Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4I0T
DownloadVisualize
BU of 4i0t by Molmil
Crystal structure of spleen tyrosine kinase complexed with 2-(5,6,7,8-Tetrahydro-imidazo[1,5-a]pyridin-1-yl)-5H-pyrrolo[2,3-b]pyrazine-7-carboxylic acid tert-butylamide
Descriptor: N-tert-butyl-2-(5,6,7,8-tetrahydroimidazo[1,5-a]pyridin-1-yl)-5H-pyrrolo[2,3-b]pyrazine-7-carboxamide, Tyrosine-protein kinase SYK
Authors:Kuglstatter, A, Slade, M.
Deposit date:2012-11-19
Release date:2013-10-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Pyrrolopyrazines as selective spleen tyrosine kinase inhibitors.
J.Med.Chem., 56, 2013
2L84
DownloadVisualize
BU of 2l84 by Molmil
Solution NMR structures of CBP bromodomain with small molecule j28
Descriptor: 5-[(E)-(2-amino-4-hydroxy-5-methylphenyl)diazenyl]-2,4-dimethylbenzenesulfonic acid, CREB-binding protein
Authors:Borah, J.C, Mujtaba, S, Karakikes, I, Zeng, L, Muller, M, Patel, J, Moshkina, N, Morohashi, K, Zhang, W, Gerona-Navarro, G, Hajjar, R.J, Zhou, M.
Deposit date:2011-01-03
Release date:2011-01-19
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A Small Molecule Binding to the Coactivator CREB-Binding Protein Blocks Apoptosis in Cardiomyocytes.
Chem.Biol., 18, 2011
4YZ6
DownloadVisualize
BU of 4yz6 by Molmil
Crystal Structure of Myc3[44-238] from Arabidopsis in complex with Jaz1 peptide [200-221]
Descriptor: Protein TIFY 10A, Transcription factor MYC3
Authors:Ke, J, Zhang, F, Brunzelle, J, Xu, H.E, Melcher, K, HE, S.Y.
Deposit date:2015-03-24
Release date:2015-08-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis of JAZ repression of MYC transcription factors in jasmonate signalling.
Nature, 525, 2015
4IS4
DownloadVisualize
BU of 4is4 by Molmil
The glutamine synthetase from the dicotyledonous plant M. truncatula is a decamer
Descriptor: Glutamine synthetase
Authors:Seabra, A.R, Carvalho, H, Pereira, P.J.B.
Deposit date:2013-01-16
Release date:2014-04-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The structures of cytosolic and plastid-located glutamine synthetases from Medicago truncatula reveal a common and dynamic architecture.
Acta Crystallogr.,Sect.D, 70, 2014
2L85
DownloadVisualize
BU of 2l85 by Molmil
Solution NMR structures of CBP bromodomain with small molecule of HBS
Descriptor: 4-[(E)-(4-hydroxyphenyl)diazenyl]benzenesulfonic acid, CREB-binding protein
Authors:Borah, J.C, Mujtaba, S, Karakikes, I, Zeng, L, Muller, M, Patel, J, Moshkina, N, Morohashi, K, Zhang, W, Gerona-Navarro, G, Hajjar, R.J, Zhou, M.
Deposit date:2011-01-04
Release date:2011-01-19
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A Small Molecule Binding to the Coactivator CREB-Binding Protein Blocks Apoptosis in Cardiomyocytes.
Chem.Biol., 18, 2011
2LLJ
DownloadVisualize
BU of 2llj by Molmil
Structure of a bis-naphthalene bound to a thymine-thymine DNA mismatch
Descriptor: 6,22-dioxa-3,9,19,25-tetraazoniapentacyclo[25.5.3.3~11,17~.0~14,37~.0~30,34~]octatriaconta-1(33),11(38),12,14(37),15,17(36),27,29,31,34-decaene, DNA (5'-D(*CP*GP*TP*CP*GP*TP*AP*GP*TP*GP*C)-3'), DNA (5'-D(*GP*CP*AP*CP*TP*TP*CP*GP*AP*CP*G)-3')
Authors:Jourdan, M, Granzhan, A, Guillot, R, Dumy, P, Teulade-Fichou, M.
Deposit date:2011-11-10
Release date:2013-02-20
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Double threading through DNA: NMR structural study of a bis-naphthalene macrocycle bound to a thymine-thymine mismatch.
Nucleic Acids Res., 40, 2012
2LL9
DownloadVisualize
BU of 2ll9 by Molmil
Solution structure of a DNA containing a thymime-thymine mismatch
Descriptor: DNA (5'-D(*CP*GP*TP*CP*GP*TP*AP*GP*TP*GP*C)-3'), DNA (5'-D(*GP*CP*AP*CP*TP*TP*CP*GP*AP*CP*G)-3')
Authors:Jourdan, M, Granzhan, A, Guillot, R, Dumy, P, Teulade-Fichou, M.
Deposit date:2011-11-03
Release date:2012-09-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Double threading through DNA: NMR structural study of a bis-naphthalene macrocycle bound to a thymine-thymine mismatch.
