4YHZ
| Crystal structure of 304M3-B Fab in complex with H3K4me3 peptide | 分子名称: | Fab Heavy Chain, Fab Light Chain, GLYCEROL, ... | 著者 | Hattori, T, Dementieva, I.S, Montano, S.P, Koide, S. | 登録日 | 2015-02-27 | 公開日 | 2016-02-10 | 最終更新日 | 2023-09-27 | 実験手法 | X-RAY DIFFRACTION (2.304 Å) | 主引用文献 | Antigen clasping by two antigen-binding sites of an exceptionally specific antibody for histone methylation. Proc.Natl.Acad.Sci.USA, 113, 2016
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4YHY
| Crystal structure of 309M3-B in complex with trimethylated Lys | 分子名称: | Fab Heavy Chain, Fab Light Chain, N-TRIMETHYLLYSINE | 著者 | Hattori, T, Dementieva, I.S, Montano, S.P, Koide, S. | 登録日 | 2015-02-27 | 公開日 | 2016-02-10 | 最終更新日 | 2023-09-27 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Antigen clasping by two antigen-binding sites of an exceptionally specific antibody for histone methylation. Proc.Natl.Acad.Sci.USA, 113, 2016
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4YHP
| Crystal structure of 309M3-B Fab in complex with H3K9me3 peptide | 分子名称: | Fab Heavy Chain, Fab Light Chain, H3K9me3 peptide | 著者 | Hattori, T, Dementieva, I.S, Montano, S.P, Koide, S. | 登録日 | 2015-02-27 | 公開日 | 2016-02-10 | 最終更新日 | 2023-09-27 | 実験手法 | X-RAY DIFFRACTION (2.53 Å) | 主引用文献 | Antigen clasping by two antigen-binding sites of an exceptionally specific antibody for histone methylation. Proc.Natl.Acad.Sci.USA, 113, 2016
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8EZG
| Monobody 12D1 bound to KRAS(G12D) | 分子名称: | GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... | 著者 | Hattori, T, Glasser, E, Akkapeddi, P, Ketavarapu, G, Teng, K.W, Koide, A, Koide, S. | 登録日 | 2022-10-31 | 公開日 | 2023-07-19 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.52 Å) | 主引用文献 | Exploring switch II pocket conformation of KRAS(G12D) with mutant-selective monobody inhibitors. Proc.Natl.Acad.Sci.USA, 120, 2023
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8F0M
| Monobody 12D5 bound to KRAS(G12D) | 分子名称: | 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE, Isoform 2B of GTPase KRas, ... | 著者 | Hattori, T, Glasser, E, Akkapeddi, P, Ketavarapu, G, Teng, K.W, Koide, A, Koide, S. | 登録日 | 2022-11-03 | 公開日 | 2023-07-19 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.44 Å) | 主引用文献 | Exploring switch II pocket conformation of KRAS(G12D) with mutant-selective monobody inhibitors. Proc.Natl.Acad.Sci.USA, 120, 2023
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7L0F
| Monobody 12VC3 Bound to HRAS(WT) | 分子名称: | 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, GTPase HRas, MAGNESIUM ION, ... | 著者 | Teng, K.W, Hattori, T, Tsai, S, Koide, S. | 登録日 | 2020-12-11 | 公開日 | 2021-03-24 | 最終更新日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (1.98 Å) | 主引用文献 | Selective and noncovalent targeting of RAS mutants for inhibition and degradation. Nat Commun, 12, 2021
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7L0G
| Monobody 12VC1 Bound to HRAS(G12C) | 分子名称: | 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, GTPase HRas, MAGNESIUM ION, ... | 著者 | Teng, K.W, Hattori, T, Tsai, S, Koide, S. | 登録日 | 2020-12-11 | 公開日 | 2021-03-24 | 最終更新日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (2.54 Å) | 主引用文献 | Selective and noncovalent targeting of RAS mutants for inhibition and degradation. Nat Commun, 12, 2021
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7SFX
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6KR0
