Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3UDV
DownloadVisualize
BU of 3udv by Molmil
Crystal structure of E. coli HPPK in complex with bisubstrate analogue inhibitor J1C
Descriptor: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, 5'-S-[1-(2-{[(2-amino-7,7-dimethyl-4-oxo-3,4,7,8-tetrahydropteridin-6-yl)carbonyl]amino}ethyl)piperidin-4-yl]-5'-thioadenosine, ACETATE ION
Authors:Shaw, G, Shi, G, Ji, X.
Deposit date:2011-10-28
Release date:2012-01-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Bisubstrate analogue inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: New design with improved properties.
Bioorg.Med.Chem., 20, 2012
5O6V
DownloadVisualize
BU of 5o6v by Molmil
The cryo-EM structure of Tick-borne encephalitis virus complexed with Fab fragment of neutralizing antibody 19/1786
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein, Fab 19/1786 - Heavy chain, ...
Authors:Fuzik, T, Plevka, P.
Deposit date:2017-06-07
Release date:2018-02-07
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure of tick-borne encephalitis virus and its neutralization by a monoclonal antibody.
Nat Commun, 9, 2018
6GRZ
DownloadVisualize
BU of 6grz by Molmil
Crystal structure of the light chain dimer mH6
Descriptor: GLYCEROL, mH6
Authors:Maritan, M, Ricagno, S, Ambrosetti, A, Oberti, L.
Deposit date:2018-06-13
Release date:2019-06-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Inherent Biophysical Properties Modulate the Toxicity of Soluble Amyloidogenic Light Chains
J.Mol.Biol., 2020
5VJ2
DownloadVisualize
BU of 5vj2 by Molmil
Structure of human respiratory syncytial virus non-structural protein 1 (NS1)
Descriptor: 1,4-DIETHYLENE DIOXIDE, CHLORIDE ION, GLYCEROL, ...
Authors:Leung, D.W, Borek, D.M, Amarasinghe, G.K.
Deposit date:2017-04-18
Release date:2017-07-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structural basis for human respiratory syncytial virus NS1-mediated modulation of host responses.
Nat Microbiol, 2, 2017
5WHR
DownloadVisualize
BU of 5whr by Molmil
Discovery of a novel and selective IDO-1 inhibitor PF-06840003 and its characterization as a potential clinical candidate.
Descriptor: (3R)-3-(5-fluoro-1H-indol-3-yl)pyrrolidine-2,5-dione, Indoleamine 2,3-dioxygenase 1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Greasley, S.E, Kaiser, S.E, Feng, J.L, Stewart, A.
Deposit date:2017-07-18
Release date:2017-12-27
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Discovery of a Novel and Selective Indoleamine 2,3-Dioxygenase (IDO-1) Inhibitor 3-(5-Fluoro-1H-indol-3-yl)pyrrolidine-2,5-dione (EOS200271/PF-06840003) and Its Characterization as a Potential Clinical Candidate.
J. Med. Chem., 60, 2017
1DVT
DownloadVisualize
BU of 1dvt by Molmil
CRYSTAL STRUCTURE OF HUMAN TRANSTHYRETIN IN COMPLEX WITH FLURBIPROFEN
Descriptor: FLURBIPROFEN, TRANSTHYRETIN
Authors:Klabunde, T, Petrassi, H.M, Oza, V.B, Kelly, J.W, Sacchettini, J.C.
Deposit date:2000-01-22
Release date:2001-01-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Rational design of potent human transthyretin amyloid disease inhibitors.
Nat.Struct.Biol., 7, 2000
1DVY
DownloadVisualize
BU of 1dvy by Molmil
CRYSTAL STRUCTURE OF TRANSTHYRETIN IN COMPLEX WITH N-(M-TRIFLUOROMETHYLPHENYL) PHENOXAZINE-4,6-DICARBOXYLIC ACID
Descriptor: N-(M-TRIFLUOROMETHYLPHENYL) PHENOXAZINE-4,6-DICARBOXYLIC ACID, TRANSTHYRETIN
Authors:Klabunde, T, Petrassi, H.M, Oza, V.B, Kelly, J.W, Sacchettini, J.C.
Deposit date:2000-01-23
Release date:2001-01-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Rational design of potent human transthyretin amyloid disease inhibitors.
Nat.Struct.Biol., 7, 2000
5OQ4
DownloadVisualize
BU of 5oq4 by Molmil
PQR309 - a Potent, Brain-Penetrant, Orally Bioavailable, pan-Class I PI3K/mTOR Inhibitor as Clinical Candidate in Oncology
Descriptor: 5-(4,6-dimorpholin-4-yl-1,3,5-triazin-2-yl)-4-(trifluoromethyl)pyridin-2-amine, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform, SULFATE ION
Authors:Williams, R.L, Zhang, X.
Deposit date:2017-08-10
Release date:2017-09-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:5-(4,6-Dimorpholino-1,3,5-triazin-2-yl)-4-(trifluoromethyl)pyridin-2-amine (PQR309), a Potent, Brain-Penetrant, Orally Bioavailable, Pan-Class I PI3K/mTOR Inhibitor as Clinical Candidate in Oncology.
