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4L69
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BU of 4l69 by Molmil
Rv2372c of Mycobacterium tuberculosis is RsmE like methyltransferse
Descriptor: Ribosomal RNA small subunit methyltransferase E
Authors:Kumar, A, Taneja, B.
Deposit date:2013-06-12
Release date:2014-03-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The structure of Rv2372c identifies an RsmE-like methyltransferase from Mycobacterium tuberculosis
Acta Crystallogr.,Sect.D, 70, 2014
3KJZ
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BU of 3kjz by Molmil
Crystal structure of native peptidyl-tRNA hydrolase from Mycobacterium smegmatis
Descriptor: Peptidyl-tRNA hydrolase
Authors:Kumar, A, Singh, N, Yadav, R, Prem Kumar, R, Sharma, S, Arora, A, Singh, T.P.
Deposit date:2009-11-04
Release date:2010-08-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of peptidyl-tRNA hydrolase from mycobacterium smegmatis reveals novel features related to enzyme dynamics.
Int J Biochem Mol Biol, 3, 2012
8BR4
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BU of 8br4 by Molmil
Structure of GAPDH from Mycobacterium tuberculosis
Descriptor: 1,2-ETHANEDIOL, Glyceraldehyde-3-phosphate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Kumar, A, Karthikeyan, S.
Deposit date:2022-11-22
Release date:2023-11-01
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.29 Å)
Cite:Stoichiometry of ligand binding and role of C-terminal lysines in Mycobacterium tuberculosis and human GAPDH multifunctionality.
Febs J., 2024
9ERK
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BU of 9erk by Molmil
Cryo-EM structure of sodium pumping Rnf complex from Acetobacterium woodii reduced with low potential ferredoxin (consensus map)
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ...
Authors:Kumar, A, Schuller, J.M.
Deposit date:2024-03-23
Release date:2025-03-05
Last modified:2025-03-19
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Molecular principles of redox-coupled sodium pumping of the ancient Rnf machinery.
Nat Commun, 16, 2025
9ERI
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BU of 9eri by Molmil
Cryo-EM structure of sodium pumping Rnf complex from Acetobacterium woodii bound to NADH
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ...
Authors:Kumar, A, Schuller, J.M.
Deposit date:2024-03-23
Release date:2025-03-05
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Molecular principles of redox-coupled sodium pumping of the ancient Rnf machinery.
Nat Commun, 16, 2025
9ERJ
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BU of 9erj by Molmil
Cryo-EM structure of sodium pumping Rnf complex from Acetobacterium woodii reduced with low potential Ferredoxin
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ...
Authors:Kumar, A, Schuller, J.M.
Deposit date:2024-03-23
Release date:2025-03-05
Last modified:2025-03-19
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Molecular principles of redox-coupled sodium pumping of the ancient Rnf machinery.
Nat Commun, 16, 2025
9ERL
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BU of 9erl by Molmil
Cryo-EM structure of sodium pumping Rnf complex from Acetobacterium woodii in apo state
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ...
Authors:Kumar, A, Schuller, J.M.
Deposit date:2024-03-23
Release date:2025-03-05
Last modified:2025-03-19
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Molecular principles of redox-coupled sodium pumping of the ancient Rnf machinery.
Nat Commun, 16, 2025
4LQ6
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BU of 4lq6 by Molmil
Crystal structure of Rv3717 reveals a novel amidase from M. tuberculosis
Descriptor: CHLORIDE ION, N-acetymuramyl-L-alanine amidase-related protein, PLATINUM (II) ION, ...
Authors:Kumar, A, Kumar, S, Kumar, D, Mishra, A, Dewangan, R.P, Shrivastava, P, Ramachandran, S, Taneja, B.
Deposit date:2013-07-17
Release date:2013-12-04
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:The structure of Rv3717 reveals a novel amidase from Mycobacterium tuberculosis.
Acta Crystallogr.,Sect.D, 69, 2013
2RKW
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BU of 2rkw by Molmil
Intermediate position of ATP on its trail to the binding pocket inside the subunit B mutant R416W of the energy converter A1Ao ATP synthase
Descriptor: V-type ATP synthase beta chain
Authors:Kumar, A, Manimekalai, M.S.S, Balakrishna, A.M, Hunke, C, Gruber, G.
