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5TBX
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BU of 5tbx by Molmil
hnRNP A18 RNA Recognition Motif
分子名称: ACETATE ION, Cold-inducible RNA-binding protein, NICKEL (II) ION
著者Coburn, K.M, Melville, Z, Aligholizadeh, E, Roth, B.M, Varney, K.M, Weber, D.J.
登録日2016-09-13
公開日2017-04-12
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.767 Å)
主引用文献Crystal structure of the human heterogeneous ribonucleoprotein A18 RNA-recognition motif.
Acta Crystallogr F Struct Biol Commun, 73, 2017
1XYD
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BU of 1xyd by Molmil
NMR Solution Structure of Rat Zinc-Calcium-S100B, 20 Structures
分子名称: CALCIUM ION, S-100 protein, beta chain, ...
著者Wilder, P.T, Varney, K.M, Weber, D.J.
登録日2004-11-09
公開日2005-06-07
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution Structure of Zinc- and Calcium-Bound Rat S100B as Determined by Nuclear Magnetic Resonance Spectroscopy
Biochemistry, 44, 2005
1ZFS
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BU of 1zfs by Molmil
Solution structure of S100A1 bound to calcium
分子名称: CALCIUM ION, S-100 protein, alpha chain
著者Wright, N.T, Varney, K.M, Weber, D.J.
登録日2005-04-20
公開日2006-04-11
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The three-dimensional solution structure of Ca(2+)-bound S100A1 as determined by NMR spectroscopy
J.Mol.Biol., 353, 2006
5DKN
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BU of 5dkn by Molmil
Crystal Structure of Calcium-loaded S100B bound to SBi4225
分子名称: 2,2'-[heptane-1,7-diylbis(oxybenzene-4,1-diyl)]bis(1H-imidazole), CALCIUM ION, Protein S100-B
著者Cavalier, M.C, Ansari, M.I, Pierce, A.D, Wilder, P.T, McKnight, L.E, Raman, E.P, Neau, D.B, Bezawada, P, Alasady, M.J, Varney, K.M, Toth, E.A, MacKerell Jr, A.D, Coop, A, Weber, D.J.
登録日2015-09-03
公開日2016-01-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.528 Å)
主引用文献Small Molecule Inhibitors of Ca(2+)-S100B Reveal Two Protein Conformations.
J.Med.Chem., 59, 2016
5DKR
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BU of 5dkr by Molmil
Crystal Structure of Calcium-loaded S100B bound to SBi29
分子名称: 2-[4-(4-carbamimidoylphenoxy)phenyl]-1H-indole-6-carboximidamide, CALCIUM ION, Protein S100-B
著者Cavalier, M.C, Ansari, M.I, Pierce, A.D, Wilder, P.T, McKnight, L.E, Raman, E.P, Neau, D.B, Bezawada, P, Alasady, M.J, Varney, K.M, Toth, E.A, MacKerell Jr, A.D, Coop, A, Weber, D.J.
登録日2015-09-03
公開日2016-01-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.742 Å)
主引用文献Small Molecule Inhibitors of Ca(2+)-S100B Reveal Two Protein Conformations.
J.Med.Chem., 59, 2016
5DKQ
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BU of 5dkq by Molmil
Crystal Structure of Calcium-loaded S100B bound to SBi4214
分子名称: 2,2'-[pentane-1,5-diylbis(oxybenzene-4,1-diyl)]di-1,4,5,6-tetrahydropyrimidine, CALCIUM ION, Protein S100-B
著者Cavalier, M.C, Ansari, M.I, Pierce, A.D, Wilder, P.T, McKnight, L.E, Raman, E.P, Neau, D.B, Bezawada, P, Alasady, M.J, Varney, K.M, Toth, E.A, MacKerell Jr, A.D, Coop, A, Weber, D.J.
登録日2015-09-03
公開日2016-01-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.591 Å)
主引用文献Small Molecule Inhibitors of Ca(2+)-S100B Reveal Two Protein Conformations.
J.Med.Chem., 59, 2016
2KBM
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BU of 2kbm by Molmil
Ca-S100A1 interacting with TRTK12
分子名称: CALCIUM ION, F-actin-capping protein subunit alpha-2, Protein S100-A1
著者Wright, N.T, Varney, K.M, Cannon, B.R, Morgan, M, Weber, D.J.
登録日2008-12-02
公開日2009-02-10
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of Ca-S100A1-TRTK12
To be Published
2JUB
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BU of 2jub by Molmil
Solution structure of IPI*
分子名称: Internal protein I
著者Rifat, D, Wright, N.T, Varney, K.M, Weber, D.J, Black, L.W.