J. Med. Chem., 60, 2017
5G1D
DownloadVisualize
BU of 5g1d by Molmil
The complex structure of syntenin-1 PDZ domain with c-terminal extension
Descriptor: SYNDECAN-4, SYNTENIN-1
Authors:Lee, I, Kim, H, Yun, J.H, Lee, W.
Deposit date:2016-03-25
Release date:2016-11-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:New Structural Insight of C-Terminal Region of Syntenin-1, Enhancing the Molecular Dimerization and Inhibitory Function Related on Syndecan-4 Signaling.
Sci.Rep., 6, 2016
5J60
DownloadVisualize
BU of 5j60 by Molmil
Structure of a thioredoxin reductase from Gloeobacter violaceus
Descriptor: CALCIUM ION, FLAVIN-ADENINE DINUCLEOTIDE, TETRAETHYLENE GLYCOL, ...
Authors:Buey, R.M, de Pereda, J.M, Balsera, M.
Deposit date:2016-04-04
Release date:2016-07-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A New Member of the Thioredoxin Reductase Family from Early Oxygenic Photosynthetic Organisms.
Mol Plant, 10, 2017
6B4W
DownloadVisualize
BU of 6b4w by Molmil
TTK in Complex with Inhibitor
Descriptor: 4-{[4-(cyclopentyloxy)-5-(2-methyl-1,3-benzoxazol-6-yl)-7H-pyrrolo[2,3-d]pyrimidin-2-yl]amino}-3-methoxy-N-methylbenzamide, CACODYLATE ION, Dual specificity protein kinase TTK
Authors:Delker, S, Chamberlain, P.P.
Deposit date:2017-09-27
Release date:2017-10-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The Discovery of a Dual TTK Protein Kinase/CDC2-Like Kinase (CLK2) Inhibitor for the Treatment of Triple Negative Breast Cancer Initiated from a Phenotypic Screen.
J. Med. Chem., 60, 2017
8SZ3
DownloadVisualize
BU of 8sz3 by Molmil
Structure of human beta 1,3-N-acetylglucosaminyltransferase 2 with compound 7j
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, N-[(1S)-1-(5-bromopyridin-2-yl)ethyl]-3-[(2R)-3,3-dimethylbutan-2-yl]-2-oxo-2,3-dihydro-1H-benzimidazole-5-carboxamide, ...
Authors:Sudom, A, Min, X.
Deposit date:2023-05-26
Release date:2023-12-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Imidazolone as an Amide Bioisostere in the Development of beta-1,3- N -Acetylglucosaminyltransferase 2 (B3GNT2) Inhibitors.
J.Med.Chem., 66, 2023
6TAM
DownloadVisualize
BU of 6tam by Molmil
X-RAY STRUCTURE OF HUMAN K-RAS G12C IN COMPLEX WITH COVALENT ISOQUINOLINONE INHIBITOR (COMPOUND 3)
Descriptor: 7-[2,4-bis(fluoranyl)phenyl]-3-[(3~{R})-1-propanoylpyrrolidin-3-yl]-4~{H}-isoquinolin-1-one, GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Friberg, A, Nguyen, D.
Deposit date:2019-10-30
Release date:2020-04-08
Last modified:2020-06-03
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Computationally Empowered Workflow Identifies Novel Covalent Allosteric Binders for KRASG12C.
Chemmedchem, 15, 2020
6TAN
DownloadVisualize
BU of 6tan by Molmil
X-RAY STRUCTURE OF HUMAN K-RAS G12C IN COMPLEX WITH COVALENT ISOQUINOLINONE INHIBITOR (COMPOUND 17)
Descriptor: 7-(2-fluoranyl-6-oxidanyl-phenyl)-3-[(3~{R})-1-propanoylpyrrolidin-3-yl]-4~{H}-2,6-naphthyridin-1-one, GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Hillig, R.C, Eis, K, Badock, V.
Deposit date:2019-10-30
Release date:2020-04-08
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Computationally Empowered Workflow Identifies Novel Covalent Allosteric Binders for KRASG12C.
Chemmedchem, 15, 2020
8TBP
DownloadVisualize
BU of 8tbp by Molmil
HLA-DRB1*15:01 in complex with smith antigen
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, HLA class II histocompatibility antigen, DR alpha chain, ...
Authors:Ting, Y.T, Broury, A, Ooi, J.
Deposit date:2023-06-29
Release date:2024-02-21
Method:X-RAY DIFFRACTION (3.12621117 Å)
Cite:Smith-specific regulatory T cells halt the progression of lupus nephritis.
Nat Commun, 15, 2024
6GQ3
DownloadVisualize
BU of 6gq3 by Molmil
Human asparagine synthetase (ASNS) in complex with 6-diazo-5-oxo-L-norleucine (DON) at 1.85 A resolution
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5-OXO-L-NORLEUCINE, ...
