Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3ULT
DownloadVisualize
BU of 3ult by Molmil
Crystal structure of an ice-binding protein from the perennial ryegrass, Lolium perenne
Descriptor: 1,2-ETHANEDIOL, ETHANOL, Ice recrystallization inhibition protein-like protein
Authors:Middleton, A.J, Faucher, F, Campbell, R.L, Davies, P.L.
Deposit date:2011-11-11
Release date:2012-02-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Antifreeze protein from freeze-tolerant grass has a beta-roll fold with an irregularly structured ice-binding site.
J.Mol.Biol., 416, 2012
1MDW
DownloadVisualize
BU of 1mdw by Molmil
Crystal Structure of Calcium-Bound Protease Core of Calpain II Reveals the Basis for Intrinsic Inactivation
Descriptor: CALCIUM ION, Calpain II, catalytic subunit
Authors:Moldoveanu, T, Hosfield, C.M, Lim, D, Jia, Z, Davies, P.L.
Deposit date:2002-08-07
Release date:2003-04-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Calpain silencing by a reversible intrinsic mechanism.
Nat.Struct.Biol., 10, 2003
1N4I
DownloadVisualize
BU of 1n4i by Molmil
Solution structure of spruce budworm antifreeze protein at 5 degrees celsius
Descriptor: thermal hysteresis protein
Authors:Graether, S.P, Gagne, S.M, Spyracopoulos, L, Jia, Z, Davies, P.L, Sykes, B.D.
Deposit date:2002-10-31
Release date:2003-04-08
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Spruce Budworm Antifreeze Protein: Changes in Structure and Dynamics at Low Temperature
J.Mol.Biol., 327, 2003
3P4G
DownloadVisualize
BU of 3p4g by Molmil
X-ray crystal structure of a hyperactive, Ca2+-dependent, beta-helical antifreeze protein from an Antarctic bacterium
Descriptor: ACETATE ION, Antifreeze protein, CALCIUM ION, ...
Authors:Garnham, C.P, Campbell, R.L, Davies, P.L.
Deposit date:2010-10-06
Release date:2011-04-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Anchored clathrate waters bind antifreeze proteins to ice.
Proc.Natl.Acad.Sci.USA, 108, 2011
3MSI
DownloadVisualize
BU of 3msi by Molmil
TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12
Descriptor: TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12
Authors:Deluca, C.I, Davies, P.L, Ye, Q, Jia, Z.
Deposit date:1997-09-17
Release date:1998-10-21
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:The effects of steric mutations on the structure of type III antifreeze protein and its interaction with ice.
J.Mol.Biol., 275, 1998
7JJV
DownloadVisualize
BU of 7jjv by Molmil
Crystal waters on the nine polyproline type II helical bundle springtail antifreeze protein from Granisotoma rainieri match the ice lattice
Descriptor: GrAFP antifreeze protein
Authors:Scholl, C.L, Tsuda, S, Graham, L.A, Davies, P.L.
Deposit date:2020-07-27
Release date:2021-01-27
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Crystal waters on the nine polyproline type II helical bundle springtail antifreeze protein from Granisotoma rainieri match the ice lattice.
Febs J., 288, 2021
5C7R
DownloadVisualize
BU of 5c7r by Molmil
Revealing surface waters on an antifreeze protein by fusion protein crystallography
Descriptor: Fusion protein of Maltose-binding periplasmic protein and Type-3 ice-structuring protein HPLC 12, SULFATE ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Sun, T, Gauthier, S, Campbell, R.L, Davies, P.L.
Deposit date:2015-06-24
Release date:2015-09-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Revealing Surface Waters on an Antifreeze Protein by Fusion Protein Crystallography Combined with Molecular Dynamic Simulations.
J.Phys.Chem.B, 119, 2015
6M8M
DownloadVisualize
BU of 6m8m by Molmil
PA14 sugar-binding domain from RTX adhesin
Descriptor: CALCIUM ION, Putative large adhesion protein (Lap) involved in biofilm formation, SODIUM ION, ...
Authors:Vance, T.D.R, Conroy, B, Davies, P.L.
Deposit date:2018-08-22
Release date:2019-09-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure and functional analysis of a bacterial adhesin sugar-binding domain.
Plos One, 14, 2019
4AME
DownloadVisualize
BU of 4ame by Molmil
TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12 T18A
Descriptor: PROTEIN (ANTIFREEZE PROTEIN TYPE III)
Authors:Graether, S.P, Deluca, C.I, Baardsnes, J, Hill, G.A, Davies, P.L, Jia, Z.
Deposit date:1999-01-24
Release date:1999-04-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Quantitative and qualitative analysis of type III antifreeze protein structure and function.
J.Biol.Chem., 274, 1999
6MSI
DownloadVisualize
BU of 6msi by Molmil
TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12
Descriptor: TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12
Authors:Deluca, C.I, Davies, P.L, Ye, Q, Jia, Z.
Deposit date:1997-09-17
Release date:1998-10-21