登録日2007-08-17
公開日2007-12-11
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Restriction endonuclease inhibitor IPI* of bacteriophage T4: a novel structure for a dedicated target.
J.Mol.Biol., 375, 2008
2JVU
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BU of 2jvu by Molmil
Solution Structure of Dispersin from Enteroaggregative Escherichia coli
分子名称: DISPERSIN
著者Velarde, J.J, Varney, K.M, Farfan, K, Dudley, D, Inman, J.G, Fletcher, J, Weber, D.J, Nataro, J.P.
登録日2007-09-25
公開日2008-02-12
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Solution structure of the novel dispersin protein of enteroaggregative Escherichia coli.
Mol.Microbiol., 66, 2007
2K2F
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BU of 2k2f by Molmil
Solution structure of Ca2+-S100A1-RyRP12
分子名称: CALCIUM ION, Protein S100-A1, Ryanodine receptor 1 peptide
著者Wright, N.T, Varney, K.M, Weber, D.J.
登録日2008-04-01
公開日2008-07-29
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献S100A1 and Calmodulin Compete for the Same Binding Site on Ryanodine Receptor.
J.Biol.Chem., 283, 2008
5FF8
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BU of 5ff8 by Molmil
TDG enzyme-product complex
分子名称: DNA, G/T mismatch-specific thymine DNA glycosylase
著者Pozharski, E, Malik, S.S, Drohat, A.C.
登録日2015-12-18
公開日2016-09-28
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis of damage recognition by thymine DNA glycosylase: Key roles for N-terminal residues.
Nucleic Acids Res., 44, 2016
7TC3
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BU of 7tc3 by Molmil
Human APE1 in the apo form
分子名称: 1,2-ETHANEDIOL, DNA-(apurinic or apyrimidinic site) endonuclease, mitochondrial
著者Pidugu, L.S, Pozharski, E, Drohat, A.C.
登録日2021-12-22
公開日2022-12-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.252 Å)
主引用文献Characterizing inhibitors of human AP endonuclease 1.
Plos One, 18, 2023
7TC2
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BU of 7tc2 by Molmil
Human APE1 in complex with 5-nitroindole-2-carboxylic acid
分子名称: 1,2-ETHANEDIOL, 5-nitro-1H-indole-2-carboxylic acid, DI(HYDROXYETHYL)ETHER, ...
著者Pidugu, L.S, Pozharski, E, Drohat, A.C.
登録日2021-12-22
公開日2022-12-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Characterizing inhibitors of human AP endonuclease 1.
Plos One, 18, 2023
4XEG
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BU of 4xeg by Molmil
Structure of the enzyme-product complex resulting from TDG action on a G/hmU mismatch
分子名称: 1,2-ETHANEDIOL, ACETIC ACID, DNA (28-MER), ...
著者Pozharski, E, Malik, S.S, Drohat, A.C.
登録日2014-12-23
公開日2015-09-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Thymine DNA glycosylase exhibits negligible affinity for nucleobases that it removes from DNA.
Nucleic Acids Res., 43, 2015
5HF7
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BU of 5hf7 by Molmil
TDG enzyme-substrate complex
分子名称: DNA (28-MER), G/T mismatch-specific thymine DNA glycosylase
著者Pozharski, E, Malik, S.S, Drohat, A.C.
登録日2016-01-06
公開日2016-09-28
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Structural basis of damage recognition by thymine DNA glycosylase: Key roles for N-terminal residues.
Nucleic Acids Res., 44, 2016
2Q91
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BU of 2q91 by Molmil
Structure of the Ca2+-Bound Activated Form of the S100A4 Metastasis Factor
分子名称: CALCIUM ION, S100A4 Metastasis Factor
著者Malashkevich, V.N, Knight, D, Ramagopal, U.A, Almo, S.C, Bresnick, A.R.
登録日2007-06-12
公開日2008-02-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Structure of Ca(2+)-Bound S100A4 and Its Interaction with Peptides Derived from Nonmuscle Myosin-IIA.
Biochemistry, 47, 2008
4DIR
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BU of 4dir by Molmil
2.6 Angstrom X-ray structure of human CA(2+)-S100A5
分子名称: CALCIUM ION, Protein S100-A5
著者Liriano, M.A, Toth, E.A, Weber, D.J.
