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5EC3
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BU of 5ec3 by Molmil
Structural insight into the catalyitc mechanism of human 4-Hydroxyphenylpyruvate dioxygenase
分子名称: 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Yang, W.C, Yang, G.F.
登録日2015-10-20
公開日2015-11-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural insight into the catalyitc mechanism of human 4-Hydroxyphenylpyruvate dioxygenase
To be published
5YY7
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BU of 5yy7 by Molmil
Crystal structure of Arabidopsis thaliana HPPD complexed with Benquitrione
分子名称: 3-(2,6-dimethylphenyl)-1-methyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Yang, W.C, Chen, J.N, Yang, G.F.
登録日2017-12-08
公開日2019-01-16
実験手法X-RAY DIFFRACTION (3.298 Å)
主引用文献Crystal structure of Arabidopsis thaliana HPPD complexed with Benquitrione (Y13161)
To be published
5YWI
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BU of 5ywi by Molmil
Crystal structure of Arabidopsis thaliana HPPD Truncated mutant complexed with NTBC
分子名称: 2-{HYDROXY[2-NITRO-4-(TRIFLUOROMETHYL)PHENYL]METHYLENE}CYCLOHEXANE-1,3-DIONE, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Yang, W.C, Chen, J.N.
登録日2017-11-29
公開日2019-01-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.58 Å)
主引用文献Crystal structure of Arabidopsis thaliana HPPD Truncated mutant complexed with NTBC
To be published
5YWH
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BU of 5ywh by Molmil
Crystal structure of Arabidopsis thaliana HPPD complexed with Y13508
分子名称: 4-hydroxyphenylpyruvate dioxygenase, FE (III) ION, [1,3-diethyl-2,2-bis(oxidanylidene)-2$l^{6},1,3-benzothiadiazol-5-yl]-(1-methyl-5-oxidanyl-pyrazol-4-yl)methanone
著者Yang, W.C, Lin, H.Y.
登録日2017-11-29
公開日2019-01-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.72 Å)
主引用文献Crystal structure of Arabidopsis thaliana HPPD complexed with Y13508
To be published
5YY6
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BU of 5yy6 by Molmil
Crystal structure of Arabidopsis thaliana HPPD truncated mutant complexed with Benquitrione
分子名称: 3-(2,6-dimethylphenyl)-1-methyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Yang, W.C, Chen, J.N, Yang, G.F.
登録日2017-12-08
公開日2019-01-16
最終更新日2019-10-09
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Crystal Structure of 4-Hydroxyphenylpyruvate Dioxygenase in Complex with Substrate Reveals a New Starting Point for Herbicide Discovery.
Research (Wash D C), 2019, 2019
6ISD
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BU of 6isd by Molmil
Crystal structure of Arabidopsis thaliana HPPD complexed with sulcotrione
分子名称: 2-[2-chloro-4-(methylsulfonyl)benzoyl]cyclohexane-1,3-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Yang, W.C, Yang, G.F.
登録日2018-11-16
公開日2018-11-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular insights into the mechanism of 4-hydroxyphenylpyruvate dioxygenase inhibition: enzyme kinetics, X-ray crystallography and computational simulations.
FEBS J., 286, 2019
6J63
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BU of 6j63 by Molmil
Crystal structure of Arabidopsis thaliana HPPD complexed with NTBC
分子名称: 2-{HYDROXY[2-NITRO-4-(TRIFLUOROMETHYL)PHENYL]METHYLENE}CYCLOHEXANE-1,3-DIONE, 4-hydroxyphenylpyruvate dioxygenase, FE (III) ION
著者Yang, W.C, Yang, G.F.
登録日2019-01-13
公開日2019-02-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.624 Å)
主引用文献Molecular insights into the mechanism of 4-hydroxyphenylpyruvate dioxygenase inhibition: enzyme kinetics, X-ray crystallography and computational simulations.
FEBS J., 286, 2019
5YWK
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BU of 5ywk by Molmil
Crystal structure of Arabidopsis thaliana HPPD complexed with Benquitrione-Methyl
分子名称: 1,5-dimethyl-3-(2-methylphenyl)-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Yang, W.C, Lin, H.Y.
登録日2017-11-29
公開日2019-01-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.804 Å)
主引用文献Structure-Guided Discovery of Silicon-Containing Subnanomolar Inhibitor of Hydroxyphenylpyruvate Dioxygenase as a Potential Herbicide.
J.Agric.Food Chem., 69, 2021
5XGK
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BU of 5xgk by Molmil
Crystal structure of Arabidopsis thaliana 4-hydroxyphenylpyruvate dioxygenase (AtHPPD) complexed with its substrate 4-hydroxyphenylpyruvate acid (HPPA)
分子名称: (2S)-2-hydroxy-3-(4-hydroxyphenyl)propanoic acid, 4-hydroxyphenylpyruvate dioxygenase, ACETATE ION, ...
