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5GW4
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BU of 5gw4 by Molmil
Structure of Yeast NPP-TRiC
分子名称: T-complex protein 1 subunit alpha, T-complex protein 1 subunit beta, T-complex protein 1 subunit delta, ...
著者Zang, Y, Jin, M, Wang, H, Cong, Y.
登録日2016-09-08
公開日2016-10-26
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Staggered ATP binding mechanism of eukaryotic chaperonin TRiC (CCT) revealed through high-resolution cryo-EM.
Nat. Struct. Mol. Biol., 23, 2016
5GW5
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BU of 5gw5 by Molmil
Structure of TRiC-AMP-PNP
分子名称: T-complex protein 1 subunit alpha, T-complex protein 1 subunit beta, T-complex protein 1 subunit delta, ...
著者Zang, Y, Jin, M, Wang, H, Cong, Y.
登録日2016-09-08
公開日2016-10-26
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Staggered ATP binding mechanism of eukaryotic chaperonin TRiC (CCT) revealed through high-resolution cryo-EM.
Nat. Struct. Mol. Biol., 23, 2016
1Z34
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BU of 1z34 by Molmil
Crystal structure of Trichomonas vaginalis purine nucleoside phosphorylase complexed with 2-fluoro-2'-deoxyadenosine
分子名称: 5-(6-AMINO-2-FLUORO-PURIN-9-YL)-2-HYDROXYMETHYL-TETRAHYDRO-FURAN-3-OL, purine nucleoside phosphorylase
著者Zhang, Y, Wang, W.H, Wu, S.W, Wang, C.C, Ealick, S.E.
登録日2005-03-10
公開日2005-03-29
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Identification of a subversive substrate of Trichomonas vaginalis purine nucleoside phosphorylase and the crystal structure of the enzyme-substrate complex.
J.Biol.Chem., 280, 2005
1Z36
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BU of 1z36 by Molmil
Crystal structure of Trichomonas vaginalis purine nucleoside phosphorylase complexed with formycin A
分子名称: (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol, purine nucleoside phosphorylase
著者Zhang, Y, Wang, W.H, Wu, S.W, Wang, C.C, Ealick, S.E.
登録日2005-03-10
公開日2005-03-29
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Identification of a subversive substrate of Trichomonas vaginalis purine nucleoside phosphorylase and the crystal structure of the enzyme-substrate complex.
J.Biol.Chem., 280, 2005
1Z33
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BU of 1z33 by Molmil
Crystal structure of Trichomonas vaginalis purine nucleoside phosphorylase
分子名称: purine nucleoside phosphorylase
著者Zhang, Y, Wang, W.H, Wu, S.W, Wang, C.C, Ealick, S.E.
登録日2005-03-10
公開日2005-03-29
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Identification of a subversive substrate of Trichomonas vaginalis purine nucleoside phosphorylase and the crystal structure of the enzyme-substrate complex.
J.Biol.Chem., 280, 2005
1Z39
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BU of 1z39 by Molmil
Crystal structure of Trichomonas vaginalis purine nucleoside phosphorylase complexed with 2'-deoxyinosine
分子名称: 2'-DEOXYINOSINE, purine nucleoside phosphorylase
著者Zhang, Y, Wang, W.H, Wu, S.W, Wang, C.C, Ealick, S.E.
登録日2005-03-10
公開日2005-03-29
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Identification of a subversive substrate of Trichomonas vaginalis purine nucleoside phosphorylase and the crystal structure of the enzyme-substrate complex.
J.Biol.Chem., 280, 2005
1Z38
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BU of 1z38 by Molmil
Crystal structure of Trichomonas vaginalis purine nucleoside phosphorylase complexed with inosine
分子名称: INOSINE, purine nucleoside phosphorylase
著者Zhang, Y, Wang, W.H, Wu, S.W, Wang, C.C, Ealick, S.E.
登録日2005-03-10
公開日2005-03-29
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Identification of a subversive substrate of Trichomonas vaginalis purine nucleoside phosphorylase and the crystal structure of the enzyme-substrate complex.
J.Biol.Chem., 280, 2005
1Z37
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BU of 1z37 by Molmil
Crystal structure of Trichomonas vaginalis purine nucleoside phosphorylase complexed with adenosine
分子名称: ADENOSINE, purine nucleoside phosphorylase
著者Zhang, Y, Wang, W.H, Wu, S.W, Wang, C.C, Ealick, S.E.
