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6RWD
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BU of 6rwd by Molmil
Crystal structure of SjGST in complex with GSH and ellagic acid at 1.53 Angstrom resolution
Descriptor: 2,3,7,8-tetrahydroxychromeno[5,4,3-cde]chromene-5,10-dione, CHLORIDE ION, GLUTATHIONE, ...
Authors:Olfsen, J, Pandian, R, Sayed, Y, Dirr, H.W, Achilonu, I.A.
Deposit date:2019-06-04
Release date:2019-06-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Molecular basis of inhibition of Schistosoma japonicum glutathione transferase by ellagic acid: Insights into biophysical and structural studies.
Mol.Biochem.Parasitol., 240, 2020
4XMK
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BU of 4xmk by Molmil
Crystal structure of Fab of HIV-1 gp120 V3-specific human monoclonal antibody 2424 in complex with JR-FL V3 peptide
Descriptor: HIV-1 JR-FL gp120 V3 peptide, Heavy chain of HIV-1 gp120 V3-specific human monoclonal antibody 2424, Light chain of HIV-1 gp120 V3-specific human monoclonal antibody 2424
Authors:Kong, X.-P, Pan, R.
Deposit date:2015-01-14
Release date:2015-07-08
Last modified:2019-12-11
Method:X-RAY DIFFRACTION (3.179 Å)
Cite:Functional and Structural Characterization of Human V3-Specific Monoclonal Antibody 2424 with Neutralizing Activity against HIV-1 JRFL.
J.Virol., 89, 2015
6P5J
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BU of 6p5j by Molmil
Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 2)
Descriptor: 18S rRNA, 28S rRNA, 5.8S rRNA, ...
Authors:Acosta-Reyes, F.J, Neupane, R, Frank, J, Fernandez, I.S.
Deposit date:2019-05-30
Release date:2019-09-18
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The Israeli acute paralysis virus IRES captures host ribosomes by mimicking a ribosomal state with hybrid tRNAs.
Embo J., 38, 2019
6P5I
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BU of 6p5i by Molmil
Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 1)
Descriptor: 18S rRNA, 28S rRNA, 5.8S rRNA, ...
Authors:Acosta-Reyes, F.J, Neupane, R, Frank, J, Fernandez, I.S.
Deposit date:2019-05-30
Release date:2019-09-18
Last modified:2020-02-26
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The Israeli acute paralysis virus IRES captures host ribosomes by mimicking a ribosomal state with hybrid tRNAs.
Embo J., 38, 2019
6P4H
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BU of 6p4h by Molmil
Structure of a mammalian small ribosomal subunit in complex with the Israeli Acute Paralysis Virus IRES (Class 2)
Descriptor: 18S rRNA, IAPV-IRES, RACK1, ...
Authors:Acosta-Reyes, F.J, Neupane, R, Frank, J, Fernandez, I.S.
Deposit date:2019-05-27
Release date:2019-09-18
Last modified:2020-01-08
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:The Israeli acute paralysis virus IRES captures host ribosomes by mimicking a ribosomal state with hybrid tRNAs.
Embo J., 38, 2019
6P4G
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BU of 6p4g by Molmil
Structure of a mammalian small ribosomal subunit in complex with the Israeli Acute Paralysis Virus IRES (Class 1)
Descriptor: 18S rRNA, IAPV-IRES, RACK1, ...
Authors:Acosta-Reyes, F.J, Neupane, R, Frank, J, Fernandez, I.S.
Deposit date:2019-05-27
Release date:2019-09-18
Last modified:2020-01-08
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The Israeli acute paralysis virus IRES captures host ribosomes by mimicking a ribosomal state with hybrid tRNAs.
Embo J., 38, 2019
6P5N
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BU of 6p5n by Molmil
Structure of a mammalian 80S ribosome in complex with a single translocated Israeli Acute Paralysis Virus IRES and eRF1
Descriptor: 18S rRNA, 28S rRNA, 5.8S rRNA, ...
Authors:Acosta-Reyes, F.J, Neupane, R, Frank, J, Fernandez, I.S.
Deposit date:2019-05-30
Release date:2019-09-25
Last modified:2020-01-08
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:The Israeli acute paralysis virus IRES captures host ribosomes by mimicking a ribosomal state with hybrid tRNAs.
Embo J., 38, 2019
6P5K
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BU of 6p5k by Molmil
Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 3)
Descriptor: 18S rRNA, 28S rRNA, 5.8S rRNA, ...
Authors:Acosta-Reyes, F.J, Neupane, R, Frank, J, Fernandez, I.S.
Deposit date:2019-05-30
Release date:2019-09-18
Last modified:2020-01-08
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The Israeli acute paralysis virus IRES captures host ribosomes by mimicking a ribosomal state with hybrid tRNAs.
Embo J., 38, 2019
8A4I
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BU of 8a4i by Molmil
Crystal structure of SALL4 zinc finger cluster 4 with AT-rich DNA
Descriptor: DNA (5'-D(*GP*AP*TP*AP*TP*TP*AP*AP*TP*AP*TP*C)-3'), MAGNESIUM ION, Sal-like protein 4, ...
Authors:Watson, J.A, Pantier, R, Jayachandran, U, Chhatbar, K, Alexander-Howden, B, Kruusvee, V, Prendecki, M, Bird, A, Cook, A.G.
Deposit date:2022-06-11
Release date:2023-01-11
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Structure of SALL4 zinc finger domain reveals link between AT-rich DNA binding and Okihiro syndrome.
Life Sci Alliance, 6, 2023
4RBP
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BU of 4rbp by Molmil
Crystal structure of HIV neutralizing antibody 2G12 in complex with a bacterial oligosaccharide analog of mammalian oligomanose
Descriptor: Fab 2G12 heavy chain, Fab 2G12 light chain, GLYCEROL, ...
Authors:Stanfield, R.L, Wilson, I.A, De Castro, C, Marzaioli, A.M, Pantophlet, R.
Deposit date:2014-09-12
Release date:2014-11-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of the HIV neutralizing antibody 2G12 in complex with a bacterial oligosaccharide analog of mammalian oligomannose.
Glycobiology, 25, 2015
8CI7
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BU of 8ci7 by Molmil
Apo-crystal structure of a wild-type South African HIV-1 subtype C protease at 2.4 angstrom
Descriptor: Truncated pol polyprotein
Authors:Dlamini, N.P, Pandian, R, Onisuru, O, Achilonu, I.A, Sayed, Y.
Deposit date:2023-02-09
Release date:2023-04-12
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Biophysical and biochemical characterization of a wild-type South African HIV-1 subtype C protease
