Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7Y8V
DownloadVisualize
BU of 7y8v by Molmil
Crystal structure of AlbEF homolog mutant (AlbF-H54A/H58A) from Quasibacillus thermotolerans
分子名称: 1,2-ETHANEDIOL, AlbE homolog, AlbF homolog H54A/H58A mutant, ...
著者Ishida, K, Nakamura, A, Kojima, S.
登録日2022-06-24
公開日2022-10-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the AlbEF complex involved in subtilosin A biosynthesis.
Structure, 30, 2022
7Y8U
DownloadVisualize
BU of 7y8u by Molmil
Crystal structure of AlbEF homolog from Quasibacillus thermotolerans
分子名称: 1,2-ETHANEDIOL, AlbE homolog, AlbF homolog, ...
著者Ishida, K, Nakamura, A, Kojima, S.
登録日2022-06-24
公開日2022-10-12
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the AlbEF complex involved in subtilosin A biosynthesis.
Structure, 30, 2022
7Y8X
DownloadVisualize
BU of 7y8x by Molmil
Crystal structure of AlbEF homolog from Quasibacillus thermotolerans in complex with Ni(II)
分子名称: 1,2-ETHANEDIOL, AlbE homolog, AlbF homolog, ...
著者Ishida, K, Nakamura, A, Kojima, S.
登録日2022-06-24
公開日2022-10-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structure of the AlbEF complex involved in subtilosin A biosynthesis.
Structure, 30, 2022
7PCE
DownloadVisualize
BU of 7pce by Molmil
BurG (apo): Biosynthesis of cyclopropanol rings in bacterial toxins
分子名称: ADENOSINE-5'-DIPHOSPHATE, Ketol-acid reductoisomerase, PHOSPHATE ION
著者Trottmann, F, Ishida, K, Ishida, M, Kries, H, Groll, M, Hertweck, C.
登録日2021-08-03
公開日2022-08-10
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Pathogenic bacteria remodel central metabolic enzyme to build a cyclopropanol warhead.
Nat.Chem., 14, 2022
7PCO
DownloadVisualize
BU of 7pco by Molmil
BurG E232Q mutant (holo) in complex with 2R,3R-2,3-dihydroxy-6-methyl-heptanoate (12): Biosynthesis of cyclopropanol rings in bacterial toxins
分子名称: (2R,3R)-6-methyl-2,3-bis(oxidanyl)heptanoic acid, GLYCEROL, Ketol-acid reductoisomerase, ...
著者Trottmann, F, Ishida, K, Ishida, M, Kries, H, Groll, M, Hertweck, C.
登録日2021-08-03
公開日2022-08-10
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Pathogenic bacteria remodel central metabolic enzyme to build a cyclopropanol warhead.
Nat.Chem., 14, 2022
7PCT
DownloadVisualize
BU of 7pct by Molmil
BurG E232Q mutant (holo) in complex with enol-oxalacetate (15): Biosynthesis of cyclopropanol rings in bacterial toxins
分子名称: (~{Z})-2-oxidanylbut-2-enedioic acid, GLYCEROL, Ketol-acid reductoisomerase, ...
著者Trottmann, F, Ishida, K, Ishida, M, Kries, H, Groll, M, Hertweck, C.
登録日2021-08-04
公開日2022-08-10
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Pathogenic bacteria remodel central metabolic enzyme to build a cyclopropanol warhead.
Nat.Chem., 14, 2022
7PCC
DownloadVisualize
BU of 7pcc by Molmil
BurG in complex with Mg2+ and NAD+ (holo): Biosynthesis of cyclopropanol rings in bacterial toxins
分子名称: GLYCEROL, Ketol-acid reductoisomerase, MAGNESIUM ION, ...
著者Trottmann, F, Ishida, K, Ishida, M, Kries, H, Groll, M, Hertweck, C.
登録日2021-08-03
公開日2022-08-10
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Pathogenic bacteria remodel central metabolic enzyme to build a cyclopropanol warhead.
Nat.Chem., 14, 2022
7PCM
DownloadVisualize
BU of 7pcm by Molmil
BurG (holo) in complex with (Z)-2,3-dihydroxy-6-methyl-hept-2-enoate (13): Biosynthesis of cyclopropanol rings in bacterial toxins
分子名称: (Z)-6-methyl-2,3-bis(oxidanyl)hept-2-enoic acid, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Ketol-acid reductoisomerase, ...
著者Trottmann, F, Ishida, K, Ishida, M, Kries, H, Groll, M, Hertweck, C.
登録日2021-08-03
公開日2022-08-10
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Pathogenic bacteria remodel central metabolic enzyme to build a cyclopropanol warhead.
Nat.Chem., 14, 2022
7PCG
DownloadVisualize
BU of 7pcg by Molmil
BurG (holo) in complex with cyclopropane-1,1-dicarboxylate (7): Biosynthesis of cyclopropanol rings in bacterial toxins
分子名称: GLYCEROL, Ketol-acid reductoisomerase, MAGNESIUM ION, ...