| Crystal structure of HL homo-diabody | 分子名称: | HL diabody | 著者 | Tanaka, Y. | 登録日 | 2019-08-20 | 公開日 | 2020-08-26 | 最終更新日 | 2021-09-08 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Association behavior and control of the quality of cancer therapeutic bispecific diabodies expressed in Escherichia coli Biochem Eng J, 160, 2020
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8VQD
| HER2 S310F in complex with TL1 Fab | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Receptor tyrosine-protein kinase erbB-2/hIgG1 Fc domain fusion, Variable Heavy chain of TL1 Fab, ... | 著者 | Bang, I, Koide, S. | 登録日 | 2024-01-18 | 公開日 | 2024-10-09 | 実験手法 | ELECTRON MICROSCOPY (2.61 Å) | 主引用文献 | Selective targeting of oncogenic hotspot mutations of the HER2 extracellular domain To Be Published
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1EHL
| 64M-2 ANTIBODY FAB COMPLEXED WITH D(5HT)(6-4)T | 分子名称: | 5'-(D(5HT)P*(6-4)T)-3', ANTI-(6-4) PHOTOPRODUCT ANTIBODY 64M-2 FAB (HEAVY CHAIN), ANTI-(6-4) PHOTOPRODUCT ANTIBODY 64M-2 FAB (LIGHT CHAIN) | 著者 | Yokoyama, H, Mizutani, R, Satow, Y, Komatsu, Y, Ohtsuka, E, Nikaido, O. | 登録日 | 2000-02-21 | 公開日 | 2001-02-21 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Crystal structure of the 64M-2 antibody Fab fragment in complex with a DNA dT(6-4)T photoproduct formed by ultraviolet radiation. J.Mol.Biol., 299, 2000
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1KEG
| Antibody 64M-2 Fab complexed with dTT(6-4)TT | 分子名称: | 5'-D(*TP*(64T)P*TP*T)-3', Anti-(6-4) photoproduct antibody 64M-2 Fab (heavy chain), Anti-(6-4) photoproduct antibody 64M-2 Fab (light chain), ... | 著者 | Yokoyama, H, Mizutani, R, Satow, Y, Sato, K, Komatsu, Y, Ohtsuka, E, Nikaido, O. | 登録日 | 2001-11-15 | 公開日 | 2002-11-15 | 最終更新日 | 2023-08-16 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Structure of the DNA (6-4) photoproduct dTT(6-4)TT in complex with the 64M-2 antibody Fab fragment implies increased antibody-binding affinity by the flanking nucleotides. Acta Crystallogr.,Sect.D, 68, 2012
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8VRA
| Structure of a synthetic antibody in complex with a class I MHC presenting a hapten-peptide conjugate | 分子名称: | AMG 510 (bound form), Beta-2-microglobulin, GTPase KRas, ... | 著者 | Maso, L, Bang, I, Koide, S. | 登録日 | 2024-01-20 | 公開日 | 2024-09-04 | 実験手法 | ELECTRON MICROSCOPY (3.12 Å) | 主引用文献 | Molecular basis for antibody recognition of multiple drug-peptide/MHC complexes. Proc.Natl.Acad.Sci.USA, 121, 2024
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8VRB
| Structure of a synthetic antibody in complex with a class I MHC presenting a hapten-peptide conjugate | 分子名称: | AMG 510 (bound form), Beta-2-microglobulin, GTPase KRas, ... | 著者 | Maso, L, Bang, I, Koide, S. | 登録日 | 2024-01-20 | 公開日 | 2024-09-04 | 実験手法 | ELECTRON MICROSCOPY (3.25 Å) | 主引用文献 | Molecular basis for antibody recognition of multiple drug-peptide/MHC complexes. Proc.Natl.Acad.Sci.USA, 121, 2024
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8VR9
| Structure of a synthetic antibody in complex with a class I MHC presenting a hapten-peptide conjugate | 分子名称: | AMG 510 (bound form), Beta-2-microglobulin, GTPase KRas, ... | 著者 | Maso, L, Bang, I, Koide, S. | 登録日 | 2024-01-20 | 公開日 | 2024-09-04 | 最終更新日 | 2024-10-09 | 実験手法 | ELECTRON MICROSCOPY (3.06 Å) | 主引用文献 | Molecular basis for antibody recognition of multiple drug-peptide/MHC complexes. Proc.Natl.Acad.Sci.USA, 121, 2024
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