登録日2012-01-31
公開日2013-02-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Target-binding to S100A5 changes Ca(2+)-binding affinity and dynamics.
To be Published
8EKM
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BU of 8ekm by Molmil
Clostridioides difficile binary toxin translocase CDTb double mutant - D623A D734A
分子名称: ADP-ribosyltransferase binding component, CALCIUM ION
著者Abeyawardhane, D.L, Pozharski, E.
登録日2022-09-21
公開日2023-09-27
実験手法ELECTRON MICROSCOPY (3.56 Å)
主引用文献Calcium-mediated Pore Formation of Clostridioides difficile Binary Toxin
To Be Published
8EKL
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BU of 8ekl by Molmil
Clostridioides difficile binary toxin translocase CDTb wild-type after calcium depletion from receptor binding domain 1 (RBD1) - Class 1
分子名称: ADP-ribosyltransferase binding component, CALCIUM ION
著者Abeyawardhane, D.L, Pozharski, E.
登録日2022-09-21
公開日2023-09-27
実験手法ELECTRON MICROSCOPY (3.06 Å)
主引用文献Calcium-mediated Pore Formation of Clostridioides difficile Binary Toxin
To Be Published
8EKK
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BU of 8ekk by Molmil
Clostridioides difficile binary toxin translocase CDTb wild-type after calcium depletion from receptor binding domain 1 (RBD1) - Class 2
分子名称: ADP-ribosyltransferase binding component, CALCIUM ION
著者Abeyawardhane, D.L, Pozharski, E.
登録日2022-09-21
公開日2023-09-27
実験手法ELECTRON MICROSCOPY (3.28 Å)
主引用文献Calcium-mediated Pore Formation of Clostridioides difficile Binary Toxin
To Be Published
3LLE
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BU of 3lle by Molmil
X-ray structure of bovine SC0322,Ca(2+)-S100B
分子名称: 13-methyl-13,14-dihydro[1,3]benzodioxolo[5,6-c][1,3]dioxolo[4,5-i]phenanthridine, CALCIUM ION, Protein S100-B
著者Charpentier, T.H, Weber, D.J, Wilder, P.W.
登録日2010-01-28
公開日2010-12-29
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献In vitro screening and structural characterization of inhibitors of the S100B-p53 interaction.
Int.J.High Throughput Screen, 2010, 2010
3LK1
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BU of 3lk1 by Molmil
X-ray structure of bovine SC0322,Ca(2+)-S100B
分子名称: 2-sulfanylbenzoic acid, CALCIUM ION, ETHYL MERCURY ION, ...
著者Charpentier, T.H, Weber, D.J, Wilder, P.W.
登録日2010-01-26
公開日2010-12-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献In vitro screening and structural characterization of inhibitors of the S100B-p53 interaction.
Int J High Throughput Screen, 2010, 2010
3LK0
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BU of 3lk0 by Molmil
X-ray structure of bovine SC0067,Ca(2+)-S100B
分子名称: 3-(2-chloro-10H-phenothiazin-10-yl)-N,N-dimethylpropan-1-amine, CALCIUM ION, Protein S100-B
著者Charpentier, T.H, Weber, D.J, Wilder, P.W.
登録日2010-01-26
公開日2010-12-29
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献In vitro screening and structural characterization of inhibitors of the S100B-p53 interaction.
Int J High Throughput Screen, 2010, 2010
5CYS
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BU of 5cys by Molmil
Structure of the enzyme-product complex resulting from TDG action on a GcaC mismatch
分子名称: ACETIC ACID, DNA (28-MER), G/T mismatch-specific thymine DNA glycosylase
著者Pozharski, E, Malik, S.S, Drohat, A.C.
登録日2015-07-30
公開日2015-09-16
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Characterizing the enzyme-product complexes of thymine DNA glycosylase using crystallography and NMR
Nucleic Acids Res., 2015
3KO0
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BU of 3ko0 by Molmil
Structure of the tfp-ca2+-bound activated form of the s100a4 Metastasis factor
分子名称: 10-[3-(4-METHYL-PIPERAZIN-1-YL)-PROPYL]-2-TRIFLUOROMETHYL-10H-PHENOTHIAZINE, CALCIUM ION, Protein S100-A4
著者Malashkevich, V.N, Dulyaninova, N.G, Knight, D, Almo, S.C, Bresnick, A.R.
登録日2009-11-12
公開日2010-05-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Phenothiazines inhibit S100A4 function by inducing protein oligomerization.
Proc.Natl.Acad.Sci.USA, 107, 2010

 

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