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9CUW
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Crystal Structure of SETDB1 Tudor domain in complex with UNC100013
分子名称: (2E)-4-(dimethylamino)-N-(4-{[6-(dimethylamino)hexyl]amino}-2-{[5-(dimethylamino)pentyl]amino}quinazolin-6-yl)but-2-enamide, 1,2-ETHANEDIOL, Histone-lysine N-methyltransferase SETDB1, ...
著者Silva, M, Dong, A, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
登録日2024-07-26
公開日2024-10-02
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Crystal Structure of SETDB1 Tudor domain in complex with UNC100013
To be published
1MZV
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Crystal Structure of Adenine Phosphoribosyltransferase (APRT) From Leishmania tarentolae
分子名称: ADENOSINE MONOPHOSPHATE, Adenine Phosphoribosyltransferase, PHOSPHATE ION
著者Thiemann, O.H, Silva, M, Oliva, G, Silva, C.H.T.P, Iulek, J.
登録日2002-10-10
公開日2003-10-28
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of adenine phosphoribosyltransferase from Leishmania tarentolae: potential implications for APRT catalytic mechanism.
Biochim.Biophys.Acta, 1696, 2004
1ORE
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Human Adenine Phosphoribosyltransferase
分子名称: ADENOSINE MONOPHOSPHATE, Adenine phosphoribosyltransferase, CHLORIDE ION
著者Thiemann, O.H, Silva, M, Oliva, G, Silva, C.H.T.P, Iulek, J.
登録日2003-03-12
公開日2004-03-30
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Three-dimensional structure of human adenine phosphoribosyltransferase and its relation to DHA-urolithiasis.
Biochemistry, 43, 2004
4UT3
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BU of 4ut3 by Molmil
X-ray structure of the human PP1 gamma catalytic subunit treated with hydrogen peroxide
分子名称: MANGANESE (II) ION, PHOSPHATE ION, SERINE/THREONINE-PROTEIN PHOSPHATASE PP1-GAMMA CATALYTIC SUBUNIT
著者Zeh Silva, M, Kopec, J, Fotinou, D, Steiner, R.A.
登録日2014-07-17
公開日2015-07-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Targeted Redox Inhibition of Protein Phosphatase 1 by Nox4 Regulates Eif2Alpha-Mediated Stress Signaling.
Embo J., 35, 2016
4UT2
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X-ray structure of the human PP1 gamma catalytic subunit treated with ascorbate
分子名称: MANGANESE (II) ION, PHOSPHATE ION, SERINE/THREONINE-PROTEIN PHOSPHATASE PP1-GAMMA CATALYTIC SUBUNIT
著者Kopec, J, Zeh Silva, M, Fotinou, C, Steiner, R.A.
登録日2014-07-17
公開日2015-07-22
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Targeted Redox Inhibition of Protein Phosphatase 1 by Nox4 Regulates Eif2Alpha-Mediated Stress Signaling.
Embo J., 35, 2016
1ZN7
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Human Adenine Phosphoribosyltransferase Complexed with PRPP, ADE and R5P
分子名称: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, 5-O-phosphono-alpha-D-ribofuranose, ADENINE, ...
著者Iulek, J, Silva, M, Tomich, C.H.T.P, Thiemann, O.H.
登録日2005-05-11
公開日2006-04-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Structural Complexes of Human Adenine Phosphoribosyltransferase Reveal Novel Features of the APRT Catalytic Mechanism
J.Biomol.Struct.Dyn., 25, 2008
1ZN8
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Human Adenine Phosphoribosyltransferase Complexed with AMP, in Space Group P1 at 1.76 A Resolution
分子名称: ADENOSINE MONOPHOSPHATE, Adenine phosphoribosyltransferase, CHLORIDE ION
著者Iulek, J, Silva, M, Tomich, C.H.T.P, Thiemann, O.H.
登録日2005-05-11
公開日2006-04-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Structural Complexes of Human Adenine Phosphoribosyltransferase Reveal Novel Features of the APRT Catalytic Mechanism
J.Biomol.Struct.Dyn., 25, 2008
1ZN9
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Human Adenine Phosphoribosyltransferase in Apo and AMP Complexed Forms
分子名称: ADENOSINE MONOPHOSPHATE, Adenine phosphoribosyltransferase
著者Iulek, J, Silva, M, Tomich, C.H.T.P, Thiemann, O.H.