Deposit date:2007-10-18
Release date:2008-09-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Spectroscopic and crystallographic studies of the mutant R416W give insight into the nucleotide binding traits of subunit B of the A1Ao ATP synthase
Proteins, 75, 2009
5Y06
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BU of 5y06 by Molmil
Structural characterization of msmeg_4306 from Mycobacterium smegmatis
Descriptor: GLYCEROL, ZINC ION, msmeg_4306
Authors:Kumar, A, Karthikeyan, S.
Deposit date:2017-07-14
Release date:2018-05-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.606 Å)
Cite:Crystal structure of the MSMEG_4306 gene product from Mycobacterium smegmatis
Acta Crystallogr F Struct Biol Commun, 74, 2018
5Y05
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BU of 5y05 by Molmil
Structural characterization of msmeg_4306 from Mycobacterium smegmatis
Descriptor: ZINC ION, msmeg_4306
Authors:Kumar, A, Karthikeyan, S.
Deposit date:2017-07-14
Release date:2018-05-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.799 Å)
Cite:Crystal structure of the MSMEG_4306 gene product from Mycobacterium smegmatis
Acta Crystallogr F Struct Biol Commun, 74, 2018
8BW0
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BU of 8bw0 by Molmil
Structure of CEACAM5 A3-B3 domain in Complex with Tusamitamab Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Carcinoembryonic antigen-related cell adhesion molecule 5, ...
Authors:Kumar, A, Bertrand, T, Rapisarda, C, Rak, A.
Deposit date:2022-12-06
Release date:2024-01-24
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:Structural insights into epitope-paratope interactions of a monoclonal antibody targeting CEACAM5-expressing tumors.
Nat Commun, 15, 2024
6Y90
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BU of 6y90 by Molmil
Structure of full-length CD20 in complex with Rituximab Fab
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, B-lymphocyte antigen CD20, CHOLESTEROL HEMISUCCINATE, ...
Authors:Kumar, A, Reyes, N.
Deposit date:2020-03-06
Release date:2020-08-26
Last modified:2025-04-09
Method:ELECTRON MICROSCOPY (3.69 Å)
Cite:Binding mechanisms of therapeutic antibodies to human CD20.
Science, 369, 2020
6Y97
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BU of 6y97 by Molmil
Structure of full-length CD20 in complex with Obinutuzumab Fab
Descriptor: B-lymphocyte antigen CD20, Obinutuzumab Fab heavy chain, Obinutuzumab Fab light chain
Authors:Kumar, A, Reyes, N.
Deposit date:2020-03-06
Release date:2020-08-26
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (4.33 Å)
Cite:Binding mechanisms of therapeutic antibodies to human CD20.
Science, 369, 2020
6Y92
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BU of 6y92 by Molmil
Structure of full-length CD20 in complex with Ofatumumab Fab
Descriptor: B-lymphocyte antigen CD20, CHOLESTEROL HEMISUCCINATE, Ofatumumab Fab heavy chain, ...
Authors:Kumar, A, Reyes, N.
Deposit date:2020-03-06
Release date:2020-08-26
Last modified:2025-04-09
Method:ELECTRON MICROSCOPY (4.73 Å)
Cite:Binding mechanisms of therapeutic antibodies to human CD20.
Science, 369, 2020
6Y9A
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BU of 6y9a by Molmil
Structure of full-length CD20 in complex with Obinutuzumab Fab
Descriptor: B-lymphocyte antigen CD20, Obinutuzumab Fab Light chain, Obinutuzumab Fab heavy chain
Authors:Kumar, A, Reyes, N.
Deposit date:2020-03-06
Release date:2020-08-26
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Binding mechanisms of therapeutic antibodies to human CD20.
Science, 369, 2020
8C4A
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BU of 8c4a by Molmil
Structural and interactional insights into the glideosome-associated connector from Toxoplasma gondii
Descriptor: Putative anonymous antigen-1
Authors:Kumar, A, Morgan, R.M.L, Matthews, S.J.
Deposit date:2023-01-03
Release date:2023-07-19
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.675 Å)
Cite:Structural and regulatory insights into the glideosome-associated connector from Toxoplasma gondii.
