3NWR
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![BU of 3nwr by Molmil](/molmil-images/mine/3nwr) | Crystal structure of a rubisco-like protein from Burkholderia fungorum | Descriptor: | A rubisco-like protein, GLYCEROL, SULFATE ION | Authors: | Fedorov, A.A, Fedorov, E.V, Imker, H.J, Gerlt, J.A, Almo, S.C. | Deposit date: | 2010-07-10 | Release date: | 2010-07-28 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (1.498 Å) | Cite: | Crystal structure of a rubisco-like protein from Burkholderia fungorum To be Published
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3NWM
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![BU of 3nwm by Molmil](/molmil-images/mine/3nwm) | Crystal structure of a single chain construct composed of MHC class I H-2Kd, beta-2microglobulin and a peptide which is an autoantigen for type 1 diabetes | Descriptor: | Peptide/beta-2microglobulin/MHC class I H-2Kd chimeric protein | Authors: | Ramagopal, U.A, Samanta, D, Nathenson, S.G, Almo, S.C. | Deposit date: | 2010-07-09 | Release date: | 2011-07-06 | Last modified: | 2017-06-28 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Structural and functional characterization of a single-chain peptide-MHC molecule that modulates both naive and activated CD8+ T cells. Proc.Natl.Acad.Sci.USA, 108, 2011
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3OA4
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![BU of 3oa4 by Molmil](/molmil-images/mine/3oa4) | CRYSTAL STRUCTURE OF hypothetical protein BH1468 from Bacillus halodurans C-125 | Descriptor: | GLYCEROL, SULFATE ION, ZINC ION, ... | Authors: | Malashkevich, V.N, Patskovsky, Y, Garrett, S, Foti, R, Toro, R, Seidel, R, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC) | Deposit date: | 2010-08-04 | Release date: | 2010-08-18 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (1.94 Å) | Cite: | CRYSTAL STRUCTURE OF hypothetical protein BH1468 from Bacillus halodurans C-125 To be Published
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3QUQ
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![BU of 3quq by Molmil](/molmil-images/mine/3quq) | Crystal structure of pyrophosphatase from bacteroides thetaiotaomicron, an open cap conformation | Descriptor: | CHLORIDE ION, FORMIC ACID, INORGANIC PYROPHOSPHATASE, ... | Authors: | Patskovsky, Y, Huang, H, Toro, R, Gerlt, J.A, Burley, S.K, Dunaway-Mariano, D, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC), Enzyme Function Initiative (EFI) | Deposit date: | 2011-02-24 | Release date: | 2011-04-13 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | Divergence of Structure and Function in the Haloacid Dehalogenase Enzyme Superfamily: Bacteroides thetaiotaomicron BT2127 Is an Inorganic Pyrophosphatase. Biochemistry, 50, 2011
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3QU5
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![BU of 3qu5 by Molmil](/molmil-images/mine/3qu5) | Crystal structure of pyrophosphatase from bacteroides thetaiotaomicron, asp11asn mutant | Descriptor: | CHLORIDE ION, INORGANIC PYROPHOSPHATASE | Authors: | Patskovsky, Y, Huang, H, Toro, R, Gerlt, J.A, Burley, S.K, Dunaway-Mariano, D, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC), Enzyme Function Initiative (EFI) | Deposit date: | 2011-02-23 | Release date: | 2011-04-27 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (1.24 Å) | Cite: | Divergence of Structure and Function in the Haloacid Dehalogenase Enzyme Superfamily: Bacteroides thetaiotaomicron BT2127 Is an Inorganic Pyrophosphatase. Biochemistry, 50, 2011
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3QU2
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![BU of 3qu2 by Molmil](/molmil-images/mine/3qu2) | Crystal structure of pyrophosphatase from bacteroides thetaiotaomicron, a closed cap conformation | Descriptor: | CHLORIDE ION, CITRIC ACID, GLYCEROL, ... | Authors: | Patskovsky, Y, Huang, H, Toro, R, Gerlt, J.A, Burley, S.K, Dunaway-Mariano, D, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC), Enzyme Function Initiative (EFI) | Deposit date: | 2011-02-23 | Release date: | 2011-04-27 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (1.95 Å) | Cite: | Divergence of Structure and Function in the Haloacid Dehalogenase Enzyme Superfamily: Bacteroides thetaiotaomicron BT2127 Is an Inorganic Pyrophosphatase. Biochemistry, 50, 2011