登録日2005-05-11
公開日2006-04-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural Complexes of Human Adenine Phosphoribosyltransferase Reveal Novel Features of the APRT Catalytic Mechanism
J.Biomol.Struct.Dyn., 25, 2008
1XCE
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Helica Structure of DNA by Design: The T(GGGG)T Hexad Alignment
分子名称: 5'-D(*GP*CP*GP*GP*TP*TP*GP*GP*AP*T)-3'
著者Webba da Silva, M.
登録日2004-09-01
公開日2005-02-08
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Experimental Demonstration of T:(G:G:G):T Hexad and T:A:A:T Tetrad Alignments within a DNA Quadruplex Stem
Biochemistry, 44, 2005
7JH0
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Crystallographic structure of glyceraldehyde-3-phosphate dehydrogenase from Schistosoma mansoni
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Boreiko, S, Silva, M, Iulek, J.
登録日2020-07-20
公開日2021-02-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Structure determination and analyses of the GAPDH from the parasite Schistosoma mansoni, the first one from a platyhelminth.
Biochimie, 184, 2021
7U4S
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Structure of Glyceraldehyde-3-Phosphate Dehydrogenase from Candida albicans
分子名称: GLYCEROL, Glyceraldehyde-3-phosphate dehydrogenase
著者Miranda, R.R, Silva, M, Iulek, J.
登録日2022-02-28
公開日2022-04-27
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Expression, purification, crystallization and structure of Glyceraldehyde-3-Phosphate Dehydrogenase from Candida albicans, main causative agent of candidiasis
Chem. Data Coll., 39, 2022
5J4P
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DIY G-Quadruplexes: Solution structure of d(GGTTTGGTTTTGGTTTGG) in sodium
分子名称: DNA (5'-D(*GP*GP*TP*TP*TP*GP*GP*TP*TP*TP*TP*GP*GP*TP*TP*TP*GP*G)-3')
著者Dvorkin, S.A, Webba da Silva, M.
登録日2016-04-01
公開日2017-06-14
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Encoding canonical DNA quadruplex structure.
Sci Adv, 4, 2018
5J4W
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DIY G-Quadruplexes: Solution structure of d(GGTTTGGTTTTGGTTGG) in sodium
分子名称: DNA (5'-D(*GP*GP*TP*TP*TP*GP*GP*TP*TP*TP*TP*GP*GP*TP*TP*GP*G)-3')
著者Dvorkin, S.A, Webba da Silva, M.
登録日2016-04-01
公開日2017-04-12
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Encoding canonical DNA quadruplex structure.
Sci Adv, 4, 2018
5J6U
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DIY G-Quadruplexes: Solution Structure of d(GGGGTTTGGGGTTTTGGGGAAGGGG) in sodium
分子名称: DNA (25-MER)
著者Dvorkin, S.A, Karsisiotis, A.I, Webba da Silva, M.
登録日2016-04-05
公開日2017-05-10
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Encoding canonical DNA quadruplex structure.
Sci Adv, 4, 2018
5J05
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DIY G-Quadruplexes: Solution structure of d(GGGTTTGGGTTTTGGGAGGG) in sodium
分子名称: DNA (5'-D(*GP*GP*GP*TP*TP*TP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*AP*GP*GP*G)-3')
著者Dvorkin, S.A, Karsisiotis, A.I, Webba da Silva, M.
登録日2016-03-27
公開日2017-04-05
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Encoding canonical DNA quadruplex structure.
Sci Adv, 4, 2018
2LED
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Unique structural features of interconverting monomeric and dimeric G-quadruplexes adopted by a sequence from intron of N-myc gene
分子名称: DNA (5'-D(*TP*AP*GP*GP*GP*CP*GP*GP*GP*AP*GP*GP*GP*AP*GP*GP*GP*AP*A)-3')
著者Trajkovski, M, Plavec, J, Webba da Silva, M.
登録日2011-06-15
公開日2012-03-14
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Unique Structural Features of Interconverting Monomeric and Dimeric G-Quadruplexes Adopted by a Sequence from the Intron of the N-myc Gene.
J.Am.Chem.Soc., 134, 2012
2LEE
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Unique structural features of interconverting monomeric and dimeric G-quadruplexes adopted by a sequence from intron of N-myc gene
分子名称: DNA (5'-D(*TP*AP*GP*GP*GP*CP*GP*GP*GP*AP*GP*GP*GP*AP*GP*GP*GP*AP*A)-3')
著者Trajkovski, M, Plavec, J, Webba da Silva, M.