Elife, 12, 2023
6JQV
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BU of 6jqv by Molmil
Crystal structure of Arabidopsis thaliana NRP2
Descriptor: NAP1-related protein 2
Authors:Kumar, A, Vasudevan, D.
Deposit date:2019-04-01
Release date:2019-07-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.42 Å)
Cite:Structural Characterization ofArabidopsis thalianaNAP1-Related Protein 2 (AtNRP2) and Comparison with its Homolog AtNRP1.
Molecules, 24, 2019
5N74
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BU of 5n74 by Molmil
Microtubule end binding protein complex
Descriptor: Karyogamy protein KAR9, Microtubule-associated protein RP/EB family member 1
Authors:Kumar, A, Steinmetz, M.
Deposit date:2017-02-18
Release date:2017-06-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Short Linear Sequence Motif LxxPTPh Targets Diverse Proteins to Growing Microtubule Ends.
Structure, 25, 2017
5N38
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BU of 5n38 by Molmil
S65DParkin and pUB complex
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, E3 ubiquitin-protein ligase parkin,E3 ubiquitin-protein ligase parkin, ...
Authors:Kumar, A, Chaugule, V.K, Johnson, C, Toth, R, Sundaramoorthy, R, Knebel, A, Walden, H.
Deposit date:2017-02-08
Release date:2017-04-19
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Parkin-phosphoubiquitin complex reveals cryptic ubiquitin-binding site required for RBR ligase activity.
Nat. Struct. Mol. Biol., 24, 2017
5N2W
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BU of 5n2w by Molmil
WT-Parkin and pUB complex
Descriptor: CHLORIDE ION, E3 ubiquitin-protein ligase parkin,E3 ubiquitin-protein ligase parkin, Polyubiquitin-B, ...
Authors:Kumar, A, Chaugule, V.K, Johnson, C, Toth, R, Sundaramoorthy, R, Knebel, A, Walden, H.
Deposit date:2017-02-08
Release date:2017-04-19
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Parkin-phosphoubiquitin complex reveals cryptic ubiquitin-binding site required for RBR ligase activity.
Nat. Struct. Mol. Biol., 24, 2017
1JYM
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BU of 1jym by Molmil
Crystals of Peptide Deformylase from Plasmodium falciparum with Ten Subunits per Asymmetric Unit Reveal Critical Characteristics of the Active Site for Drug Design
Descriptor: COBALT (II) ION, Peptide Deformylase
Authors:Kumar, A, Nguyen, K.T, Srivathsan, S, Ornstein, B, Turley, S, Hirsh, I, Pei, D, Hol, W.G.J.
Deposit date:2001-09-12
Release date:2002-03-13
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystals of peptide deformylase from Plasmodium falciparum reveal critical characteristics of the active site for drug design.
Structure, 10, 2002
3KK0
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BU of 3kk0 by Molmil
Crystal structure of partially folded intermediate state of peptidyl-tRNA hydrolase from Mycobacterium smegmatis
Descriptor: 1,2-ETHANEDIOL, BETA-MERCAPTOETHANOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Kumar, A, Singh, N, Yadav, R, Sharma, S, Arora, A, Singh, T.P.
Deposit date:2009-11-04
Release date:2010-11-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structures of Fully-Folded Native and Partially-Folded Intermediate States of Peptidyl-tRNA Hydrolase from Mycobacterium smegmatis
To be Published
7AG9
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BU of 7ag9 by Molmil
Structure of the Kar9 protein
Descriptor: Kar9
Authors:Kumar, A, prota, A.E, Steinmetz, M.O.
Deposit date:2020-09-22
Release date:2021-07-07
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure of the Kar9 protein
Structure, 2021
5OAT
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BU of 5oat by Molmil
PINK1 structure
Descriptor: MAGNESIUM ION, Serine/threonine-protein kinase PINK1, mitochondrial-like Protein
Authors:Kumar, A, Tamjar, J, Woodroof, H.I, Raimi, O.G, Waddell, A.Y, Peggie, M, Muqit, M.M.K, van Aalten, D.M.F.
Deposit date:2017-06-23
Release date:2017-10-11
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Structure of PINK1 and mechanisms of Parkinson's disease associated mutations.
Elife, 6, 2017

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数据于2025-07-23公开中

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