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3QU7
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![BU of 3qu7 by Molmil](/molmil-images/mine/3qu7) | Crystal structure of pyrophosphatase from bacteroides thetaiotaomicron, asp13asn mutant complexed with calcium and phosphate | Descriptor: | ACETATE ION, CALCIUM ION, INORGANIC PYROPHOSPHATASE, ... | Authors: | Patskovsky, Y, Huang, H, Toro, R, Gerlt, J.A, Burley, S.K, Dunaway-Mariano, D, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC), Enzyme Function Initiative (EFI) | Deposit date: | 2011-02-23 | Release date: | 2011-04-27 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Divergence of Structure and Function in the Haloacid Dehalogenase Enzyme Superfamily: Bacteroides thetaiotaomicron BT2127 Is an Inorganic Pyrophosphatase. Biochemistry, 50, 2011
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3QUT
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![BU of 3qut by Molmil](/molmil-images/mine/3qut) | Crystal structure of pyrophosphatase from bacteroides thetaiotaomicron, asp13asn mutant, an open cap conformation | Descriptor: | CHLORIDE ION, D-MALATE, INORGANIC PYROPHOSPHATASE, ... | Authors: | Patskovsky, Y, Huang, H, Toro, R, Gerlt, J.A, Burley, S.K, Dunaway-Mariano, D, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC), Enzyme Function Initiative (EFI) | Deposit date: | 2011-02-24 | Release date: | 2011-04-13 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Divergence of Structure and Function in the Haloacid Dehalogenase Enzyme Superfamily: Bacteroides thetaiotaomicron BT2127 Is an Inorganic Pyrophosphatase. Biochemistry, 50, 2011
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3QYP
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![BU of 3qyp by Molmil](/molmil-images/mine/3qyp) | Crystal structure of pyrophosphatase from bacteroides thetaiotaomicron, glu47asn mutant complexed with calcium and phosphate | Descriptor: | CALCIUM ION, CHLORIDE ION, GLYCEROL, ... | Authors: | Patskovsky, Y, Huang, H, Toro, R, Gerlt, J.A, Burley, S.K, Dunaway-Mariano, D, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC), Enzyme Function Initiative (EFI) | Deposit date: | 2011-03-03 | Release date: | 2011-04-13 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Divergence of Structure and Function in the Haloacid Dehalogenase Enzyme Superfamily: Bacteroides thetaiotaomicron BT2127 Is an Inorganic Pyrophosphatase. Biochemistry, 50, 2011
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3QUC
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![BU of 3quc by Molmil](/molmil-images/mine/3quc) | Crystal structure of pyrophosphatase from bacteroides thetaiotaomicron, glu47asn mutant complexed with sulfate | Descriptor: | INORGANIC PYROPHOSPHATASE, SULFATE ION | Authors: | Patskovsky, Y, Huang, H, Toro, R, Gerlt, J.A, Burley, S.K, Dunaway-Mariano, D, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC), Enzyme Function Initiative (EFI) | Deposit date: | 2011-02-23 | Release date: | 2011-04-27 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Divergence of Structure and Function in the Haloacid Dehalogenase Enzyme Superfamily: Bacteroides thetaiotaomicron BT2127 Is an Inorganic Pyrophosphatase. Biochemistry, 50, 2011
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3OP2
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![BU of 3op2 by Molmil](/molmil-images/mine/3op2) | Crystal structure of putative mandelate racemase from Bordetella bronchiseptica RB50 complexed with 2-oxoglutarate/phosphate | Descriptor: | 2-OXOGLUTARIC ACID, MAGNESIUM ION, PHOSPHATE ION, ... | Authors: | Malashkevich, V.N, Patskovsky, Y, Ramagopal, U, Toro, R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC) | Deposit date: | 2010-08-31 | Release date: | 2010-09-15 | Last modified: | 2023-12-06 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Crystal structure of putative mandelate racemase from
Bordetella bronchiseptica RB50 complexed with 2-oxoglutarate/phosphate To be Published
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2L5L