To Be Published
4TX1
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BU of 4tx1 by Molmil
The crystal structure of carbohydrate acetylesterase family member from Sinorhizobium meliloti
Descriptor: Esterase
Authors:Kim, K, Kim, S.S, Pandian, R, Ngo, T.D.
Deposit date:2014-07-02
Release date:2014-12-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural and biochemical characterization of a carbohydrate acetylesterase from Sinorhizobium meliloti 1021.
Febs Lett., 589, 2015
1LMA
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BU of 1lma by Molmil
PROTEIN HYDRATION AND WATER STRUCTURE: X-RAY ANALYSIS OF A CLOSELY PACKED PROTEIN CRYSTAL WITH VERY LOW SOLVENT CONTENT
Descriptor: HEN EGG WHITE LYSOZYME, NITRATE ION
Authors:Madhusudan, Kodandapani, R, Vijayan, M.
Deposit date:1992-08-14
Release date:1994-01-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Protein hydration and water structure: X-ray analysis of a closely packed protein crystal with very low solvent content.
Acta Crystallogr.,Sect.D, 49, 1993
6TEA
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BU of 6tea by Molmil
Tail of native GTA particle computed with helical refinement, C6 symmetry
Descriptor: Phage major tail protein, TP901-1 family
Authors:Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
Deposit date:2019-11-11
Release date:2020-07-22
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.89 Å)
Cite:Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TO8
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BU of 6to8 by Molmil
Neck of empty GTA particle computed with C12 symmetry
Descriptor: Adaptor protein Rcc01688, Portal protein Rcc01684
Authors:Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
Deposit date:2019-12-11
Release date:2020-07-22
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.36 Å)
Cite:Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TB9
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BU of 6tb9 by Molmil
Capsid of native GTA particle computed with C5 symmetry
Descriptor: Head spike base Rcc01079, Head spike fiber Rcc01080, Major capsid protein Rcc01687
Authors:Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
Deposit date:2019-11-01
Release date:2020-07-22
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.56 Å)
Cite:Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TSU
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BU of 6tsu by Molmil
Capsid of empty GTA particle computed with C5 symmetry
Descriptor: Major capsid protein Rcc01687, Uncharacterized protein
Authors:Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
Deposit date:2019-12-21
Release date:2020-07-22
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TE9
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BU of 6te9 by Molmil
Neck of native GTA particle computed with C6 symmetry
Descriptor: Adaptor protein Rcc01688, Phage major tail protein, TP901-1 family, ...
Authors:Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
Deposit date:2019-11-11
Release date:2020-07-22
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.58 Å)
Cite:Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TE8
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BU of 6te8 by Molmil
Neck of native GTA particle computed with C12 symmetry
Descriptor: Adaptor protein Rcc01688, Phage portal protein, HK97 family
Authors:Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
Deposit date:2019-11-11
Release date:2020-07-22
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TEB
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BU of 6teb by Molmil
Tail-baseplate interface of native GTA particle computed with C6 symmetry
Descriptor: Distal tail protein Rcc01695, Tail tube protein Rcc01691
Authors:Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
Deposit date:2019-11-11
Release date:2020-07-22
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (4.14 Å)
Cite:Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TOA
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BU of 6toa by Molmil
Neck of empty GTA particle computed with C6 symmetry
Descriptor: Adaptor protein Rcc01688, Portal protein Rcc01684, Stopper protein Rcc01689, ...
Authors:Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
Deposit date:2019-12-11
Release date:2020-07-22
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.47 Å)
Cite:Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TSV
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BU of 6tsv by Molmil
Tail of empty GTA particle computed with helical refinement, C6 symmetry
Descriptor: Tail tube protein Rcc01691
Authors:Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
Deposit date:2019-12-21
Release date:2020-07-22
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.78 Å)
Cite:Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TSW
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BU of 6tsw by Molmil
Isometric capsid of empty GTA particle computed with I4(I,n25r) symmetry
Descriptor: Major capsid protein Rcc01687
Authors:Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
Deposit date:2019-12-21
Release date:2020-07-22
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (4.03 Å)
Cite:Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TUI
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BU of 6tui by Molmil
Virion of empty GTA particle
Descriptor: Adaptor protein Rcc01688, Phage major capsid protein, HK97 family, ...
Authors:Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
Deposit date:2020-01-07
Release date:2020-10-14
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (10.47 Å)
Cite:Virion of empty GTA particle
Nat Commun, 11, 2020
6TBA
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BU of 6tba by Molmil
Virion of native gene transfer agent (GTA) particle
Descriptor: IRON/SULFUR CLUSTER, Phage major capsid protein, HK97 family, ...
Authors:Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
Deposit date:2019-11-01
Release date:2020-07-22
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (4.54 Å)
Cite:Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020

222624

數據於2024-07-17公開中

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