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5OAI
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BU of 5oai by Molmil
Structure of MDM2 with low molecular weight inhibitor
Descriptor: 3-[(1~{R})-2-(~{tert}-butylamino)-1-[methanoyl-[[3,4,5-tris(fluoranyl)phenyl]methyl]amino]-2-oxidanylidene-ethyl]-6-chloranyl-1~{H}-indole-2-carboxylic acid, E3 ubiquitin-protein ligase Mdm2
Authors:Twarda-Clapa, A, Neochoritis, C.G, Grudnik, P, Dubin, G, Domling, A, Holak, T.A.
Deposit date:2017-06-22
Release date:2019-02-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:A fluorinated indole-based MDM2 antagonist selectively inhibits the growth of p53wtosteosarcoma cells.
Febs J., 286, 2019
4BWB
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BU of 4bwb by Molmil
Structure of Evolved Agonist-bound Neurotensin Receptor 1 Mutant without Lysozyme Fusion
Descriptor: NEUROTENSIN, NEUROTENSIN RECEPTOR TYPE 1
Authors:Egloff, P, Hillenbrand, M, Scott, D.J, Schlinkmann, K.M, Heine, P, Balada, S, Batyuk, A, Mittl, P, Plueckthun, A.
Deposit date:2013-07-01
Release date:2014-01-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.57 Å)
Cite:Structure of Signaling-Competent Neurotensin Receptor 1 Obtained by Directed Evolution in Escherichia Coli
Proc.Natl.Acad.Sci.USA, 111, 2014
3FMA
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BU of 3fma by Molmil
Crystal structure of the GYF domain of Smy2 in complex with a proline-rich peptide from BBP/ScSF1
Descriptor: Branchpoint-bridging protein, Protein SMY2
Authors:Ash, M.R, Faelber, K.
Deposit date:2008-12-19
Release date:2009-12-22
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:SMY2-type GYF domain recognition in mRNA surveillance complexes
to be published
2HQ6
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BU of 2hq6 by Molmil
Structure of the Cyclophilin_CeCYP16-Like Domain of the Serologically Defined Colon Cancer Antigen 10 from Homo Sapiens
Descriptor: GLYCEROL, IODIDE ION, Serologically defined colon cancer antigen 10
Authors:Walker, J.R, Davis, T, Paramanathan, R, Newman, E.M, Finerty Jr, P.J, Mackenzie, F, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
Deposit date:2006-07-18
Release date:2006-08-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural and biochemical characterization of the human cyclophilin family of peptidyl-prolyl isomerases.
PLoS Biol., 8, 2010
4YTC
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BU of 4ytc by Molmil
Discovery of VX-509 (Decernotinib): A Potent and Selective Janus kinase (JAK) 3 Inhibitor for the Treatment of Autoimmune Disease
Descriptor: N~3~-phenyl-1-[6-(phenylamino)pyrimidin-4-yl]-1H-1,2,4-triazole-3,5-diamine, Tyrosine-protein kinase JAK2
Authors:Zuccola, H.J, Ledeboer, M.
Deposit date:2015-03-17
Release date:2015-08-12
Last modified:2015-10-07
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Discovery of VX-509 (Decernotinib): A Potent and Selective Janus Kinase 3 Inhibitor for the Treatment of Autoimmune Diseases.
J.Med.Chem., 58, 2015
4C47
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BU of 4c47 by Molmil
Salmonella enterica trimeric lipoprotein SadB
Descriptor: INNER MEMBRANE LIPOPROTEIN
Authors:Grin, I, Linke, D, Hartmann, M.D.
Deposit date:2013-09-02
Release date:2014-01-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.448 Å)
Cite:A Trimeric Lipoprotein Assists in Trimeric Autotransporter Biogenesis in Enterobacteria.
J.Biol.Chem., 289, 2014
6VNW
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BU of 6vnw by Molmil
Cryo-EM structure of apo-BBSome
Descriptor: BBS1 domain-containing protein, Bardet-Biedl syndrome 18 protein, Bardet-Biedl syndrome 2 protein homolog, ...
Authors:Yang, S, Walz, T, Nachury, M, Chou, H.