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![BU of 2l5l by Molmil](/molmil-images/mine/2l5l) | Solution Structure of Thioredoxin from Bacteroides Vulgatus | Descriptor: | Thioredoxin | Authors: | Harris, R, Foti, R, Seidel, R.D, Bonanno, J.B, Freeman, J, Bain, K.T, Sauder, J.M, Burley, S.K, Girvin, M.E, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC), New York Structural Genomics Research Consortium (NYSGRC) | Deposit date: | 2010-11-02 | Release date: | 2010-11-24 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Solution Structure of Thioredoxin from Bacteroides Vulgatus To be Published
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3R09
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![BU of 3r09 by Molmil](/molmil-images/mine/3r09) | Crystal structure of probable HAD family hydrolase from Pseudomonas fluorescens Pf-5 with bound Mg | Descriptor: | Hydrolase, haloacid dehalogenase-like family, MAGNESIUM ION, ... | Authors: | Vetting, M.W, Patskovsky, Y, Toro, R, Freeman, J, Miller, S, Sauder, J.M, Burley, S.K, Dunaway-Mariano, D, Allen, K.N, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI), New York SGX Research Center for Structural Genomics (NYSGXRC) | Deposit date: | 2011-03-07 | Release date: | 2011-04-20 | Last modified: | 2023-12-06 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Crystal structure of probable HAD family hydrolase from Pseudomonas fluorescens Pf-5 with bound Mg To be Published
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3R0N
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![BU of 3r0n by Molmil](/molmil-images/mine/3r0n) | Crystal Structure of the Immunoglobulin variable domain of Nectin-2 | Descriptor: | CHLORIDE ION, MAGNESIUM ION, Poliovirus receptor-related protein 2 | Authors: | Ramagopal, U.A, Samanta, D, Nathenson, S.G, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN) | Deposit date: | 2011-03-08 | Release date: | 2011-04-27 | Last modified: | 2012-11-07 | Method: | X-RAY DIFFRACTION (1.3 Å) | Cite: | Structure of Nectin-2 reveals determinants of homophilic and heterophilic interactions that control cell-cell adhesion. Proc.Natl.Acad.Sci.USA, 109, 2012
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3R0U
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![BU of 3r0u by Molmil](/molmil-images/mine/3r0u) | Crystal structure of NYSGRC enolase target 200555, a putative dipeptide epimerase from Francisella philomiragia : Tartrate and Mg complex | Descriptor: | D(-)-TARTARIC ACID, Enzyme of enolase superfamily, GLYCEROL, ... | Authors: | Vetting, M.W, Hillerich, B, Seidel, R.D, Zencheck, W.D, Toro, R, Imker, H.J, Gerlt, J.A, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC) | Deposit date: | 2011-03-09 | Release date: | 2011-04-06 | Last modified: | 2012-03-28 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Homology models guide discovery of diverse enzyme specificities among dipeptide epimerases in the enolase superfamily. Proc.Natl.Acad.Sci.USA, 109, 2012
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3RDO
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![BU of 3rdo by Molmil](/molmil-images/mine/3rdo) | Crystal structure of R7-2 streptavidin complexed with biotin | Descriptor: | BIOTIN, GLYCEROL, NICKEL (II) ION, ... | Authors: | Malashkevich, V.N, Magalhaes, M, Czecster, C.M, Guan, R, Levy, M, Almo, S.C. | Deposit date: | 2011-04-01 | Release date: | 2011-07-06 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (1.404 Å) | Cite: | Evolved streptavidin mutants reveal key role of loop residue in high-affinity binding. Protein Sci., 20, 2011
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3RE5
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![BU of 3re5 by Molmil](/molmil-images/mine/3re5) | Crystal structure of R4-6 streptavidin | Descriptor: | GLYCEROL, PENTAETHYLENE GLYCOL, Streptavidin | Authors: | Malashkevich, V.N, Magalhaes, M, Czecster, C.M, Guan, R, Levy, M, Almo, S.C. | Deposit date: | 2011-04-02 | Release date: | 2011-07-06 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (1.949 Å) | Cite: | Evolved streptavidin mutants reveal key role of loop residue in high-affinity binding. Protein Sci., 20, 2011
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3R6A
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![BU of 3r6a by Molmil](/molmil-images/mine/3r6a) | |
3RLU