Nucleic Acids Res., 40, 2012
5XTA
DownloadVisualize
BU of 5xta by Molmil
Crystal structure of lpg1832, a VirK family protein from Legionella pneumophila
Descriptor: GLYCEROL, SULFATE ION, VirK protein
Authors:Yin, S, Gong, X, Zhang, N, Ge, H.
Deposit date:2017-06-18
Release date:2017-08-16
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of lpg1832, a VirK family protein from Legionella pneumophila, reveals a novel fold for bacterial VirK proteins
FEBS Lett., 591, 2017
2MFQ
DownloadVisualize
BU of 2mfq by Molmil
NMR solution structures of FRS2a PTB domain with neurotrophin receptor TrkB
Descriptor: BDNF/NT-3 growth factors receptor, Fibroblast growth factor receptor substrate 2
Authors:Zeng, L, Zhou, M.
Deposit date:2013-10-18
Release date:2014-03-05
Last modified:2014-06-25
Method:SOLUTION NMR
Cite:Structural insights into FRS2 alpha PTB domain recognition by neurotrophin receptor TrkB.
Proteins, 82, 2014
8I71
DownloadVisualize
BU of 8i71 by Molmil
Hepatitis B virus core protein Y132A mutant in complex with Linvencorvir (RG7907), a Hepatitis B Virus (HBV) Core Protein Allosteric Modulator (CpAM)
Descriptor: 3-[(8~{a}~{S})-7-[[5-ethoxycarbonyl-4-(3-fluoranyl-2-methyl-phenyl)-2-(1,3-thiazol-2-yl)-1,4-dihydropyrimidin-6-yl]methyl]-3-oxidanylidene-5,6,8,8~{a}-tetrahydro-1~{H}-imidazo[1,5-a]pyrazin-2-yl]-2,2-dimethyl-propanoic acid, CHLORIDE ION, Capsid protein, ...
Authors:Zhou, Z, Xu, Z.H.
Deposit date:2023-01-30
Release date:2023-03-22
Last modified:2023-04-05
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Discovery of Linvencorvir (RG7907), a Hepatitis B Virus Core Protein Allosteric Modulator, for the Treatment of Chronic HBV Infection.
J.Med.Chem., 66, 2023
5X0S
DownloadVisualize
BU of 5x0s by Molmil
Solution NMR structure of peptide toxin SsTx from Scolopendra subspinipes mutilans
Descriptor: SsTx
Authors:Wu, F, Luo, L, Qu, D, Zhang, L, Tian, C, Lai, R.
Deposit date:2017-01-23
Release date:2018-01-24
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Centipedes subdue giant prey by blocking KCNQ channels
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5X5Y
DownloadVisualize
BU of 5x5y by Molmil
A membrane protein complex
Descriptor: Probable ATP-binding component of ABC transporter, Uncharacterized protein
Authors:Luo, Q, Yang, X, Huang, Y.
Deposit date:2017-02-18
Release date:2017-04-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.465 Å)
Cite:Structural basis for lipopolysaccharide extraction by ABC transporter LptB2FG
Nat. Struct. Mol. Biol., 24, 2017
7FEO
DownloadVisualize
BU of 7feo by Molmil
Crystal structure of AtMBD5 MBD domain
Descriptor: Methyl-CpG-binding domain-containing protein 5, SULFATE ION
Authors:Zhou, M.Q, Wu, Z.B, Liu, K, Min, J.R, Structural Genomics Consortium (SGC)
Deposit date:2021-07-21
Release date:2021-12-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Family-wide Characterization of Methylated DNA Binding Ability of Arabidopsis MBDs.
J.Mol.Biol., 434, 2022
2KUB
DownloadVisualize
BU of 2kub by Molmil
Solution structure of the alpha subdomain of the major non-repeat unit of Fap1 fimbriae of Streptococcus parasanguis
Descriptor: Fimbriae-associated protein Fap1
Authors:Ramboarina, S, Garnett, J.A, Bodey, A, Simpson, P, Bardiaux, B, Nilges, M, Matthews, S.
Deposit date:2010-02-17
Release date:2010-07-21
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural insights into serine-rich fimbriae from gram-positive bacteria.
J.Biol.Chem., 2010
5N3U
DownloadVisualize
BU of 5n3u by Molmil
The structure of the complex of CpcE and CpcF of phycocyanin lyase from Nostoc sp. PCC7120
Descriptor: Phycocyanobilin lyase subunit alpha, Phycocyanobilin lyase subunit beta
Authors:Hoeppner, A, Zhao, C, Xu, Q.-Z, Gaertner, W, Scheer, H, Zhao, K.-H.
Deposit date:2017-02-09
Release date:2017-12-06
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structures and enzymatic mechanisms of phycobiliprotein lyases CpcE/F and PecE/F.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4QIK
DownloadVisualize
BU of 4qik by Molmil
Crystal structure of the ROQ domain of human Roquin in complex with the TNF23 RNA duplex
Descriptor: 5'-R(*AP*C*AP*UP*GP*UP*UP*UP*UP*CP*UP*GP*UP*GP*AP*AP*AP*AP*CP*GP*GP*AP*G)-3', CHLORIDE ION, GLYCEROL, ...