Deposit date:2020-01-29
Release date:2020-07-01
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:Near-atomic structures of the BBSome reveal the basis for BBSome activation and binding to GPCR cargoes.
Elife, 9, 2020
4C4V
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BU of 4c4v by Molmil
Structure of the outer membrane protein insertase BamA with one POTRA domain.
Descriptor: OUTER MEMBRANE PROTEIN ASSEMBLY FACTOR BAMA
Authors:Zeth, K, Albrecht, R, Diederichs, K.
Deposit date:2013-09-09
Release date:2014-04-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of Bama, an Essential Factor in Outer Membrane Protein Biogenesis
Acta Crystallogr.,Sect.D, 70, 2014
4YTF
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BU of 4ytf by Molmil
Discovery of VX-509 (Decernotinib): A Potent and Selective Janus kinase (JAK) 3 Inhibitor for the Treatment of Autoimmune Diseases
Descriptor: N~2~-[2-(5-chloro-1H-pyrrolo[2,3-b]pyridin-3-yl)-5-fluoropyrimidin-4-yl]-N-(2,2,2-trifluoroethyl)-L-alaninamide, Tyrosine-protein kinase JAK2
Authors:Farmer, L, Ledeboer, M.W, Zuccola, H.J.
Deposit date:2015-03-17
Release date:2015-08-12
Last modified:2015-10-07
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Discovery of VX-509 (Decernotinib): A Potent and Selective Janus Kinase 3 Inhibitor for the Treatment of Autoimmune Diseases.
J.Med.Chem., 58, 2015
7BK4
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BU of 7bk4 by Molmil
Crystal structure of RXRalpha ligand binding domain in complex with a fragment of the TIF2 coactivator
Descriptor: 6-[1-(3,5,5,8,8-PENTAMETHYL-5,6,7,8-TETRAHYDRONAPHTHALEN-2-YL)CYCLOPROPYL]PYRIDINE-3-CARBOXYLIC ACID, Nuclear receptor coactivator 2, Retinoic acid receptor RXR-alpha
Authors:le Maire, A, Bourguet, W.
Deposit date:2021-01-15
Release date:2021-08-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Insights into the Interaction of the Intrinsically Disordered Co-activator TIF2 with Retinoic Acid Receptor Heterodimer (RXR/RAR).
J.Mol.Biol., 433, 2021
6U32
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BU of 6u32 by Molmil
Crystal structure of HaloTag bound to tetramethylrhodamine-HaloTag ligand
Descriptor: 9-[2-carboxy-5-({2-[2-(hexyloxy)ethoxy]ethyl}carbamoyl)phenyl]-6-(dimethylamino)-N,N-dimethyl-3H-xanthen-3-iminium, CHLORIDE ION, HaloTag
Authors:Berro, A.J, Schreiter, E.R.
Deposit date:2019-08-21
Release date:2020-09-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The HaloTag as a general scaffold for far-red tunable chemigenetic indicators.
Nat.Chem.Biol., 17, 2021
6U2M
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BU of 6u2m by Molmil
Crystal structure of a HaloTag-based calcium indicator, HaloCaMP V2, bound to JF635
Descriptor: (1E,3S)-1-{10-[2-carboxy-5-({2-[2-(hexyloxy)ethoxy]ethyl}carbamoyl)phenyl]-7-(3-fluoroazetidin-1-yl)-5,5-dimethyldibenz o[b,e]silin-3(5H)-ylidene}-3-fluoroazetidin-1-ium, CALCIUM ION, CHLORIDE ION, ...
Authors:Deo, C, Schreiter, E.R.
Deposit date:2019-08-20
Release date:2020-09-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:The HaloTag as a general scaffold for far-red tunable chemigenetic indicators.
Nat.Chem.Biol., 17, 2021
8ONU
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BU of 8onu by Molmil
Solution structure of thanatin analogue 7 in complex with LptAm(Ab)1.0
Descriptor: Lipopolysaccharide export system protein LptA, Thanatin-like derivative
Authors:Oi, K.K, Moehle, K, Zerbe, O.
Deposit date:2023-04-04
Release date:2023-06-14
Last modified:2023-11-29
Method:SOLUTION NMR
Cite:Early Molecular Insights into Thanatin Analogues Binding to A. baumannii LptA.