著者Yang, G.F, Yang, W.C, Lin, H.Y.
登録日2017-04-14
公開日2018-09-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structure of 4-Hydroxyphenylpyruvate Dioxygenase in Complex with Substrate Reveals a New Starting Point for Herbicide Discovery.
Res, 2019, 2019
5YWG
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BU of 5ywg by Molmil
Crystal structure of Arabidopsis thaliana HPPD complexed with Mesotrione
分子名称: 2-[(4-methylsulfonyl-2-nitro-phenyl)-oxidanyl-methylidene]cyclohexane-1,3-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Lin, H.Y, Yang, W.C.
登録日2017-11-29
公開日2019-01-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.603 Å)
主引用文献Molecular insights into the mechanism of 4-hydroxyphenylpyruvate dioxygenase inhibition: enzyme kinetics, X-ray crystallography and computational simulations.
FEBS J., 286, 2019
6LGT
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BU of 6lgt by Molmil
Complex structure of HPPD with an inhibitor Y16542
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 3-(2-chlorophenyl)-6-(1,3-dimethyl-5-oxidanyl-pyrazol-4-yl)carbonyl-1,5-dimethyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, ...
著者Lin, H.Y, Yang, W.C, Yang, G.F.
登録日2019-12-05
公開日2020-10-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.794 Å)
主引用文献Discovery of Novel Pyrazole-Quinazoline-2,4-dione Hybrids as 4-Hydroxyphenylpyruvate Dioxygenase Inhibitors.
J.Agric.Food Chem., 68, 2020
8HOW
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BU of 8how by Molmil
Crystal structure of AtHPPD-Y191052 complex
分子名称: 1,5-dimethyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-3-(2-phenylethyl)quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Yang, G.-F, Lin, H.-Y, Dong, J.
登録日2022-12-11
公開日2023-01-25
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Discovery of Subnanomolar Inhibitors of 4-Hydroxyphenylpyruvate Dioxygenase via Structure-Based Rational Design.
J.Agric.Food Chem., 71, 2023
3TGU
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BU of 3tgu by Molmil
Cytochrome bc1 complex from chicken with pfvs-designed moa inhibitor bound
分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CARDIOLIPIN, Coenzyme Q10, ...
著者Huang, L.-S, Yang, G.-F, Berry, E.A.
登録日2011-08-17
公開日2012-07-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Computational discovery of picomolar Q(o) site inhibitors of cytochrome bc1 complex.
J.Am.Chem.Soc., 134, 2012
7E0X
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BU of 7e0x by Molmil
Crystal structure of Arabidopsis thaliana HPPD complexed with 4-hydroxyphenylacetic acid
分子名称: 4-HYDROXYPHENYLACETATE, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Lin, H.Y, Yang, G.F.
登録日2021-01-28
公開日2021-12-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.887 Å)
主引用文献Rational Redesign of Enzyme via the Combination of Quantum Mechanics/Molecular Mechanics, Molecular Dynamics, and Structural Biology Study.
J.Am.Chem.Soc., 143, 2021
7CQR
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BU of 7cqr by Molmil
Complex structure of HPPD with Y16550
分子名称: 3-(3-chlorophenyl)-6-[(2,5-dimethyl-3-oxidanylidene-1~{H}-pyrazol-4-yl)carbonyl]-1,5-dimethyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Lin, H.Y, Yang, G.F.
登録日2020-08-11
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.947 Å)
主引用文献Structural insights of 4-Hydrophenylpyruvate dioxygenase inhibition by structurally diverse small molecules
Adv Agrochem, 2022
7CQS
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BU of 7cqs by Molmil
Complex structure of HPPD with Topramezone
分子名称: 4-[3-(4,5-dihydro-1,2-oxazol-3-yl)-2-methyl-4-methylsulfonyl-phenyl]carbonyl-2-methyl-1~{H}-pyrazol-3-one, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Lin, H.Y, Yang, G.F.
登録日2020-08-11
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.998 Å)
主引用文献Structural insights of 4-Hydrophenylpyruvate dioxygenase inhibition by structurally diverse small molecules
Adv Agrochem, 2022
8IM2
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BU of 8im2 by Molmil
Crystal structure of human HPPD complexed with NTBC
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-{HYDROXY[2-NITRO-4-(TRIFLUOROMETHYL)PHENYL]METHYLENE}CYCLOHEXANE-1,3-DIONE, 4-hydroxyphenylpyruvate dioxygenase, ...