Authors:Tan, D, Tong, L.
Deposit date:2014-05-31
Release date:2014-07-16
Last modified:2014-08-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The ROQ domain of Roquin recognizes mRNA constitutive-decay element and double-stranded RNA.
Nat.Struct.Mol.Biol., 21, 2014
5N6O
DownloadVisualize
BU of 5n6o by Molmil
Wild type human Rac1-GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Ras-related C3 botulinum toxin substrate 1
Authors:Cherfils, J, Ferrandez, Y.
Deposit date:2017-02-15
Release date:2017-12-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Allosteric inhibition of the guanine nucleotide exchange factor DOCK5 by a small molecule.
Sci Rep, 7, 2017
6TEM
DownloadVisualize
BU of 6tem by Molmil
CENP-A nucleosome core particle with 145 base pairs of the Widom 601 sequence by cryo-EM
Descriptor: Histone H2A, Histone H2B 1.1, Histone H3-like centromeric protein A, ...
Authors:Boopathi, R, Danev, R, Petosa, C, Bednar, J.
Deposit date:2019-11-12
Release date:2020-04-08
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Phase-plate cryo-EM structure of the Widom 601 CENP-A nucleosome core particle reveals differential flexibility of the DNA ends.
Nucleic Acids Res., 48, 2020
4RXJ
DownloadVisualize
BU of 4rxj by Molmil
crystal structure of WHSC1L1-PWWP2
Descriptor: Histone-lysine N-methyltransferase NSD3, UNKNOWN ATOM OR ION
Authors:Qin, S, Tempel, W, Dong, A, Li, Y, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2014-12-11
Release date:2015-01-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Histone and DNA binding ability studies of the NSD subfamily of PWWP domains.
Biochem.Biophys.Res.Commun., 569, 2021
4QIL
DownloadVisualize
BU of 4qil by Molmil
Crystal structure of the ROQ domain of human Roquin in complex with the Hmg19 stem-loop RNA
Descriptor: 5'-R(*CP*UP*CP*CP*CP*UP*UP*CP*UP*GP*UP*GP*AP*AP*GP*GP*GP*GP*A)-3', CALCIUM ION, Roquin-1
Authors:Tan, D, Tong, L.
Deposit date:2014-05-31
Release date:2014-07-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The ROQ domain of Roquin recognizes mRNA constitutive-decay element and double-stranded RNA.
Nat.Struct.Mol.Biol., 21, 2014
2LMZ
DownloadVisualize
BU of 2lmz by Molmil
Solution NMR structure of the novel conotoxin im23a from Conus imperialis
Descriptor: Conotoxin im17a
Authors:Khoo, K.K, Galea, C.A, Boonyalai, N, Norton, R.S.
Deposit date:2011-12-15
Release date:2012-03-14
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:A helical conotoxin from Conus imperialis has a novel cysteine framework and defines a new superfamily.
J.Biol.Chem., 287, 2012
7WIN
DownloadVisualize
BU of 7win by Molmil
Crystal structure of BAZ2B TAM domain
Descriptor: Bromodomain adjacent to zinc finger domain protein 2B
Authors:Feng, Y.Y, Liu, K, Min, J.R.
Deposit date:2022-01-04
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of the BAZ2B TAM domain.
Heliyon, 8, 2022
3HYK
DownloadVisualize
BU of 3hyk by Molmil
2.31 Angstrom resolution crystal structure of a holo-(acyl-carrier-protein) synthase from Bacillus anthracis str. Ames in complex with CoA (3',5'-ADP)
Descriptor: ADENOSINE-3'-5'-DIPHOSPHATE, CHLORIDE ION, Holo-[acyl-carrier-protein] synthase, ...
Authors:Halavaty, A.S, Minasov, G, Skarina, T, Onopriyenko, O, Papazisi, L, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2009-06-22
Release date:2009-06-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural characterization and comparison of three acyl-carrier-protein synthases from pathogenic bacteria.
Acta Crystallogr.,Sect.D, 68, 2012
7VON
DownloadVisualize
BU of 7von by Molmil
Native alpha-2-macroglobulin monomer
Descriptor: Alpha-2-macroglobulin
Authors:Huang, X, Wang, Y.
Deposit date:2021-10-14
Release date:2022-11-16
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (5.2 Å)
Cite:Cryo-EM structures reveal the dynamic transformation of human alpha-2-macroglobulin working as a protease inhibitor.
Sci China Life Sci, 65, 2022
7VOO
DownloadVisualize
BU of 7voo by Molmil
Induced alpha-2-macroglobulin monomer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-2-macroglobulin, ...
Authors:Huang, X, Wang, Y, Ping, Z.
Deposit date:2021-10-14
Release date:2022-10-19
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM structures reveal the dynamic transformation of human alpha-2-macroglobulin working as a protease inhibitor.
Sci China Life Sci, 65, 2022

223166

건을2024-07-31부터공개중

PDB statisticsPDBj update infoContact PDBjnumon