Molecules, 28, 2023
8BJK
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BU of 8bjk by Molmil
X-ray structure of Danio rerio histone deacetylase 6 (HDAC6) CD2 in complex with an inhibitor CPD11352
Descriptor: Histone deacetylase 6, POTASSIUM ION, ZINC ION, ...
Authors:Barinka, C, Motlova, L, Pavlicek, J.
Deposit date:2022-11-04
Release date:2023-09-06
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Comprehensive Mechanistic View of the Hydrolysis of Oxadiazole-Based Inhibitors by Histone Deacetylase 6 (HDAC6).
Acs Chem.Biol., 18, 2023
8P5P
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BU of 8p5p by Molmil
Structure of TECPR1 N-terminal DysF domain
Descriptor: GLYCEROL, Tectonin beta-propeller repeat-containing protein 1
Authors:Boyle, K.B, Elliott, P.R, Randow, F.
Deposit date:2023-05-24
Release date:2023-07-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:TECPR1 conjugates LC3 to damaged endomembranes upon detection of sphingomyelin exposure.
Embo J., 42, 2023
6BQK
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BU of 6bqk by Molmil
CRYSTAL STRUCTURE OF HEPATIS C VIRUS PROTEASE (NS3) COMPLEXED WITH TRIPEPTIDIC ACYL SULFONAMIDE INHIBITOR (COMPOUND 18)
Descriptor: N-(tert-butoxycarbonyl)-3-methyl-L-valyl-(4R)-4-[(7-chloro-4-methoxyisoquinolin-1-yl)oxy]-N-[(1R,2R)-1-[(cyclopropylsulfonyl)carbamoyl]-2-(difluoromethyl)cyclopropyl]-L-prolinamide, NS3 protease, ZINC ION
Authors:Klei, H.E, Sack, J.S.
Deposit date:2017-11-28
Release date:2018-03-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Potent Inhibitors of Hepatitis C Virus NS3 Protease: Employment of a Difluoromethyl Group as a Hydrogen-Bond Donor.
ACS Med Chem Lett, 9, 2018
6TJ0
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BU of 6tj0 by Molmil
Crystal structure of the bacterial cellulose secretion regulator BcsE, residues 217-523, with bound c-di-GMP.
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Bacterial cellulose synthesis subunit E, GLYCEROL
Authors:Zouhir, S, Abidi, W, Krasteva, P.V.
Deposit date:2019-11-23
Release date:2020-07-29
Last modified:2020-08-26
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and Multitasking of the c-di-GMP-Sensing Cellulose Secretion Regulator BcsE.
Mbio, 11, 2020
6BQJ
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BU of 6bqj by Molmil
CRYSTAL STRUCTURE OF HEPATIS C VIRUS PROTEASE (NS3) COMPLEXED WITH TRIPEPTIDIC ACYL SULFONAMIDE INHIBITOR (COMPOUND 16)
Descriptor: ACETATE ION, CHLORIDE ION, N-(tert-butoxycarbonyl)-3-methyl-L-valyl-(4R)-N-{(2S)-1-[(cyclopropylsulfonyl)amino]-4,4-difluoro-1-oxobutan-2-yl}-4-[(7-methoxy-2-phenylquinolin-4-yl)oxy]-L-prolinamide, ...
Authors:Klei, H.E, Sack, J.S.
Deposit date:2017-11-28
Release date:2018-03-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Potent Inhibitors of Hepatitis C Virus NS3 Protease: Employment of a Difluoromethyl Group as a Hydrogen-Bond Donor.
ACS Med Chem Lett, 9, 2018
6YG8
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BU of 6yg8 by Molmil
Cryo-EM structure of a BcsB pentamer in the context of an assembled Bcs macrocomplex
Descriptor: Bacterial cellulose secretion regulator BcsB
Authors:Zouhir, S, Krasteva, P.V.
Deposit date:2020-03-27
Release date:2021-02-24
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Architecture and regulation of an enterobacterial cellulose secretion system.