著者Dong, J, Lin, H.-Y, Yang, G.-F.
登録日2023-03-05
公開日2023-10-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Structure-based discovery of pyrazole-benzothiadiazole hybrid as human HPPD inhibitors.
Structure, 31, 2023
6M6D
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BU of 6m6d by Molmil
Structure of HPPD complexed with a synthesized inhibitor
分子名称: 1,5-dimethyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-3-(3-trimethylsilylprop-2-ynyl)quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Lin, H.-Y, Yang, W.-C, Yang, G.-F.
登録日2020-03-14
公開日2021-03-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.842 Å)
主引用文献Structure-Guided Discovery of Silicon-Containing Subnanomolar Inhibitor of Hydroxyphenylpyruvate Dioxygenase as a Potential Herbicide.
J.Agric.Food Chem., 69, 2021
8IM3
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BU of 8im3 by Molmil
Crystal structure of human HPPD complexed with compound a10
分子名称: 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION, [1,3-diethyl-2,2-bis(oxidanylidene)-2$l^{6},1,3-benzothiadiazol-5-yl]-(1-methyl-5-oxidanyl-pyrazol-4-yl)methanone
著者Dong, J, Lin, H.-Y.
登録日2023-03-05
公開日2023-10-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献Structure-based discovery of pyrazole-benzothiadiazole hybrid as human HPPD inhibitors.
Structure, 31, 2023
6JX9
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BU of 6jx9 by Molmil
Structure of Y17107 complexed HPPD
分子名称: 4-hydroxyphenylpyruvate dioxygenase, 5-[(~{Z})-(1,3-dimethyl-5-oxidanylidene-pyrazol-4-ylidene)-oxidanyl-methyl]-2-(phenylmethyl)isoindole-1,3-dione, COBALT (II) ION
著者Lin, H.Y, Yang, G.F.
登録日2019-04-22
公開日2020-03-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Pyrazole-Isoindoline-1,3-dione Hybrid: A Promising Scaffold for 4-Hydroxyphenylpyruvate Dioxygenase Inhibitors.
J.Agric.Food Chem., 67, 2019
7VO8
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BU of 7vo8 by Molmil
Structure of AtHPPD complexed with LSY-1
分子名称: 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION, N-[6-[[9-(dimethylamino)-12H-benzo[a]phenoxazin-5-yl]amino]hexyl]-4-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-3-[oxidanyl(oxidanylidene)-$l^4-azanyl]benzamide
著者Yang, G.-F, Dong, J.
登録日2021-10-12
公開日2022-09-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献In vivo diagnostics of abiotic plant stress responses via in situ real-time fluorescence imaging
Plant Physiol., 190, 2022
7WJ8
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BU of 7wj8 by Molmil
Complex structure of AtHPPD-PyQ1
分子名称: 2-pyren-1-yloxyethyl 2-[1,5-dimethyl-2,4-bis(oxidanylidene)-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazolin-3-yl]ethanoate, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Yang, G.-F, Lin, H.-Y, Dong, J.
登録日2022-01-05
公開日2022-09-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.805 Å)
主引用文献Design of an HPPD fluorescent probe and visualization of plant responses to abiotic stress
Adv Agrochem, 2022
7WJJ
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BU of 7wjj by Molmil
Complex structure of AtHPPD-PyQ2
分子名称: 2-[1,5-dimethyl-2,4-bis(oxidanylidene)-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazolin-3-yl]-N-(2-pyren-1-yloxyethyl)ethanamide, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Yang, G.-F, Lin, H.-Y, Dong, J.
登録日2022-01-06
公開日2022-09-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.603 Å)
主引用文献Design of an HPPD fluorescent probe and visualization of plant responses to abiotic stress
Adv Agrochem, 2022
7X7L
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BU of 7x7l by Molmil
Crystal structure of ZmHPPD-Y13161 complex
分子名称: 3-(2,6-dimethylphenyl)-1-methyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Lin, H.-Y, Dong, J, Yang, G.-F.
登録日2022-03-09
公開日2022-06-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.887 Å)
主引用文献Structural insights of 4-Hydrophenylpyruvate dioxygenase inhibition by structurally diverse small molecules
Adv Agrochem, 2022
7X5W
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BU of 7x5w by Molmil
Crystal structure of AtHPPD-Y18022 complex
分子名称: 1,5-dimethyl-3-naphthalen-1-yl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Lin, H.-Y, Dong, J, Yang, G.-F.
登録日2022-03-05
公開日2022-06-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.598 Å)
主引用文献Structural insights of 4-Hydrophenylpyruvate dioxygenase inhibition by structurally diverse small molecules
Adv Agrochem, 2022

 

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