.E, Grigoras, I.T, Malinauskaite, L, Malinauskas, T, Miehling, J, Yu, L, Karia, D, Pechnikova, E.V, de Jong, E, Keizer, J, Bischoff, M, McCormack, J, Tiemeijer, P, Hardwick, S.W, Chirgadze, D.Y, Murshudov, G, Aricescu, A.R, Scheres, S.H.W.
Deposit date:2020-08-22
Release date:2020-11-18
Last modified:2020-11-25
Method:ELECTRON MICROSCOPY (1.7 Å)
Cite:Single-particle cryo-EM at atomic resolution.
Nature, 587, 2020
7A4M
DownloadVisualize
BU of 7a4m by Molmil
Cryo-EM structure of mouse heavy-chain apoferritin at 1.22 A
Descriptor: FE (III) ION, Ferritin heavy chain, ZINC ION
Authors:Nakane, T, Kotecha, A, Sente, A, Yamashita, K, McMullan, G, Masiulis, S, Brown, P.M.G.E, Grigoras, I.T, Malinauskaite, L, Malinauskas, T, Miehling, J, Yu, L, Karia, D, Pechnikova, E.V, de Jong, E, Keizer, J, Bischoff, M, McCormack, J, Tiemeijer, P, Hardwick, S.W, Chirgadze, D.Y, Murshudov, G, Aricescu, A.R, Scheres, S.H.W.
Deposit date:2020-08-20
Release date:2020-10-28
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (1.22 Å)
Cite:Single-particle cryo-EM at atomic resolution.
Nature, 587, 2020
6QAM
DownloadVisualize
BU of 6qam by Molmil
Solution NMR structure of outer membrane protein AlkL
Descriptor: Outer membrane protein AlkL
Authors:Schubeis, T, Andreas, L.B, Pintacuda, G.
Deposit date:2018-12-19
Release date:2020-01-15
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:A beta-barrel for oil transport through lipid membranes: Dynamic NMR structures of AlkL.
Proc.Natl.Acad.Sci.USA, 117, 2020
6QWR
DownloadVisualize
BU of 6qwr by Molmil
Solid-state NMR structure of outer membrane protein AlkL in DMPC lipid bilayers
Descriptor: Outer membrane protein AlkL
Authors:Schubeis, T, Andreas, L.B, Pintacuda, G.
Deposit date:2019-03-06
Release date:2020-03-18
Last modified:2024-06-19
Method:SOLID-STATE NMR
Cite:A beta-barrel for oil transport through lipid membranes: Dynamic NMR structures of AlkL.
Proc.Natl.Acad.Sci.USA, 117, 2020
6XEA
DownloadVisualize
BU of 6xea by Molmil
Crystal Structure of the PTP1B YopH WPD loop Chimera 3 bound to vanadate
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BENZAMIDINE, MAGNESIUM ION, ...
Authors:Olsen, K.J, Shen, R, Johnson, S.J, Hengge, A.C.
Deposit date:2020-06-12
Release date:2021-12-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.549 Å)
Cite:Insights into the importance of WPD-loop sequence for activity and structure in protein tyrosine phosphatases.
Chem Sci, 13, 2022
6XEE
DownloadVisualize
BU of 6xee by Molmil
Crystal Structure of the PTP1B YopH WPD loop Chimera 4 apo form
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BENZAMIDINE, DI(HYDROXYETHYL)ETHER, ...
Authors:Olsen, K.J, Shen, R, Johnson, S.J, Hengge, A.C.
Deposit date:2020-06-12
Release date:2021-12-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:Insights into the importance of WPD-loop sequence for activity and structure in protein tyrosine phosphatases.
Chem Sci, 13, 2022
6XE8
DownloadVisualize
BU of 6xe8 by Molmil
Crystal Structure of the PTP1B YopH WPD loop Chimera 3 apo form
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BENZAMIDINE, MAGNESIUM ION, ...
Authors:Olsen, K.J, Shen, R, Johnson, S.J, Hengge, A.C.
Deposit date:2020-06-12
Release date:2021-12-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.952 Å)
Cite:Insights into the importance of WPD-loop sequence for activity and structure in protein tyrosine phosphatases.
Chem Sci, 13, 2022
6XED
DownloadVisualize
BU of 6xed by Molmil
Crystal Structure of the PTP1B YopH WPD loop Chimera 3 bound to tungstate
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BENZAMIDINE, MAGNESIUM ION, ...
