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6DD0
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BU of 6dd0 by Molmil
Crystal structure of VIM-2 complexed with compound 8
Descriptor: ACETATE ION, Beta-lactamase class B VIM-2, ZINC ION, ...
Authors:Pemberton, O.A, Chen, Y.
Deposit date:2018-05-08
Release date:2019-05-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Heteroaryl Phosphonates as Noncovalent Inhibitors of Both Serine- and Metallocarbapenemases.
J.Med.Chem., 62, 2019
6D1A
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BU of 6d1a by Molmil
Crystal structure of NDM-1 complexed with compound 1
Descriptor: ACETATE ION, Metallo-beta-lactamase type 2, ZINC ION, ...
Authors:Pemberton, O.A, Chen, Y.
Deposit date:2018-04-11
Release date:2019-04-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Heteroaryl Phosphonates as Noncovalent Inhibitors of Both Serine- and Metallocarbapenemases.
J.Med.Chem., 62, 2019
6D19
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BU of 6d19 by Molmil
Crystal structure of KPC-2 complexed with compound 9
Descriptor: Carbapenem-hydrolyzing beta-lactamase KPC, GLYCEROL, [(5-bromo-7-methyl-2-oxo-2H-1-benzopyran-4-yl)methyl]phosphonic acid
Authors:Pemberton, O.A, Chen, Y.
Deposit date:2018-04-11
Release date:2019-04-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Heteroaryl Phosphonates as Noncovalent Inhibitors of Both Serine- and Metallocarbapenemases.
J.Med.Chem., 62, 2019
6XD7
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BU of 6xd7 by Molmil
KPC-2 N170A mutant bound to hydrolyzed ampicillin at 1.65 A
Descriptor: (2R,4S)-2-[(R)-{[(2R)-2-amino-2-phenylacetyl]amino}(carboxy)methyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, Carbapenem-hydrolyzing beta-lactamase KPC, GLYCEROL
Authors:Pemberton, O.A, Chen, Y.
Deposit date:2020-06-10
Release date:2020-12-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:KPC-2 beta-lactamase enables carbapenem antibiotic resistance through fast deacylation of the covalent intermediate.
J.Biol.Chem., 296, 2020
6XJ8
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BU of 6xj8 by Molmil
KPC-2 N170A mutant bound to hydrolyzed imipenem at 2.05 A
Descriptor: (2R)-2-[(2S,3R)-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-4-(2-methanimidamidoethylsulfanyl)-2,3-dihydro-1H-pyrrole -5-carboxylic acid, Carbapenem-hydrolyzing beta-lactamase KPC
Authors:Pemberton, O.A, Chen, Y.
Deposit date:2020-06-23
Release date:2020-12-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:KPC-2 beta-lactamase enables carbapenem antibiotic resistance through fast deacylation of the covalent intermediate.
J.Biol.Chem., 296, 2020
6XD5
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BU of 6xd5 by Molmil
Apo KPC-2 N170A mutant at 1.20 A
Descriptor: Carbapenem-hydrolyzing beta-lactamase KPC, GLYCEROL, SULFATE ION
Authors:Pemberton, O.A, Chen, Y.
Deposit date:2020-06-10
Release date:2020-12-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:KPC-2 beta-lactamase enables carbapenem antibiotic resistance through fast deacylation of the covalent intermediate.
J.Biol.Chem., 296, 2020
6V1M
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BU of 6v1m by Molmil
Structure of NDM-1 bound to QPX7728 at 1.05 A
Descriptor: (1~{a}~{R},7~{b}~{S})-5-fluoranyl-2,2-bis(oxidanyl)-1~{a},7~{b}-dihydro-1~{H}-cyclopropa[c][1,2]benzoxaborinine-4-carboxylic acid, Metallo-beta-lactamase type 2, ZINC ION
Authors:Pemberton, O.A, Chen, Y.
Deposit date:2019-11-20
Release date:2020-03-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Discovery of Cyclic Boronic Acid QPX7728, an Ultrabroad-Spectrum Inhibitor of Serine and Metallo-beta-lactamases.
J.Med.Chem., 63, 2020
6V1J
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BU of 6v1j by Molmil
Structure of KPC-2 bound to QPX7728 at 1.30 A
Descriptor: (1aR,7bS)-5-fluoro-2-hydroxy-1,1a,2,7b-tetrahydrocyclopropa[c][1,2]benzoxaborinine-4-carboxylic acid, (1~{a}~{R},7~{b}~{S})-5-fluoranyl-2,2-bis(oxidanyl)-1~{a},7~{b}-dihydro-1~{H}-cyclopropa[c][1,2]benzoxaborinine-4-carboxylic acid, Carbapenem-hydrolyzing beta-lactamase KPC, ...
Authors:Pemberton, O.A, Chen, Y.
Deposit date:2019-11-20
Release date:2020-03-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Discovery of Cyclic Boronic Acid QPX7728, an Ultrabroad-Spectrum Inhibitor of Serine and Metallo-beta-lactamases.
