Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5FNA
DownloadVisualize
BU of 5fna by Molmil
Cryo-EM reconstruction of caspase-1 CARD
分子名称: Caspase-1
著者Li, Y, Lu, A, Schmidt, F.I, Yin, Q, Chen, S, Fu, T.M, Tong, A.B, Ploegh, H.L, Mao, Y, Wu, H.
登録日2015-11-11
公開日2016-03-30
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Molecular Basis of Caspase-1 Polymerization and its Inhibition by a Novel Capping Mechanism
Nat.Struct.Mol.Biol., 23, 2016
2QM4
DownloadVisualize
BU of 2qm4 by Molmil
Crystal structure of human XLF/Cernunnos, a non-homologous end-joining factor
分子名称: Non-homologous end-joining factor 1
著者Li, Y, Chirgadze, D.Y, Sibanda, B.L, Bolanos-Garcia, V.M, Davies, O.R, Blundell, T.L.
登録日2007-07-14
公開日2007-12-11
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of human XLF/Cernunnos reveals unexpected differences from XRCC4 with implications for NHEJ.
Embo J., 27, 2008
3KEA
DownloadVisualize
BU of 3kea by Molmil
Structure function studies of vaccinia virus host-range protein K1 reveal a novel ankyrin repeat interaction surface for K1s function
分子名称: K1L
著者Li, Y.
登録日2009-10-25
公開日2010-03-31
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure function studies of vaccinia virus host range protein k1 reveal a novel functional surface for ankyrin repeat proteins.
J.Virol., 84, 2010
4N4Y
DownloadVisualize
BU of 4n4y by Molmil
Structure of Recombinant Cytochrome ba3 Oxidase mutant G232V from Thermus thermophilus
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, COPPER (II) ION, Cytochrome c oxidase polypeptide 2A, ...
著者Li, Y, Chen, Y, Stout, C.D.
登録日2013-10-08
公開日2014-10-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of Recombinant Cytochrome ba3 Oxidase mutant G232V from Thermus thermophilus
To be Published
1WPA
DownloadVisualize
BU of 1wpa by Molmil
1.5 Angstrom crystal structure of human occludin fragment 413-522
分子名称: Occludin
著者Li, Y, Lavie, A, Fanning, A.S, Anderson, J.M.
登録日2004-09-01
公開日2005-09-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of the conserved cytoplasmic C-terminal domain of occludin: identification of the ZO-1 binding surface.
J.Mol.Biol., 352, 2005
4XVJ
DownloadVisualize
BU of 4xvj by Molmil
STRUCTURE OF THE HEPATITIS C VIRUS ENVELOPE GLYCOPROTEIN E2 ANTIGENIC 2 REGION 412-423 BOUND TO THE BROADLY NEUTRALIZING ANTIBODY HC33.1
分子名称: HCV E2 antigen, antibody heavy chain variable domain, antibody light chain variable domain
著者Li, Y, Mariuzza, R.A.
登録日2015-01-27
公開日2015-03-11
最終更新日2016-12-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for penetration of the glycan shield of hepatitis C virus e2 glycoprotein by a broadly neutralizing human antibody.
J.Biol.Chem., 290, 2015
7YTD
DownloadVisualize
BU of 7ytd by Molmil
Cryo-EM structure of four human FcmR bound to IgM-Fc/J
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fas apoptotic inhibitory molecule 3, Immunoglobulin J chain, ...
著者Li, Y, Shen, H, Xiao, J.
登録日2022-08-14
公開日2023-02-01
最終更新日2023-05-03
実験手法ELECTRON MICROSCOPY (3.71 Å)
主引用文献Immunoglobulin M perception by Fc mu R.
Nature, 615, 2023
7YSG
DownloadVisualize
BU of 7ysg by Molmil
Cryo-EM structure of human FcmR bound to sIgM
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fas apoptotic inhibitory molecule 3, ...
著者Li, Y, Shen, H, Xiao, J.
登録日2022-08-12
公開日2023-02-01
最終更新日2023-05-03
実験手法ELECTRON MICROSCOPY (3.18 Å)
主引用文献Immunoglobulin M perception by Fc mu R.