著者Trottmann, F, Ishida, K, Ishida, M, Kries, H, Groll, M, Hertweck, C.
登録日2021-08-03
公開日2022-08-10
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Pathogenic bacteria remodel central metabolic enzyme to build a cyclopropanol warhead.
Nat.Chem., 14, 2022
7PCN
DownloadVisualize
BU of 7pcn by Molmil
BurG (holo) in complex with gonyenediol (14), trigonic acid (6) and DMS: Biosynthesis of cyclopropanol rings in bacterial toxins
分子名称: (2R)-2-oxidanyl-2-(1-oxidanylcyclopropyl)ethanoic acid, (METHYLSULFANYL)METHANE, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, ...
著者Trottmann, F, Ishida, K, Ishida, M, Kries, H, Groll, M, Hertweck, C.
登録日2021-08-03
公開日2022-08-10
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Pathogenic bacteria remodel central metabolic enzyme to build a cyclopropanol warhead.
Nat.Chem., 14, 2022
7PCI
DownloadVisualize
BU of 7pci by Molmil
BurG (holo) in complex with hydroxypyruvate-enol (8): Biosynthesis of cyclopropanol rings in bacterial toxins
分子名称: (Z)-2,3-bis(oxidanyl)prop-2-enoic acid, IMIDAZOLE, Ketol-acid reductoisomerase, ...
著者Trottmann, F, Ishida, K, Ishida, M, Kries, H, Groll, M, Hertweck, C.
登録日2021-08-03
公開日2022-08-10
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Pathogenic bacteria remodel central metabolic enzyme to build a cyclopropanol warhead.
Nat.Chem., 14, 2022
7PCL
DownloadVisualize
BU of 7pcl by Molmil
BurG (holo) in complex with 2-hydroxy-2-(hydroxy(isopropyl)amino)acetate (11): Biosynthesis of cyclopropanolrings in bacterial toxins
分子名称: (2S)-2-oxidanyl-2-[oxidanyl(propan-2-yl)amino]ethanoic acid, Ketol-acid reductoisomerase, MAGNESIUM ION, ...
著者Trottmann, F, Ishida, K, Ishida, M, Kries, H, Groll, M, Hertweck, C.
登録日2021-08-03
公開日2022-08-10
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Pathogenic bacteria remodel central metabolic enzyme to build a cyclopropanol warhead.
Nat.Chem., 14, 2022
3O15
DownloadVisualize
BU of 3o15 by Molmil
Crystal Structure of Bacillus subtilis Thiamin Phosphate Synthase Complexed with a Carboxylated Thiazole Phosphate
分子名称: 2-TRIFLUOROMETHYL-5-METHYLENE-5H-PYRIMIDIN-4-YLIDENEAMINE, 4-methyl-5-[2-(phosphonooxy)ethyl]-1,3-thiazole-2-carboxylic acid, PYROPHOSPHATE 2-, ...
著者McCulloch, K.M, Hanes, J.W, Abdelwahed, S, Mahanta, N, Hazra, A, Ishida, K, Begley, T.P, Ealick, S.E.
登録日2010-07-20
公開日2011-07-27
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal Structure and Kinetic Characterization of Bacillus subtilis Thiamin Phosphate Synthase with a Carboxylated Thiazole Phosphate
to be published
3O16
DownloadVisualize
BU of 3o16 by Molmil
Crystal Structure of Bacillus subtilis Thiamin Phosphate Synthase K159A
分子名称: Thiamine-phosphate pyrophosphorylase
著者McCulloch, K.M, Hanes, J.W, Abdelwahed, S, Mahanta, N, Hazra, A, Ishida, K, Begley, T.P, Ealick, S.E.
登録日2010-07-20
公開日2011-07-27
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure and Kinetic Characterization of Bacillus subtilis Thiamin Phosphate Synthase with a Carboxylated Thiazole Phosphate
to be published
3O63
DownloadVisualize
BU of 3o63 by Molmil
Crystal Structure of Thiamin Phosphate Synthase from Mycobacterium tuberculosis
分子名称: PHOSPHATE ION, Probable thiamine-phosphate pyrophosphorylase
著者McCulloch, K.M, Ramamoorthy, D, Ishida, K, Guida, W.C, Begley, T.P, Ealick, S.E.
登録日2010-07-28
公開日2011-07-27
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal Structure and Identification of Potential Inhibitor Compounds for Mycobacterium tuberculosis Thiamin Phosphate Synthase
to be published
7DU8
DownloadVisualize
BU of 7du8 by Molmil
Crystal structure of human Proto-oncogene tyrosine-protein kinase receptor Ret in complex with Selpercatinib
分子名称: Proto-oncogene tyrosine-protein kinase receptor Ret, Selpercatinib
著者Miyazaki, I, Ishida, K, Suzuki, T.
登録日2021-01-08
公開日2022-02-02
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Selective RET inhibitor TAS0953/HM06
To be published
7DUA
DownloadVisualize
BU of 7dua by Molmil