J.Med.Chem., 63, 2020
6V1P
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BU of 6v1p by Molmil
Structure of VIM-2 bound to QPX7728 at 1.20 A
Descriptor: (1~{a}~{R},7~{b}~{S})-5-fluoranyl-2,2-bis(oxidanyl)-1~{a},7~{b}-dihydro-1~{H}-cyclopropa[c][1,2]benzoxaborinine-4-carboxylic acid, ACETATE ION, Beta-lactamase class B VIM-2, ...
Authors:Pemberton, O.A, Chen, Y.
Deposit date:2019-11-20
Release date:2020-03-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Discovery of Cyclic Boronic Acid QPX7728, an Ultrabroad-Spectrum Inhibitor of Serine and Metallo-beta-lactamases.
J.Med.Chem., 63, 2020
6V1O
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BU of 6v1o by Molmil
Structure of OXA-48 bound to QPX7728 at 1.80 A
Descriptor: (1aR,7bS)-5-fluoro-2-hydroxy-1,1a,2,7b-tetrahydrocyclopropa[c][1,2]benzoxaborinine-4-carboxylic acid, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Pemberton, O.A, Chen, Y.
Deposit date:2019-11-20
Release date:2020-03-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Discovery of Cyclic Boronic Acid QPX7728, an Ultrabroad-Spectrum Inhibitor of Serine and Metallo-beta-lactamases.
J.Med.Chem., 63, 2020
6O3R
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BU of 6o3r by Molmil
Crystal Structure of NDM-1 D199N with Compound 7
Descriptor: Carbapenem Hydrolyzing Class B Metallo beta lactamase NDM-1, ZINC ION, [(5-methoxy-7-methyl-2-oxo-2H-1-benzopyran-4-yl)methyl]phosphonic acid
Authors:Akhtar, A, Chen, Y.
Deposit date:2019-02-27
Release date:2019-09-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Heteroaryl Phosphonates as Noncovalent Inhibitors of Both Serine- and Metallocarbapenemases.
J.Med.Chem., 62, 2019
6NY7
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BU of 6ny7 by Molmil
Crystal Structure of NDM-1 D199N with Compound 16
Descriptor: Carbapenem Hydrolyzing Class B Metallo beta lactamase NDM-1, ZINC ION, [(5,7-dibromo-2-oxo-1,2-dihydroquinolin-4-yl)methyl]phosphonic acid
Authors:Akhtar, A, Chen, Y.
Deposit date:2019-02-11
Release date:2019-09-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Heteroaryl Phosphonates as Noncovalent Inhibitors of Both Serine- and Metallocarbapenemases.
J.Med.Chem., 62, 2019
6O5T
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BU of 6o5t by Molmil
Crystal Structure of VIM-2 with Compound 16
Descriptor: ACETATE ION, Beta-lactamase class B VIM-2, ZINC ION, ...
Authors:Akhtar, A, Chen, Y.
Deposit date:2019-03-04
Release date:2019-09-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Heteroaryl Phosphonates as Noncovalent Inhibitors of Both Serine- and Metallocarbapenemases.
J.Med.Chem., 62, 2019
6PQI
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BU of 6pqi by Molmil
Crystal Structure of Class D Beta-lactamase OXA-48 with Cefotaxime
Descriptor: ACETATE ION, CEFOTAXIME, C3' cleaved, ...
Authors:Akhtar, A, Chen, Y.
Deposit date:2019-07-09
Release date:2020-01-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural Basis for Substrate Specificity and Carbapenemase Activity of OXA-48 Class D beta-Lactamase.
Acs Infect Dis., 6, 2020
6PSG
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BU of 6psg by Molmil
Crystal Structure of Class D Beta-lactamase OXA-48 with Faropenem
Descriptor: (2R,5R)-2-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-5-[(2R)-tetrahydrofuran-2-yl]-2,5-dihydro-1,3-thiazole-4-carboxylic acid, CHLORIDE ION, Class D Carbapenemase OXA-48, ...
Authors:Akhtar, A, Chen, Y.
Deposit date:2019-07-12
Release date:2020-01-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Structural Basis for Substrate Specificity and Carbapenemase Activity of OXA-48 Class D beta-Lactamase.
Acs Infect Dis., 6, 2020
6PTU
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BU of 6ptu by Molmil
Crystal Structure of Class D Beta-lactamase OXA-48 with Imipenem
Descriptor: CHLORIDE ION, Class D Carbapenemase OXA-48, Imipenem
Authors:Akhtar, A, Chen, Y.
Deposit date:2019-07-16
Release date:2020-01-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.004 Å)
Cite:Structural Basis for Substrate Specificity and Carbapenemase Activity of OXA-48 Class D beta-Lactamase.
Acs Infect Dis., 6, 2020
6PT5
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BU of 6pt5 by Molmil
Crystal Structure of Class D Beta-lactamase OXA-48 with Cefoxitin
Descriptor: (2R)-2-{(1S)-1-methoxy-2-oxo-1-[(thiophen-2-ylacetyl)amino]ethyl}-5-methylidene-5,6-dihydro-2H-1,3-thiazine-4-carboxylic acid, CHLORIDE ION, Class D Carbapenemase OXA-48
Authors:Akhtar, A, Chen, Y.