Nature, 615, 2023
7YTC
DownloadVisualize
BU of 7ytc by Molmil
Cryo-EM structure of human FcmR bound to IgM-Fc/J
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fas apoptotic inhibitory molecule 3, Immunoglobulin J chain, ...
著者Li, Y, Shen, H, Xiao, J.
登録日2022-08-14
公開日2023-02-01
最終更新日2023-05-03
実験手法ELECTRON MICROSCOPY (3.39 Å)
主引用文献Immunoglobulin M perception by Fc mu R.
Nature, 615, 2023
7YTE
DownloadVisualize
BU of 7yte by Molmil
crystal structure of human FcmR-D1 bound to IgM C4-domain
分子名称: Fas apoptotic inhibitory molecule 3, Ig mu chain C region secreted form
著者Li, Y, Shen, H, Xiao, J.
登録日2022-08-14
公開日2023-02-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Immunoglobulin M perception by Fc mu R.
Nature, 615, 2023
8W8F
DownloadVisualize
BU of 8w8f by Molmil
human co-transcriptional RNA capping enzyme RNGTT-CMTR1
分子名称: Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1, DNA (36-MER), DNA (45-MER), ...
著者Li, Y, Wang, Q, Xu, Y, Li, Z.
登録日2023-09-02
公開日2024-04-10
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Strcutures of co-transcriptional RNA capping enzymes on paused transcription complex
To Be Published
8W8E
DownloadVisualize
BU of 8w8e by Molmil
human co-transcriptional RNA capping enzyme RNGTT
分子名称: DNA (36-MER), DNA (45-MER), DNA-directed RNA polymerase II subunit E, ...
著者Li, Y, Wang, Q, Xu, Y, Li, Z.
登録日2023-09-02
公開日2024-04-10
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Strcutures of co-transcriptional RNA capping enzymes on paused transcription complex
To Be Published
3L2O
DownloadVisualize
BU of 3l2o by Molmil
Structure-Based Mechanism of Dimerization-Dependent Ubiquitination by the SCFFbx4 Ubiquitin Ligase
分子名称: F-box only protein 4, S-phase kinase-associated protein 1
著者Li, Y, Hao, B.
登録日2009-12-15
公開日2010-02-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis of dimerization-dependent ubiquitination by the SCF(Fbx4) ubiquitin ligase.
J.Biol.Chem., 285, 2010
3KTQ
DownloadVisualize
BU of 3ktq by Molmil
CRYSTAL STRUCTURE OF AN ACTIVE TERNARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS
分子名称: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, DNA (5'-D(*AP*GP*GP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3'), DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*DOC)-3'), ...
著者Li, Y, Waksman, G.
登録日1998-07-28
公開日1999-01-13
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures of open and closed forms of binary and ternary complexes of the large fragment of Thermus aquaticus DNA polymerase I: structural basis for nucleotide incorporation.
EMBO J., 17, 1998
1HQR
DownloadVisualize
BU of 1hqr by Molmil
CRYSTAL STRUCTURE OF A SUPERANTIGEN BOUND TO THE HIGH-AFFINITY, ZINC-DEPENDENT SITE ON MHC CLASS II
分子名称: HLA-DR ALPHA CHAIN, HLA-DR BETA CHAIN, MYELIN BASIC PROTEIN, ...
著者Li, Y, Li, H, Dimasi, N, Schlievert, P, Mariuzza, R.
登録日2000-12-19
公開日2001-01-03
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure of a superantigen bound to the high-affinity, zinc-dependent site on MHC class II.
Immunity, 14, 2001
7BV6
DownloadVisualize
BU of 7bv6 by Molmil
Crystal structure of the autophagic STX17/SNAP29/VAMP8 SNARE complex
分子名称: Synaptosomal-associated protein 29, Syntaxin-17, Vesicle-associated membrane protein 8
著者Li, Y, Pan, L.F.
登録日2020-04-09
公開日2020-09-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Decoding three distinct states of the Syntaxin17 SNARE motif in mediating autophagosome-lysosome fusion.
Proc.Natl.Acad.Sci.USA, 117, 2020
7BV4
DownloadVisualize
BU of 7bv4 by Molmil
Crystal structure of STX17 LIR region in complex with GABARAP
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Gamma-aminobutyric acid receptor-associated protein, ...