Authors:Zhu, W, Radadiya, A, Bisson, C, Jin, Y, Nordin, B.E, Imasaki, T, Wenzel, S, Sedelnikova, S.E, Berry, A.H, Nomanbhoy, T.K, Kozarich, J.W, Takagi, Y, Rice, D.W, Richards, N.G.J.
Deposit date:2018-06-07
Release date:2019-09-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:High-resolution crystal structure of human asparagine synthetase enables analysis of inhibitor binding and selectivity.
Commun Biol, 2, 2019
8Q1K
DownloadVisualize
BU of 8q1k by Molmil
Structural analysis of PLD3 reveals insights into the mechanism of lysosomal 5' exonuclease-mediated nucleic acid degradation
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5'-3' exonuclease PLD3, ...
Authors:Roske, Y, Daumke, O, Damme, M.
Deposit date:2023-07-31
Release date:2023-12-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Structural analysis of PLD3 reveals insights into the mechanism of lysosomal 5' exonuclease-mediated nucleic acid degradation.
Nucleic Acids Res., 52, 2024
8Q1X
DownloadVisualize
BU of 8q1x by Molmil
Structural analysis of PLD3 reveals insights into the mechanism of lysosomal 5' exonuclease-mediated nucleic acid degradation
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5'-3' exonuclease PLD3, ...
Authors:Roske, Y, Daumke, O, Damme, M.
Deposit date:2023-08-01
Release date:2023-12-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural analysis of PLD3 reveals insights into the mechanism of lysosomal 5' exonuclease-mediated nucleic acid degradation.
Nucleic Acids Res., 52, 2024
5JTA
DownloadVisualize
BU of 5jta by Molmil
Neutral trehalase Nth1 from Saccharomyces cerevisiae
Descriptor: Neutral trehalase
Authors:Alblova, M, Smidova, A, Obsilova, V, Obsil, T.
Deposit date:2016-05-09
Release date:2017-11-01
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Molecular basis of the 14-3-3 protein-dependent activation of yeast neutral trehalase Nth1.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5K0A
DownloadVisualize
BU of 5k0a by Molmil
Structure of an oxidoreductase from Synechocystis sp. PCC6803
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NITRATE ION, PENTAETHYLENE GLYCOL, ...
Authors:Buey, R.M, de Pereda, J.M, Balsera, M.
Deposit date:2016-05-17
Release date:2017-11-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.706 Å)
Cite:Unprecedented pathway of reducing equivalents in a diflavin-linked disulfide oxidoreductase.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5K4P
DownloadVisualize
BU of 5k4p by Molmil
Catalytic Domain of MCR-1 phosphoethanolamine transferase
Descriptor: Probable phosphatidylethanolamine transferase Mcr-1, ZINC ION, sorbitol
Authors:Stojanoski, V, Palzkill, T, Prasad, B.V.V, Sankaran, B.
Deposit date:2016-05-21
Release date:2016-08-31
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.318 Å)
Cite:Structure of the catalytic domain of the colistin resistance enzyme MCR-1.
Bmc Biol., 14, 2016
8TU2
DownloadVisualize
BU of 8tu2 by Molmil
The Capsid of Rat Bocavirus
Descriptor: VP2
Authors:Velez, M, Mietzsch, M, McKenna, R.
Deposit date:2023-08-15
Release date:2023-08-30
Last modified:2023-10-11
Method:ELECTRON MICROSCOPY (2.52 Å)
Cite:Structural Characterization of Canine Minute Virus, Rat and Porcine Bocavirus.
Viruses, 15, 2023
8TU1
DownloadVisualize
BU of 8tu1 by Molmil
The Capsid of Porcine Bocavirus 1
Descriptor: VP2
Authors:Velez, M, Mietzsch, M, McKenna, R.
Deposit date:2023-08-15
Release date:2023-08-30
Last modified:2023-10-11
Method:ELECTRON MICROSCOPY (2.31 Å)
Cite:Structural Characterization of Canine Minute Virus, Rat and Porcine Bocavirus.
Viruses, 15, 2023
8TU0
DownloadVisualize
BU of 8tu0 by Molmil
The Capsid of Canine Minute Virus
Descriptor: VP2
Authors:Velez, M, Mietzsch, M, McKenna, R.
Deposit date:2023-08-15
Release date:2023-08-30
Last modified:2023-10-11
Method:ELECTRON MICROSCOPY (2.72 Å)
Cite:Structural Characterization of Canine Minute Virus, Rat and Porcine Bocavirus.
Viruses, 15, 2023
5JRI
DownloadVisualize
BU of 5jri by Molmil
Structure of an oxidoreductase SeMet-labelled from Synechocystis sp. PCC6803
Descriptor: 1,2-ETHANEDIOL, FLAVIN-ADENINE DINUCLEOTIDE, Pyridine nucleotide-disulfide oxidoreductase, ...
Authors:Buey, R.M, de Pereda, J.M, Balsera, M.
Deposit date:2016-05-06
Release date:2017-11-15
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.952 Å)
Cite:Unprecedented pathway of reducing equivalents in a diflavin-linked disulfide oxidoreductase.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017

225946

건을2024-10-09부터공개중

PDB statisticsPDBj update infoContact PDBjnumon