Deposit date:2019-07-14
Release date:2020-01-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.304 Å)
Cite:Structural Basis for Substrate Specificity and Carbapenemase Activity of OXA-48 Class D beta-Lactamase.
Acs Infect Dis., 6, 2020
6PT1
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BU of 6pt1 by Molmil
Crystal Structure of Class D Beta-lactamase OXA-48 with Meropenem
Descriptor: (4R,5S)-3-{[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-5-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-4-methyl-4,5-d ihydro-1H-pyrrole-2-carboxylic acid, CHLORIDE ION, Class D Carbapenemase OXA-48, ...
Authors:Akhtar, A, Chen, Y.
Deposit date:2019-07-14
Release date:2020-01-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for Substrate Specificity and Carbapenemase Activity of OXA-48 Class D beta-Lactamase.
Acs Infect Dis., 6, 2020
6PK0
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BU of 6pk0 by Molmil
Crystal Structure of OXA-48 with Hydrolyzed Imipenem
Descriptor: (2R,4S)-2-[(1S,2R)-1-carboxy-2-hydroxypropyl]-4-[(2-{[(Z)-iminomethyl]amino}ethyl)sulfanyl]-3,4-dihydro-2H-pyrrole-5-ca rboxylic acid, CHLORIDE ION, GLYCEROL, ...
Authors:Akhtar, A, Chen, Y.
Deposit date:2019-06-28
Release date:2020-01-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Basis for Substrate Specificity and Carbapenemase Activity of OXA-48 Class D beta-Lactamase.
Acs Infect Dis., 6, 2020
6MD8
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BU of 6md8 by Molmil
Crystal structure of CTX-M-14 with compound 3
Descriptor: 1-(2,4-dichlorophenyl)-4-(1H-tetrazol-5-yl)-1H-pyrazol-5-amine, Beta-lactamase CTX-M-14, DIMETHYL SULFOXIDE
Authors:Akhtar, A, Chen, Y.
Deposit date:2018-09-04
Release date:2019-04-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Active-Site Druggability of Carbapenemases and Broad-Spectrum Inhibitor Discovery.
Acs Infect Dis., 5, 2019
6MEY
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BU of 6mey by Molmil
Crystal structure of KPC-2 with compound 9
Descriptor: (2R)-2-phenyl-2-(phenylamino)-N-(1H-tetrazol-5-yl)acetamide, ACETATE ION, Carbapenem-hydrolyzing beta-lactamase KPC
Authors:Akhtar, A, Chen, Y.
Deposit date:2018-09-07
Release date:2019-04-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Active-Site Druggability of Carbapenemases and Broad-Spectrum Inhibitor Discovery.
Acs Infect Dis., 5, 2019
6MDU
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BU of 6mdu by Molmil
Crystal structure of NDM-1 with compound 7
Descriptor: 1,5-diphenyl-N-(1H-tetrazol-5-yl)-1H-pyrazole-3-carboxamide, GLYCEROL, Metallo-beta-lactamase type 2, ...
Authors:Akhtar, A, Chen, Y.
Deposit date:2018-09-05
Release date:2019-04-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Active-Site Druggability of Carbapenemases and Broad-Spectrum Inhibitor Discovery.
Acs Infect Dis., 5, 2019
6MIA
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BU of 6mia by Molmil
Crystal structure of CTX-M-14 with compound 6
Descriptor: 3-(1H-tetrazol-5-ylmethyl)-5,6,7,8-tetrahydro[1]benzothieno[2,3-d]pyrimidin-4(3H)-one, Beta-lactamase
Authors:Akhtar, A, Chen, Y.
Deposit date:2018-09-19
Release date:2019-04-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.399 Å)
Cite:Active-Site Druggability of Carbapenemases and Broad-Spectrum Inhibitor Discovery.
Acs Infect Dis., 5, 2019
6M7I
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BU of 6m7i by Molmil
Crystal structure of KPC-2 with compound 3
Descriptor: 1-(2,4-dichlorophenyl)-4-(1H-tetrazol-5-yl)-1H-pyrazol-5-amine, Carbapenem-hydrolyzing beta-lactamase KPC, GLYCEROL
Authors:Akhtar, A, Chen, Y.
Deposit date:2018-08-20
Release date:2019-04-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:Active-Site Druggability of Carbapenemases and Broad-Spectrum Inhibitor Discovery.
Acs Infect Dis., 5, 2019
6MNP
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BU of 6mnp by Molmil
Crystal structure of KPC-2 with compound 6
Descriptor: 3-(1H-tetrazol-5-ylmethyl)-5,6,7,8-tetrahydro[1]benzothieno[2,3-d]pyrimidin-4(3H)-one, Carbapenem-hydrolyzing beta-lactamase KPC, GLYCEROL
Authors:Akhtar, A, Chen, Y.
Deposit date:2018-10-02
Release date:2019-04-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.202 Å)
Cite:Active-Site Druggability of Carbapenemases and Broad-Spectrum Inhibitor Discovery.
Acs Infect Dis., 5, 2019

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