著者Li, Y, Pan, L.F.
登録日2020-04-09
公開日2020-09-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Decoding three distinct states of the Syntaxin17 SNARE motif in mediating autophagosome-lysosome fusion.
Proc.Natl.Acad.Sci.USA, 117, 2020
6KXS
DownloadVisualize
BU of 6kxs by Molmil
Cryo-EM structure of human IgM-Fc in complex with the J chain and the ectodomain of pIgR
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Immunoglobulin J chain, ...
著者Li, Y, Wang, G, Xiao, J.
登録日2019-09-12
公開日2020-02-05
最終更新日2021-12-15
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural insights into immunoglobulin M.
Science, 367, 2020
5F59
DownloadVisualize
BU of 5f59 by Molmil
The crystal structure of MLL3 SET domain
分子名称: Histone-lysine N-methyltransferase 2C, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION
著者Li, Y, Lei, M, Chen, Y.
登録日2015-12-04
公開日2016-02-24
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.801 Å)
主引用文献Structural basis for activity regulation of MLL family methyltransferases.
Nature, 530, 2016
5F6L
DownloadVisualize
BU of 5f6l by Molmil
The crystal structure of MLL1 (N3861I/Q3867L) in complex with RbBP5 and Ash2L
分子名称: Histone-lysine N-methyltransferase 2A, Retinoblastoma-binding protein 5, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Li, Y, Lei, M, Chen, Y.
登録日2015-12-06
公開日2016-02-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for activity regulation of MLL family methyltransferases.
Nature, 530, 2016
5F5E
DownloadVisualize
BU of 5f5e by Molmil
The Crystal Structure of MLL1 SET domain with N3816I/Q3867L mutation
分子名称: Histone-lysine N-methyltransferase 2A, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION
著者Li, Y, Lei, M, Chen, Y.
登録日2015-12-04
公開日2016-02-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.802 Å)
主引用文献Structural basis for activity regulation of MLL family methyltransferases.
Nature, 530, 2016
5F6K
DownloadVisualize
BU of 5f6k by Molmil
Crystal structure of the MLL3-Ash2L-RbBP5 complex
分子名称: Histone-lysine N-methyltransferase 2C, Retinoblastoma-binding protein 5, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Li, Y, Lei, M, Chen, Y.
登録日2015-12-06
公開日2016-02-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.411 Å)
主引用文献Structural basis for activity regulation of MLL family methyltransferases.
Nature, 530, 2016
5KTQ
DownloadVisualize
BU of 5ktq by Molmil
LARGE FRAGMENT OF TAQ DNA POLYMERASE BOUND TO DCTP
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, PROTEIN (DNA POLYMERASE I)
著者Li, Y, Kong, Y, Korolev, S, Waksman, G.
登録日1998-09-22
公開日1998-09-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of the Klenow fragment of Thermus aquaticus DNA polymerase I complexed with deoxyribonucleoside triphosphates.
Protein Sci., 7, 1998
7BRE
DownloadVisualize
BU of 7bre by Molmil
The crystal structure of MLL2 in complex with ASH2L and RBBP5
分子名称: Histone-lysine N-methyltransferase 2B, Retinoblastoma-binding protein 5, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Li, Y, Zhao, L, Chen, Y.
登録日2020-03-28
公開日2020-07-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.803 Å)
主引用文献Crystal Structure of MLL2 Complex Guides the Identification of a Methylation Site on P53 Catalyzed by KMT2 Family Methyltransferases.
Structure, 28, 2020
7SOY
DownloadVisualize
BU of 7soy by Molmil
The structure of the PP2A-B56gamma1 holoenzyme-PME-1 complex
分子名称: Isoform Gamma-1 of Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform, Protein phosphatase methylesterase 1, Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform, ...
著者Li, Y, Balakrishnan, V.K, Rowse, M, Novikova, I.V, Xing, Y.
登録日2021-11-01
公開日2022-08-31
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Coupling to short linear motifs creates versatile PME-1 activities in PP2A holoenzyme demethylation and inhibition.
Elife, 11, 2022

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon