Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3ACA
DownloadVisualize
BU of 3aca by Molmil
Crystal structure of human NUDT5 complexed with 8-oxo-dADP and manganese
Descriptor: 8-oxo-7,8-dihydro-2'-deoxy-adenosine-5'-diphosphate, ADP-sugar pyrophosphatase, MANGANESE (II) ION
Authors:Arimori, T, Yamagata, Y.
Deposit date:2009-12-30
Release date:2011-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Diverse substrate recognition and hydrolysis mechanisms of human NUDT5
Nucleic Acids Res., 39, 2011
3AML
DownloadVisualize
BU of 3aml by Molmil
Structure of the Starch Branching Enzyme I (BEI) from Oryza sativa L
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, BETA-MERCAPTOETHANOL, ...
Authors:Kakuta, Y, Chaen, K, Noguchi, J, Vu, N, Kimura, M.
Deposit date:2010-08-20
Release date:2011-09-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of the branching enzyme I (BEI) from Oryza sativa L with implications for catalysis and substrate binding.
Glycobiology, 21, 2011
3ANR
DownloadVisualize
BU of 3anr by Molmil
human DYRK1A/harmine complex
Descriptor: 7-METHOXY-1-METHYL-9H-BETA-CARBOLINE, Dual specificity tyrosine-phosphorylation-regulated kinase 1A
Authors:Nonaka, Y, Hosoya, T, Hagiwara, M, Ito, N.
Deposit date:2010-09-06
Release date:2010-11-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Development of a novel selective inhibitor of the Down syndrome-related kinase Dyrk1A
Nat Commun, 1, 2010
3AMK
DownloadVisualize
BU of 3amk by Molmil
Structure of the Starch Branching Enzyme I (BEI) from Oryza sativa L
Descriptor: GLYCEROL, Os06g0726400 protein, PHOSPHATE ION
Authors:Kakuta, Y, Chaen, K, Noguchi, J, Vu, N, Kimura, M.
Deposit date:2010-08-20
Release date:2011-09-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the branching enzyme I (BEI) from Oryza sativa L with implications for catalysis and substrate binding.
Glycobiology, 21, 2011
3ANQ
DownloadVisualize
BU of 3anq by Molmil
human DYRK1A/inhibitor complex
Descriptor: (1Z)-1-(3-ethyl-5-hydroxy-1,3-benzothiazol-2(3H)-ylidene)propan-2-one, Dual specificity tyrosine-phosphorylation-regulated kinase 1A
Authors:Nonaka, Y, Hosoya, T, Hagiwara, M, Ito, N.
Deposit date:2010-09-06
Release date:2010-11-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Development of a novel selective inhibitor of the Down syndrome-related kinase Dyrk1A
Nat Commun, 1, 2010
3AC9
DownloadVisualize
BU of 3ac9 by Molmil
Crystal structure of human NUDT5 complexed with 8-oxo-dGDP and manganese
Descriptor: 2'-deoxy-8-oxoguanosine 5'-(trihydrogen diphosphate), ADP-sugar pyrophosphatase, MANGANESE (II) ION
Authors:Arimori, T, Yamagata, Y.
Deposit date:2009-12-30
Release date:2011-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Diverse substrate recognition and hydrolysis mechanisms of human NUDT5
Nucleic Acids Res., 39, 2011
2DF3
DownloadVisualize
BU of 2df3 by Molmil
The structure of Siglec-7 in complex with alpha(2,3)/alpha(2,6) disialyl lactotetraosyl 2-(trimethylsilyl)ethyl
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CYSTEINE, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-[N-acetyl-alpha-neuraminic acid-(2-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Attrill, H.
Deposit date:2006-02-23
Release date:2006-06-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The structure of siglec-7 in complex with sialosides: leads for rational structure-based inhibitor design
Biochem.J., 397, 2006
2YRF
DownloadVisualize
BU of 2yrf by Molmil
Crystal structure of 5-methylthioribose 1-phosphate isomerase from Bacillus subtilis complexed with sulfate ion
Descriptor: Methylthioribose-1-phosphate isomerase, SULFATE ION
Authors:Tamura, H, Inoue, T, Kai, Y, Matsumura, H.
Deposit date:2007-04-02
Release date:2008-01-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of 5-methylthioribose 1-phosphate isomerase product complex from Bacillus subtilis: Implications for catalytic mechanism
Protein Sci., 17, 2008
2BJA
DownloadVisualize
BU of 2bja by Molmil
Crystal Analysis of 1-Pyrroline-5-Carboxylate Dehydrogenase from Thermus with bound NADH
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE, ...
Authors:Inagaki, E, Tahirov, T.H.
Deposit date:2005-02-01
Release date:2006-03-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Thermus Thermophilus Delta1-Pyrroline-5-Carboxylate Dehydrogenase.
J.Mol.Biol., 362, 2006
2BJK
DownloadVisualize
BU of 2bjk by Molmil
Crystal Analysis of 1-Pyrroline-5-Carboxylate Dehydrogenase from Thermus with bound NAD and citrate.
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE, ...
Authors:Inagaki, E, Tahirov, T.H.
Deposit date:2005-02-04
Release date:2006-03-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structure of Thermus Thermophilus Delta(1)- Pyrroline-5-Carboxylate Dehydrogenase.
J.Mol.Biol., 362, 2006
2BHQ
DownloadVisualize
BU of 2bhq by Molmil
Crystal Analysis of 1-Pyrroline-5-Carboxylate Dehydrogenase from Thermus with bound product glutamate.
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE, ...
Authors:Inagaki, E, Tahirov, T.H.
Deposit date:2005-01-16
Release date:2006-03-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structure of Thermus Thermophilus Delta(1)- Pyrroline-5-Carboxylate Dehydrogenase.
J.Mol.Biol., 362, 2006
2BHP
DownloadVisualize
BU of 2bhp by Molmil
Crystal Analysis of 1-Pyrroline-5-Carboxylate Dehydrogenase from Thermus with bound NAD.
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE, ...
Authors:Inagaki, E, Tahirov, T.H.
Deposit date:2005-01-16
Release date:2006-03-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Thermus Thermophilus Delta(1)- Pyrroline-5-Carboxylate Dehydrogenase.
J.Mol.Biol., 362, 2006
2ZPX
DownloadVisualize
BU of 2zpx by Molmil
TNF Receptor Subtype One-selective TNF Mutant with Antagonistic Activity; R1antTNF-T8
Descriptor: Tumor necrosis factor
Authors:Mukai, Y, Nakamura, T, Yamagata, Y, Tsutsumi, Y.
Deposit date:2008-07-29
Release date:2009-03-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Fast binding kinetics and conserved 3D structure underlie the antagonistic activity of mutant TNF: useful information for designing artificial proteo-antagonists
J.Biochem., 146, 2009
2ZVI
DownloadVisualize
BU of 2zvi by Molmil
Crystal structure of 2,3-diketo-5-methylthiopentyl-1-phosphate enolase from Bacillus subtilis
Descriptor: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase
Authors:Tamura, H, Yadani, T, Kai, Y, Inoue, T, Matsumura, H.
Deposit date:2008-11-07
Release date:2009-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the apo decarbamylated form of 2,3-diketo-5-methylthiopentyl-1-phosphate enolase from Bacillus subtilis
Acta Crystallogr.,Sect.D, 65, 2009
2YVK
DownloadVisualize
BU of 2yvk by Molmil
Crystal structure of 5-methylthioribose 1-phosphate isomerase product complex from Bacillus subtilis
Descriptor: 5-S-METHYL-1-O-PHOSPHONO-5-THIO-D-RIBULOSE, Methylthioribose-1-phosphate isomerase
Authors:Tamura, H, Inoue, T, Kai, Y, Matsumura, H.
Deposit date:2007-04-13
Release date:2008-01-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of 5-methylthioribose 1-phosphate isomerase product complex from Bacillus subtilis: Implications for catalytic mechanism
Protein Sci., 17, 2008
2ZJC
DownloadVisualize
BU of 2zjc by Molmil
TNFR1 selectve TNF mutant; R1-6
Descriptor: GLYCEROL, Tumor necrosis factor
Authors:Mukai, Y, Yamagata, Y, Tsutsumi, Y.
Deposit date:2008-03-05
Release date:2009-01-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-Function Relationship of Tumor Necrosis Factor (TNF) and Its Receptor Interaction Based on 3D Structural Analysis of a Fully Active TNFR1-Selective TNF Mutant
J.Mol.Biol., 385, 2009
3ATK
DownloadVisualize
BU of 3atk by Molmil
Crystal structure of trypsin complexed with cycloheptanamine
Descriptor: CALCIUM ION, Cationic trypsin, DIMETHYL SULFOXIDE, ...
Authors:Yamane, J, Yao, M, Tanaka, I.
Deposit date:2011-01-05
Release date:2011-08-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:In-crystal affinity ranking of fragment hit compounds reveals a relationship with their inhibitory activities
J.Appl.Crystallogr., 44, 2011
3AUJ
DownloadVisualize
BU of 3auj by Molmil
Structure of diol dehydratase complexed with glycerol
Descriptor: CALCIUM ION, COBALAMIN, Diol dehydrase alpha subunit, ...
Authors:Yamanishi, M, Kinoshita, K, Fukuoka, M, Shibata, T, Tobimatsu, T, Toraya, T.
Deposit date:2011-02-07
Release date:2012-02-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Redesign of coenzyme B(12) dependent diol dehydratase to be resistant to the mechanism-based inactivation by glycerol and act on longer chain 1,2-diols
Febs J., 279, 2012
3ATI
DownloadVisualize
BU of 3ati by Molmil
Crystal structure of trypsin complexed with (3-methoxyphenyl)methanamine
Descriptor: 1-(3-methoxyphenyl)methanamine, CALCIUM ION, Cationic trypsin, ...
Authors:Yamane, J, Yao, M, Tanaka, I.
Deposit date:2011-01-05
Release date:2011-08-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:In-crystal affinity ranking of fragment hit compounds reveals a relationship with their inhibitory activities
J.Appl.Crystallogr., 44, 2011
3ATM
DownloadVisualize
BU of 3atm by Molmil
Crystal structure of trypsin complexed with 2-(1H-indol-3-yl)ethanamine
Descriptor: 2-(1H-INDOL-3-YL)ETHANAMINE, CALCIUM ION, Cationic trypsin, ...
Authors:Yamane, J, Yao, M, Tanaka, I.
Deposit date:2011-01-05
Release date:2011-08-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:In-crystal affinity ranking of fragment hit compounds reveals a relationship with their inhibitory activities
J.Appl.Crystallogr., 44, 2011
2DQ7
DownloadVisualize
BU of 2dq7 by Molmil
Crystal Structure of Fyn kinase domain complexed with staurosporine
Descriptor: Proto-oncogene tyrosine-protein kinase Fyn, STAUROSPORINE
Authors:Kinoshita, T, Tada, T.
Deposit date:2006-05-23
Release date:2006-07-04
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of human Fyn kinase domain complexed with staurosporine.
Biochem.Biophys.Res.Commun., 346, 2006
2ZOQ
DownloadVisualize
BU of 2zoq by Molmil
Structural dissection of human mitogen-activated kinase ERK1
Descriptor: (2R,3R,4S,5R)-2-(4-AMINO-5-IODO-7H-PYRROLO[2,3-D]PYRIMIDIN-7-YL)-5-(HYDROXYMETHYL)TETRAHYDROFURAN-3,4-DIOL, Mitogen-activated protein kinase 3, SODIUM ION, ...
Authors:Kinoshita, T, Tada, T, Nakae, S, Yoshida, I.
Deposit date:2008-06-01
Release date:2009-04-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Crystal structure of human mono-phosphorylated ERK1 at Tyr204
Biochem.Biophys.Res.Commun., 377, 2008
3ATL
DownloadVisualize
BU of 3atl by Molmil
Crystal structure of trypsin complexed with benzamidine
Descriptor: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Yamane, J, Yao, M, Tanaka, I.
Deposit date:2011-01-05
Release date:2011-08-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:In-crystal affinity ranking of fragment hit compounds reveals a relationship with their inhibitory activities
J.Appl.Crystallogr., 44, 2011
2ZEQ
DownloadVisualize
BU of 2zeq by Molmil
Crystal structure of ubiquitin-like domain of murine Parkin
Descriptor: E3 ubiquitin-protein ligase parkin
Authors:Tomoo, K.
Deposit date:2007-12-14
Release date:2008-08-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure and molecular dynamics simulation of ubiquitin-like domain of murine parkin
Biochim.Biophys.Acta, 1784, 2008
2YZ1
DownloadVisualize
BU of 2yz1 by Molmil
Crystal structure of the ligand-binding domain of murine SHPS-1/SIRP alpha
Descriptor: Tyrosine-protein phosphatase non-receptor type substrate 1
Authors:Nakaishi, A.
Deposit date:2007-05-02
Release date:2007-12-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural insight into the specific interaction between murine SHPS-1/SIRP alpha and its ligand CD47
J.Mol.Biol., 375, 2008

223166

건을2024-07-31부터공개중

PDB statisticsPDBj update infoContact PDBjnumon