登録日2005-03-10
公開日2005-03-29
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Identification of a subversive substrate of Trichomonas vaginalis purine nucleoside phosphorylase and the crystal structure of the enzyme-substrate complex.
J.Biol.Chem., 280, 2005
1Z35
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BU of 1z35 by Molmil
Crystal structure of Trichomonas vaginalis purine nucleoside phosphorylase complexed with 2-fluoroadenosine
分子名称: 2-(6-AMINO-2-FLUORO-PURIN-9-YL)-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3,4-DIOL, purine nucleoside phosphorylase
著者Zhang, Y, Wang, W.H, Wu, S.W, Wang, C.C, Ealick, S.E.
登録日2005-03-10
公開日2005-03-29
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Identification of a subversive substrate of Trichomonas vaginalis purine nucleoside phosphorylase and the crystal structure of the enzyme-substrate complex.
J.Biol.Chem., 280, 2005
9UDE
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BU of 9ude by Molmil
Crystal structure of MonCI in complex with diepoxidized farnesyl acetate
分子名称: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
著者Xiao, H.L, Guan, Y.Z, Chen, X.
登録日2025-04-06
公開日2025-04-16
最終更新日2025-05-21
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Mechanistic and molecular insights into iterative triepoxidation catalyzed by monooxygenase MonCI using a natural substrate analog.
Int.J.Biol.Macromol., 311, 2025
9UDB
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BU of 9udb by Molmil
Crystal structure of MonCI in complex with farnesyl acetate
分子名称: (2E,6E)-3,7,11-trimethyldodeca-2,6,10-trien-1-yl acetate, CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Deng, Y.M, Chen, X.
登録日2025-04-06
公開日2025-04-16
最終更新日2025-05-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Mechanistic and molecular insights into iterative triepoxidation catalyzed by monooxygenase MonCI using a natural substrate analog.
Int.J.Biol.Macromol., 311, 2025
9UDD
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BU of 9udd by Molmil
Crystal structure of MonCI in complex with monoepoxidized farnesyl acetate
分子名称: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
著者Xiao, H.L, Guan, Y.Z, Chen, X.
登録日2025-04-06
公開日2025-04-16
最終更新日2025-05-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Mechanistic and molecular insights into iterative triepoxidation catalyzed by monooxygenase MonCI using a natural substrate analog.
Int.J.Biol.Macromol., 311, 2025
6GFE
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BU of 6gfe by Molmil
High-resolution Structure of a therapeutic full-length anti-NPRA Antibody with exceptional Conformational Diversity
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, CALCIUM ION, ...
著者Hoerer, S.
登録日2018-04-30
公開日2019-05-15
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of a Therapeutic Full-Length Anti-NPRA IgG4 Antibody: Dissecting Conformational Diversity.
Biophys.J., 116, 2019
8GTW
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BU of 8gtw by Molmil
SARS-CoV-2 3CL protease (3CLpro) in complex with compound JZD-26
分子名称: (2S)-4-(3,4-dichlorophenyl)-1-[(2-oxidanylidene-1H-quinolin-4-yl)carbonyl]-N-[3,3,3-tris(fluoranyl)propyl]piperazine-2-carboxamide, 3C-like proteinase
著者Su, H.X, Nie, T.Q, Xie, H, Li, M.J, Xu, Y.C.
登録日2022-09-08
公開日2023-09-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Development of novel inhibitors against SARS-CoV-2 3CLpro
To Be Published
8GTV
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BU of 8gtv by Molmil
SARS-CoV-2 3CL protease (3CLpro) in complex with compound JZD-07
分子名称: 3C-like proteinase, 4-[(2~{S})-4-(3,4-dichlorophenyl)-2-(morpholin-4-ylmethyl)piperazin-1-yl]carbonyl-1~{H}-quinolin-2-one
著者Su, H.X, Nie, T.Q, Xie, H, Li, M.J, Xu, Y.C.
登録日2022-09-08
公開日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Development of novel inhibitors against SARS-CoV-2 3CLpro
To Be Published
9IWV
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BU of 9iwv by Molmil
Crystal structure of Lsd18 after incubation with the substrate
分子名称: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
著者Wang, Q, Kim, C.Y, Chen, X.
登録日2024-07-26
公開日2025-04-16
最終更新日2025-05-21
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Mechanistic and molecular insights into iterative triepoxidation catalyzed by monooxygenase MonCI using a natural substrate analog.