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![BU of 3rlu by Molmil](/molmil-images/mine/3rlu) | Crystal structure of the mutant K82A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with the inhibitor BMP | Descriptor: | 6-HYDROXYURIDINE-5'-PHOSPHATE, GLYCEROL, Orotidine 5'-phosphate decarboxylase | Authors: | Fedorov, A.A, Fedorov, E.V, Desai, B, Gerlt, J.A, Almo, S.C. | Deposit date: | 2011-04-20 | Release date: | 2012-04-25 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (1.49 Å) | Cite: | Conformational changes in orotidine 5'-monophosphate decarboxylase: a structure-based explanation for how the 5'-phosphate group activates the enzyme. Biochemistry, 51, 2012
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3RMT
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![BU of 3rmt by Molmil](/molmil-images/mine/3rmt) | Crystal structure of putative 5-enolpyruvoylshikimate-3-phosphate synthase from Bacillus halodurans C-125 | Descriptor: | 3-phosphoshikimate 1-carboxyvinyltransferase 1, SULFATE ION | Authors: | Malashkevich, V.N, Toro, R, Seidel, R, Ramagopal, U, Zencheck, W, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC) | Deposit date: | 2011-04-21 | Release date: | 2011-05-18 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Crystal structure of putative 5-enolpyruvoylshikimate-3-phosphate synthase from Bacillus halodurans C-125 To be Published
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3RP1
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![BU of 3rp1 by Molmil](/molmil-images/mine/3rp1) | Crystal structure of Human LAIR-1 in C2 space group | Descriptor: | Leukocyte-associated immunoglobulin-like receptor 1 | Authors: | Sampathkumar, P, Ramagopal, U.A, Yan, Q, Toro, R, Nathenson, S, Bonanno, J, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC) | Deposit date: | 2011-04-26 | Release date: | 2011-06-15 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | Crystal structure of Human LAIR-1 in C2 space group To be Published
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3R25
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![BU of 3r25 by Molmil](/molmil-images/mine/3r25) | Crystal structure of enolase superfamily member from Vibrionales bacterium complexed with Mg and Glycerol in the active site | Descriptor: | GLYCEROL, MAGNESIUM ION, mandelate racemase / muconate lactonizing enzyme | Authors: | Fedorov, A.A, Fedorov, E.V, Wichelecki, D, Gerlt, J.A, Almo, S.C. | Deposit date: | 2011-03-13 | Release date: | 2012-03-14 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (1.603 Å) | Cite: | Crystal structure of enolase superfamily member from VIBRIONALES BACTERIUM complexed with Mg and Glycerol in the active site To be Published
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3R64
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![BU of 3r64 by Molmil](/molmil-images/mine/3r64) | |
3RDS
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![BU of 3rds by Molmil](/molmil-images/mine/3rds) | Crystal structure of the refolded R7-2 streptavidin | Descriptor: | PENTAETHYLENE GLYCOL, Streptavidin | Authors: | Malashkevich, V.N, Magalhaes, M, Czecster, C.M, Guan, R, Levy, M, Almo, S.C. | Deposit date: | 2011-04-01 | Release date: | 2011-07-06 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Evolved streptavidin mutants reveal key role of loop residue in high-affinity binding. Protein Sci., 20, 2011
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2LS5
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![BU of 2ls5 by Molmil](/molmil-images/mine/2ls5) | Solution structure of a putative protein disulfide isomerase from Bacteroides thetaiotaomicron | Descriptor: | Uncharacterized protein | Authors: | Harris, R, Bandaranayake, A.D, Banu, R, Bonanno, J.B, Calarese, D.A, Celikgil, A, Chamala, S, Chan, M.K, Chaparro, R, Evans, B, Garforth, S, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Lim, S, Love, J, Matikainen, B, Patel, H, Seidel, R.D, Smith, B, Stead, M, Girvin, M.E, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC) | Deposit date: | 2012-04-20 | Release date: | 2012-05-09 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | Solution structure of a putative protein disulfide isomerase from Bacteroides thetaiotaomicron To be Published
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