Sci Adv, 7, 2021
6YBB
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BU of 6ybb by Molmil
Crystal structure of a native BcsE (217-523) - BcsR-BcsQ (R156E mutant) complex with c-di-GMP and ATP bound
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), ADENOSINE-5'-TRIPHOSPHATE, Bacterial cellulose secretion regulator BcsE, ...
Authors:Abidi, W, Zouhir, S, Roche, S, Krasteva, P.V.
Deposit date:2020-03-16
Release date:2021-02-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Architecture and regulation of an enterobacterial cellulose secretion system.
Sci Adv, 7, 2021
6YBU
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BU of 6ybu by Molmil
Crystal structure of a native BcsE (349-523) RQ complex with c-di-GMP and ATP bound
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), ADENOSINE-5'-TRIPHOSPHATE, Bacterial cellulose secretion regulator BcsE, ...
Authors:Abidi, W, Zouhir, S, Roche, S, Krasteva, P.V.
Deposit date:2020-03-17
Release date:2021-02-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Architecture and regulation of an enterobacterial cellulose secretion system.
Sci Adv, 7, 2021
6Z5T
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BU of 6z5t by Molmil
SARS-CoV-2 Macrodomain in complex with ADP-ribose
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Replicase polyprotein 1ab, SODIUM ION
Authors:Zorzini, V, Rack, J, Ahel, I.
Deposit date:2020-05-27
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.571 Å)
Cite:Viral macrodomains: a structural and evolutionary assessment of the pharmacological potential.
Open Biology, 10, 2020
6Z6I
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BU of 6z6i by Molmil
SARS-CoV-2 Macrodomain in complex with ADP-HPD
Descriptor: 1,2-ETHANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, 5'-O-[(S)-{[(S)-{[(2R,3R,4S)-3,4-DIHYDROXYPYRROLIDIN-2-YL]METHOXY}(HYDROXY)PHOSPHORYL]OXY}(HYDROXY)PHOSPHORYL]ADENOSINE, ...
Authors:Zorzini, V, Rack, J, Ahel, I.
Deposit date:2020-05-28
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Viral macrodomains: a structural and evolutionary assessment of the pharmacological potential.
Open Biology, 10, 2020
7QUI
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BU of 7qui by Molmil
Crystal structure of the N-terminal domain of Siglec-8 in complex with sulfonamide sialoside analogue
Descriptor: (2~{S},4~{S},5~{R},6~{R})-5-acetamido-2-[(2~{S},3~{R},4~{S},5~{S},6~{R})-2-[(2~{R},3~{S},4~{R},5~{R},6~{R})-5-acetamido-2-(hydroxymethyl)-4,6-bis(oxidanyl)oxan-3-yl]oxy-3,5-bis(oxidanyl)-6-(sulfooxymethyl)oxan-4-yl]oxy-6-[(1~{R},2~{R})-3-(naphthalen-2-ylsulfonylamino)-1,2-bis(oxidanyl)propyl]-4-oxidanyl-oxane-2-carboxylic acid, Sialic acid-binding Ig-like lectin 8
Authors:Lenza, M.P, Oyenarte, I, Atxabal, U, Nycholat, C, Franconetti, A, Quintana, J.I, Delgado, S, Unione, L, Paulson, J, Jimenez-Barbero, J, Ereno-Orbea, J.
Deposit date:2022-01-18
Release date:2023-01-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.352 Å)
Cite:Structures of the Inhibitory Receptor Siglec-8 in Complex with a High-Affinity Sialoside Analogue and a Therapeutic Antibody.
Jacs Au, 3, 2023
7QU6
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BU of 7qu6 by Molmil
Crystal structure of the N-terminal domain of Siglec-8
Descriptor: Sialic acid-binding Ig-like lectin 8
Authors:Lenza, M.P, Atxabal, U, Nycholat, C.M, Oyenarte, I, Paulson, J.C, Franconetti, A, Quintana, J.I, Unione, L, Delgado, S, Jimenez-Barbero, J, Ereno-Orbea, J.
Deposit date:2022-01-17
Release date:2023-01-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Structures of the Inhibitory Receptor Siglec-8 in Complex with a High-Affinity Sialoside Analogue and a Therapeutic Antibody.
Jacs Au, 3, 2023

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