Int.J.Biol.Macromol., 311, 2025
6KS6
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BU of 6ks6 by Molmil
TRiC at 0.2 mM ADP-AlFx, Conformation 1, 0.2-C1
分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, MAGNESIUM ION, ...
著者Jin, M, Cong, Y.
登録日2019-08-23
公開日2019-09-18
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (2.99 Å)
主引用文献An ensemble of cryo-EM structures of TRiC reveal its conformational landscape and subunit specificity.
Proc.Natl.Acad.Sci.USA, 116, 2019
8HM1
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BU of 8hm1 by Molmil
crystal structure of human ubiquitin-like protein from Bacteroides fragilis
分子名称: 1,2-ETHANEDIOL, Putative ubiquitin
著者Tong, M, Chen, Z, Gao, X.
登録日2022-12-02
公開日2023-11-29
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Bacteroides fragilis ubiquitin homologue drives intraspecies bacterial competition in the gut microbiome.
Nat Microbiol, 9, 2024
8HM3
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BU of 8hm3 by Molmil
Complex of PPIase-BfUbb
分子名称: GLYCEROL, MAGNESIUM ION, Peptidylprolyl isomerase, ...
著者Xu, J.H, Chen, Z, Gao, X.
登録日2022-12-02
公開日2023-11-29
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Bacteroides fragilis ubiquitin homologue drives intraspecies bacterial competition in the gut microbiome.
Nat Microbiol, 9, 2024
8HM2
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BU of 8hm2 by Molmil
Crystal structure of human ubiquitin-like protein from bacteroides fragilis c terminal cysteine mutant
分子名称: Putative ubiquitin
著者Tong, M, Chen, Z, Gao, X.
登録日2022-12-02
公開日2023-11-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Bacteroides fragilis ubiquitin homologue drives intraspecies bacterial competition in the gut microbiome.
Nat Microbiol, 9, 2024
8HM4
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BU of 8hm4 by Molmil
Crystal structure of PPIase
分子名称: Peptidylprolyl isomerase
著者Xu, J.H, Chen, Z, Gao, X.
登録日2022-12-02
公開日2023-11-29
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (3.79 Å)
主引用文献Bacteroides fragilis ubiquitin homologue drives intraspecies bacterial competition in the gut microbiome.
Nat Microbiol, 9, 2024
4N9F
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BU of 4n9f by Molmil
Crystal structure of the Vif-CBFbeta-CUL5-ElOB-ElOC pentameric complex
分子名称: Core-binding factor subunit beta, Cullin-5, Transcription elongation factor B polypeptide 1, ...
著者Guo, Y.Y, Dong, L.Y, Huang, Z.W.
登録日2013-10-21
公開日2014-01-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural basis for hijacking CBF-b and CUL5 E3 ligase complex by HIV-1 Vif
Nature, 505, 2014
3SR9
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BU of 3sr9 by Molmil
Crystal structure of mouse PTPsigma
分子名称: Receptor-type tyrosine-protein phosphatase S
著者Wang, J, Hou, L, Li, J, Ding, J.
登録日2011-07-07
公開日2012-05-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural insights into the homology and differences between mouse protein tyrosine phosphatase-sigma and human protein tyrosine phosphatase-sigma
Acta Biochim.Biophys.Sin., 43, 2011
9CS3
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BU of 9cs3 by Molmil
TRiC-ADP-S2 state is a conformation when TRiC incubated in 1 mM ADP
分子名称: T-complex protein 1 subunit alpha, T-complex protein 1 subunit beta, T-complex protein 1 subunit delta, ...
著者Jin, M, Cong, Y.
登録日2024-07-23
公開日2025-01-22
最終更新日2025-05-21
実験手法ELECTRON MICROSCOPY (5.6 Å)
主引用文献The conformational landscape of TRiC ring-opening and its underlying stepwise mechanism revealed by cryo-EM.
Qrb Discov, 6, 2025
9CSA
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BU of 9csa by Molmil
TRiC-ATP-AlFx
分子名称: T-complex protein 1 subunit alpha, T-complex protein 1 subunit beta, T-complex protein 1 subunit delta, ...
著者Jin, M, Cong, Y.
登録日2024-07-23
公開日2025-01-22
最終更新日2025-06-04
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献The conformational landscape of TRiC ring-opening and its underlying stepwise mechanism revealed by cryo-EM.
Qrb Discov, 6, 2025

 

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