登録日2011-06-15
公開日2012-03-14
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Unique Structural Features of Interconverting Monomeric and Dimeric G-Quadruplexes Adopted by a Sequence from the Intron of the N-myc Gene.
J.Am.Chem.Soc., 134, 2012
5UR0
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Crystallographic structure of glyceraldehyde-3-phosphate dehydrogenase from Naegleria gruberi
分子名称: Glyceraldehyde-3-phosphate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION, ...
著者Machado, A.T.P, Silva, M, Iulek, J.
登録日2017-02-09
公開日2018-03-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Structural studies of glyceraldehyde-3-phosphate dehydrogenase from Naegleria gruberi, the first one from phylum Percolozoa.
Biochim. Biophys. Acta, 1866, 2018
1N4B
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Solution Structure of the undecamer CGAAAC*TTTCG
分子名称: 5'-D(*CP*GP*AP*AP*AP*CP*TP*TP*TP*CP*G)-3', 5'-D(*CP*GP*AP*AP*AP*D00*TP*TP*TP*CP*G)-3'
著者Webba da Silva, M, Noronha, A.M, Noll, D.M, Miller, P.S, Colvin, O.M, Gamcsik, M.P.
登録日2002-10-30
公開日2003-11-04
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution Structure of a DNA Duplex Containing Mispair-Aligned N4C-Ethyl-N4C Interstrand Cross-Linked Cytosines
Biochemistry, 41, 2002
6V6H
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Crystal structure of histidine ammonia-lyase from Trypanosoma cruzi
分子名称: Histidine ammonia-lyase
著者Miranda, R.R, Silva, M, Barison, M.J, Silber, A.M, Iulek, J.
登録日2019-12-05
公開日2020-06-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal structure of histidine ammonia-lyase from Trypanosoma cruzi.
Biochimie, 175, 2020
2M6V
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Solution NMR structure of the d(GGGTTGGGTTTTGGGTGGG) quadruplex in sodium conditions
分子名称: DNA (5'-D(*GP*GP*GP*TP*TP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*TP*GP*GP*G)-3')
著者Karsisiotis, A.I, Webba da Silva, M.
登録日2013-04-10
公開日2014-07-16
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Encoding canonical DNA quadruplex structure.
Sci Adv, 4, 2018
6UEK
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Structure of Urocanate Hydratase from Trypanosoma cruzi in complex with NAD+
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Urocanate hydratase
著者Boreiko, S, Silva, M, Melo, R.F.P, Silber, A.M, Iulek, J.
登録日2019-09-21
公開日2020-01-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Structure of Urocanate Hydratase from the protozoan Trypanosoma cruzi.
Int.J.Biol.Macromol., 146, 2019
1NYD
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Solution structure of DNA quadruplex GCGGTGGAT
分子名称: 5'-D(*GP*CP*GP*GP*TP*GP*GP*AP*T)-3'
著者Webba da Silva, M.
登録日2003-02-12
公開日2004-02-24
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Association of DNA quadruplexes through G:C:G:C tetrads. Solution structure of d(GCGGTGGAT).
Biochemistry, 42, 2003
2MFU
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Solution NMR structure of quadruplex d(TGGGTTTGGGTTGGGTTTGGG) in sodium conditions
分子名称: 5'-D(*TP*GP*GP*GP*TP*TP*TP*GP*GP*GP*TP*TP*GP*GP*GP*TP*TP*TP*GP*GP*G)-3'
著者Karsisiotis, A, Dillon, P, Webba da Silva, M.
登録日2013-10-23
公開日2014-10-29
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution NMR structure of quadruplex d(TGGGTTTGGGTTGGGTTTGGG) in sodium conditions
To be Published
2M6W
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Solution NMR structure of the d(GGGGTTGGGGTTTTGGGGAAGGGG) quadruplex in sodium conditions
分子名称: DNA (5'-D(*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*GP*AP*AP*GP*GP*GP*G)-3')
著者Karsisiotis, A.I, Webba da Silva, M.
登録日2013-04-19
公開日2014-07-23
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Encoding canonical DNA quadruplex structure.
Sci Adv, 4, 2018

 

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