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The effects of steric mutations on the structure of type III antifreeze protein and its interaction with ice.
J.Mol.Biol., 275, 1998
7MSI
DownloadVisualize
BU of 7msi by Molmil
TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12
Descriptor: TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12
Authors:Deluca, C.I, Davies, P.L, Ye, Q, Jia, Z.
Deposit date:1997-09-17
Release date:1998-10-21
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The effects of steric mutations on the structure of type III antifreeze protein and its interaction with ice.
J.Mol.Biol., 275, 1998
6X9M
DownloadVisualize
BU of 6x9m by Molmil
3-O-methyl-glucose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
Descriptor: 1,2-ETHANEDIOL, 3-O-methyl-beta-D-glucopyranose, Antifreeze protein, ...
Authors:Guo, S, Davies, P.L.
Deposit date:2020-06-03
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X7J
DownloadVisualize
BU of 6x7j by Molmil
fucose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
Descriptor: 1,2-ETHANEDIOL, Antifreeze protein, CALCIUM ION, ...
Authors:Guo, S, Davies, P.L.
Deposit date:2020-05-30
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X7Y
DownloadVisualize
BU of 6x7y by Molmil
N-acetyl-glucosamine-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Guo, S, Davies, P.L.
Deposit date:2020-05-31
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X95
DownloadVisualize
BU of 6x95 by Molmil
2-deoxy-glucose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
Descriptor: 1,2-ETHANEDIOL, 2-deoxy-alpha-D-arabino-hexopyranose, Antifreeze protein, ...
Authors:Guo, S, Davies, P.L.
Deposit date:2020-06-02
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X8Y
DownloadVisualize
BU of 6x8y by Molmil
Ribose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
Descriptor: 1,2-ETHANEDIOL, Antifreeze protein, CALCIUM ION, ...
Authors:Guo, S, Davies, P.L.
Deposit date:2020-06-02
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6XAC
DownloadVisualize
BU of 6xac by Molmil
Galactose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
Descriptor: Antifreeze protein, CALCIUM ION, beta-D-galactopyranose
Authors:Guo, S, Davies, P.L.
Deposit date:2020-06-04
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X7T
DownloadVisualize
BU of 6x7t by Molmil
Allose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
Descriptor: Antifreeze protein, CALCIUM ION, alpha-D-allofuranose, ...
Authors:Guo, S, Davies, P.L.
Deposit date:2020-05-30
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X7X
DownloadVisualize
BU of 6x7x by Molmil
mannose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
Descriptor: 1,2-ETHANEDIOL, Antifreeze protein, CALCIUM ION, ...
Authors:Guo, S, Davies, P.L.
Deposit date:2020-05-31
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6XAQ
DownloadVisualize
BU of 6xaq by Molmil
Alpha-methyl-glucose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
Descriptor: Antifreeze protein, CALCIUM ION, methyl alpha-D-glucopyranoside
Authors:Guo, S, Davies, P.L.
Deposit date:2020-06-04
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X7Z
DownloadVisualize
BU of 6x7z by Molmil
Inositol-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
Descriptor: 1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE, 1,2-ETHANEDIOL, Antifreeze protein, ...
Authors:Guo, S, Davies, P.L.
Deposit date:2020-06-01
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X9P
DownloadVisualize
BU of 6x9p by Molmil
2-deoxyribose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
Descriptor: 1,2-ETHANEDIOL, 2-deoxy-beta-D-ribopyranose, Antifreeze protein, ...
Authors:Guo, S, Davies, P.L.
Deposit date:2020-06-03
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X8A
DownloadVisualize
BU of 6x8a by Molmil
Sucrose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
Descriptor: Antifreeze protein, CALCIUM ION, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
Authors:Guo, S, Davies, P.L.
Deposit date:2020-06-01
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X8D
DownloadVisualize
BU of 6x8d by Molmil
Arabinose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
Descriptor: 1,2-ETHANEDIOL, Antifreeze protein, CALCIUM ION, ...
Authors:Guo, S, Davies, P.L.
Deposit date:2020-06-01
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6XA5
DownloadVisualize
BU of 6xa5 by Molmil
Trehalose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
Descriptor: Antifreeze protein, CALCIUM ION, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
Authors:Guo, S, Davies, P.L.
Deposit date:2020-06-03
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021

226707

數據於2024-10-30公開中

PDB statisticsPDBj update infoContact PDBjnumon