Crystal structure of human Proto-oncogene tyrosine-protein kinase receptor Ret in complex with 4-amino-7-(1-methylcyclopropyl)-N-(5-methyl-1H-pyrazol-3-yl)pyrrolo[2,3-d]pyrimidine-5-carboxamide
分子名称: 4-azanyl-7-(1-methylcyclopropyl)-~{N}-(5-methyl-1~{H}-pyrazol-3-yl)pyrrolo[2,3-d]pyrimidine-5-carboxamide, Proto-oncogene tyrosine-protein kinase receptor Ret
著者Miyazaki, I, Ishida, K, Suzuki, T.
登録日2021-01-08
公開日2022-01-12
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Selective RET inhibitor TAS0953/HM06
To be published
7DU9
DownloadVisualize
BU of 7du9 by Molmil
Crystal structure of human Proto-oncogene tyrosine-protein kinase receptor Ret in complex with Pralsetinib
分子名称: Pralsetinib, Proto-oncogene tyrosine-protein kinase receptor Ret
著者Miyazaki, I, Ishida, K, Suzuki, T.
登録日2021-01-08
公開日2022-01-12
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Selective RET inhibitor TAS0953/HM06
To be published
4KTS
DownloadVisualize
BU of 4kts by Molmil
Bovine trypsin in complex with microviridin J at pH 8.5
分子名称: CALCIUM ION, Cationic trypsin, DI(HYDROXYETHYL)ETHER, ...
著者Quitterer, F, Groll, M, Hertweck, C, Dittmann, E.
登録日2013-05-21
公開日2014-04-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Harnessing the evolvability of tricyclic microviridins to dissect protease-inhibitor interactions.
Angew.Chem.Int.Ed.Engl., 53, 2014
4KTU
DownloadVisualize
BU of 4ktu by Molmil
Bovine trypsin in complex with microviridin J at pH 6.5
分子名称: CALCIUM ION, Cationic trypsin, microviridin j
著者Quitterer, F, Groll, M, Hertweck, C, Dittmann, E.
登録日2013-05-21
公開日2014-04-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Harnessing the evolvability of tricyclic microviridins to dissect protease-inhibitor interactions.
Angew.Chem.Int.Ed.Engl., 53, 2014
8CRH
DownloadVisualize
BU of 8crh by Molmil
Crystal structure of Candida auris dihydrofolate reductase complexed with NADPH and cycloguanil
分子名称: 5-(4-chlorophenyl)-6,6-dimethyl-1,4-dihydro-1,3,5-triazine-2,4-diamine, Dihydrofolate reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Kirkman, T.J, Dias, M.V.B.
登録日2023-03-08
公開日2023-08-02
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal structure of dihydrofolate reductase from the emerging pathogenic fungus Candida auris.
Acta Crystallogr D Struct Biol, 79, 2023
1AQ7
DownloadVisualize
BU of 1aq7 by Molmil
TRYPSIN WITH INHIBITOR AERUGINOSIN 98-B
分子名称: AERUGINOSIN 98-B, TRYPSIN
著者Sandler, B, Murakami, M, Clardy, J.
登録日1997-08-07
公開日1998-02-25
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Atomic Structure of the Trypsin-Aeruginosin 98-B Complex
J.Am.Chem.Soc., 120, 1998
7ZZX
DownloadVisualize
BU of 7zzx by Molmil
Crystal structure of Candida auris DHFR in apo form
分子名称: Dihydrofolate reductase
著者Kirkman, T.J, Dias, M.V.B.
登録日2022-05-26
公開日2023-06-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of dihydrofolate reductase from the emerging pathogenic fungus Candida auris.
Acta Crystallogr D Struct Biol, 79, 2023
7DZY
DownloadVisualize
BU of 7dzy by Molmil
Spike protein from SARS-CoV2 with Fab fragment of enhancing antibody 2490
分子名称: Fab Heavy chain of enhancing antibody 2490, Fab light chain of enhancing antibody 2490, Spike glycoprotein
著者Liu, Y, Soh, W.T, Li, S, Kishikawa, J, Hirose, M, Kato, T, Standley, D, Okada, M, Arase, H.
登録日2021-01-26
公開日2021-06-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献An infectivity-enhancing site on the SARS-CoV-2 spike protein targeted by antibodies.
Cell, 184, 2021
7DZX
DownloadVisualize
BU of 7dzx by Molmil
Spike protein from SARS-CoV2 with Fab fragment of enhancing antibody 8D2
分子名称: Fab Heavy chain of enhancing antibody, Fab light chain of enhancing antibody, Spike glycoprotein
著者Liu, Y, Soh, W.T, Li, S, Kishikawa, J, Hirose, M, Kato, T, Standley, D, Okada, M, Arase, H.
登録日2021-01-26
公開日2021-06-02
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.53 Å)
主引用文献An infectivity-enhancing site on the SARS-CoV-2 spike protein targeted by antibodies.
Cell, 184, 2021

 

12>

222036

件を2024-07-03に公開中

PDB statisticsPDBj update infoContact PDBjnumon