Authors:Olsen, K.J, Shen, R, Johnson, S.J, Hengge, A.C.
Deposit date:2020-06-12
Release date:2021-12-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.795 Å)
Cite:Insights into the importance of WPD-loop sequence for activity and structure in protein tyrosine phosphatases.
Chem Sci, 13, 2022
6XEF
DownloadVisualize
BU of 6xef by Molmil
Crystal structure of the PTP1B YopH WPD loop Chimera 4 bound to vanadate
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BENZAMIDINE, MAGNESIUM ION, ...
Authors:Olsen, K.J, Shen, R, Johnson, S.J, Hengge, A.C.
Deposit date:2020-06-12
Release date:2021-12-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.048 Å)
Cite:Insights into the importance of WPD-loop sequence for activity and structure in protein tyrosine phosphatases.
Chem Sci, 13, 2022
6XEG
DownloadVisualize
BU of 6xeg by Molmil
Crystal structure of the PTP1B YopH WPD loop Chimera 4 bound to tungstate
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BENZAMIDINE, MAGNESIUM ION, ...
Authors:Olsen, K.J, Shen, R, Johnson, S.J, Hengge, A.C.
Deposit date:2020-06-12
Release date:2021-12-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.549 Å)
Cite:Insights into the importance of WPD-loop sequence for activity and structure in protein tyrosine phosphatases.
Chem Sci, 13, 2022
7SJ1
DownloadVisualize
BU of 7sj1 by Molmil
Structure of shaker-W434F
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, POTASSIUM ION, Potassium voltage-gated channel protein Shaker
Authors:Tan, X, Bae, C, Stix, R, Fernandez, A.I, Huffer, K, Chang, T, Jiang, J, Faraldo-Gomez, J.D, Swartz, K.J.
Deposit date:2021-10-15
Release date:2022-03-30
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structure of the Shaker Kv channel and mechanism of slow C-type inactivation.
Sci Adv, 8, 2022
7SIP
DownloadVisualize
BU of 7sip by Molmil
Structure of shaker-IR
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, POTASSIUM ION, Potassium voltage-gated channel protein Shaker
Authors:Tan, X, Bae, C, Stix, R, Fernandez, A.I, Huffer, K, Chang, T, Jiang, J, Faraldo-Gomez, J.D, Swartz, K.J.
Deposit date:2021-10-14
Release date:2022-03-30
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure of the Shaker Kv channel and mechanism of slow C-type inactivation.
Sci Adv, 8, 2022
7QL5
DownloadVisualize
BU of 7ql5 by Molmil
Torpedo muscle-type nicotinic acetylcholine receptor - nicotine-bound conformation
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, (S)-3-(1-METHYLPYRROLIDIN-2-YL)PYRIDINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zarkadas, E, Pebay-Peyroula, E, Baenziger, J, Nury, H.
Deposit date:2021-12-19
Release date:2022-02-09
Last modified:2022-05-04
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Conformational transitions and ligand-binding to a muscle-type nicotinic acetylcholine receptor.
Neuron, 110, 2022
7QKO
DownloadVisualize
BU of 7qko by Molmil
Torpedo muscle-type nicotinic acetylcholine receptor - Resting conformation
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, Acetylcholine receptor subunit alpha, Acetylcholine receptor subunit beta, ...
Authors:Zarkadas, E, Pebay-Peyroula, E, Baenziger, J, Nury, H.
Deposit date:2021-12-18
Release date:2022-02-09
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Conformational transitions and ligand-binding to a muscle-type nicotinic acetylcholine receptor.
Neuron, 110, 2022
7QL6
DownloadVisualize
BU of 7ql6 by Molmil
Torpedo muscle-type nicotinic acetylcholine receptor - carbamylcholine-bound conformation
Descriptor: 2-[(AMINOCARBONYL)OXY]-N,N,N-TRIMETHYLETHANAMINIUM, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zarkadas, E, Pebay-Peyroula, E, Baenziger, J, Nury, H.
Deposit date:2021-12-19
Release date:2022-02-09
Last modified:2022-05-04
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Conformational transitions and ligand-binding to a muscle-type nicotinic acetylcholine receptor.
Neuron, 110, 2022
7S4F
DownloadVisualize
BU of 7s4f by Molmil
Protein Tyrosine Phosphatase 1B - F182Q mutant bound with Hepes
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, MAGNESIUM ION, ...
Authors:Brandao, T.A.S, Hengge, A.C, Johnson, S.J.
Deposit date:2021-09-08
Release date:2022-09-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Insights into the importance of WPD-loop sequence for activity and structure in protein tyrosine phosphatases.
Chem Sci, 13, 2022
7TJ8
DownloadVisualize
BU of 7tj8 by Molmil
Cryo-EM structure of the human Nax channel in complex with beta3 solved in nanodiscs
Descriptor: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Noland, C.L, Kschonsak, M, Ciferri, C, Payandeh, J.
Deposit date:2022-01-14
Release date:2022-03-30
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure-guided unlocking of Na X reveals a non-selective tetrodotoxin-sensitive cation channel.
Nat Commun, 13, 2022
7TJ9
DownloadVisualize
BU of 7tj9 by Molmil
Cryo-EM structure of the human Nax channel in complex with beta3 solved in GDN
Descriptor: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Noland, C.L, Kschonsak, M, Ciferri, C, Payandeh, J.
Deposit date:2022-01-14
Release date:2022-03-30
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structure-guided unlocking of Na X reveals a non-selective tetrodotoxin-sensitive cation channel.
Nat Commun, 13, 2022
7X7S
DownloadVisualize
BU of 7x7s by Molmil
Solution structure of human adenylate kinase 1 (hAK1)
Descriptor: Adenylate kinase isoenzyme 1
Authors:Zhang, H.
Deposit date:2022-03-10
Release date:2022-05-11
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:ADP-Induced Conformational Transition of Human Adenylate Kinase 1 Is Triggered by Suppressing Internal Motion of alpha 3 alpha 4 and alpha 7 alpha 8 Fragments on the ps-ns Timescale.
Biomolecules, 12, 2022
2QN4
DownloadVisualize
BU of 2qn4 by Molmil
Structure and function study of rice bifunctional alpha-amylase/subtilisin inhibitor from Oryza sativa
Descriptor: Alpha-amylase/subtilisin inhibitor
Authors:Peng, W.Y, Lin, Y.H, Huang, Y.C, Guan, H.H, Hsieh, Y.C, Chen, C.J.
Deposit date:2007-07-18
Release date:2008-07-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and Function Study of Rice Bifunctional Alpha-Amylase/Subtilisin Inhibitor from Oryza Sativa
To be Published
2QN5
DownloadVisualize
BU of 2qn5 by Molmil
Crystal Structure and Functional Study of the Bowman-Birk Inhibitor from Rice Bran in Complex with Bovine Trypsin
Descriptor: Bowman-Birk type bran trypsin inhibitor, Cationic trypsin
Authors:Li, H.T, Lin, Y.H, Guan, H.H, Hsieh, Y.C, Wang, A.H.J, Chen, C.J.
Deposit date:2007-07-18
Release date:2008-07-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal Structure and Functional Study of the Bowman-Birk Inhibitor from Rice Bran in Complex with Bovine Trypsin
To be Published
6U75
DownloadVisualize
BU of 6u75 by Molmil
Crystal Structure of S. Cerevisiae SUMO E3 Ligase SIZ2
Descriptor: E3 SUMO-protein ligase SIZ2, ZINC ION
Authors:Lima, C.D, Cappadocia, L.
Deposit date:2019-08-31
Release date:2020-10-28
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:DNA asymmetry promotes SUMO modification of the single-stranded DNA-binding protein RPA.
Embo J., 40, 2021
7YQK
DownloadVisualize
BU of 7yqk by Molmil
cryo-EM structure of gammaH2AXK15ub-H4K20me2 nucleosome bound to 53BP1
Descriptor: DNA (145-MER), Histone H2AX, Histone H2B, ...
Authors:Ai, H.S, GuoChao, C, Qingyue, G, Ze-Bin, T, Zhiheng, D, Xin, L, Fan, Y, Ziyu, X, Jia-Bin, L, Changlin, T, Liu, L.
Deposit date:2022-08-07
Release date:2022-08-17
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Chemical Synthesis of Post-Translationally Modified H2AX Reveals Redundancy in Interplay between Histone Phosphorylation, Ubiquitination, and Methylation on the Binding of 53BP1 with Nucleosomes.
J.Am.Chem.Soc., 144, 2022

222926

數據於2024-07-24公開中

PDB statisticsPDBj update infoContact PDBjnumon