Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1IQ6
DownloadVisualize
BU of 1iq6 by Molmil
(R)-HYDRATASE FROM A. CAVIAE INVOLVED IN PHA BIOSYNTHESIS
分子名称: (R)-SPECIFIC ENOYL-COA HYDRATASE, ISOPROPYL ALCOHOL
著者Hisano, T, Tsuge, T, Fukui, T, Iwata, T, Doi, Y.
登録日2001-06-18
公開日2003-02-18
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of the (R)-specific enoyl-CoA hydratase from Aeromonas caviae involved in polyhydroxyalkanoate biosynthesis
J.Biol.Chem., 278, 2003
6LC9
DownloadVisualize
BU of 6lc9 by Molmil
Crystal structure of AmpC Ent385 complex form with ceftazidime
分子名称: 1,4-DIETHYLENE DIOXIDE, ACYLATED CEFTAZIDIME, Beta-lactamase, ...
著者Kawai, A, Doi, Y.
登録日2019-11-18
公開日2020-04-22
最終更新日2022-03-23
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural Basis of Reduced Susceptibility to Ceftazidime-Avibactam and Cefiderocol inEnterobacter cloacaeDue to AmpC R2 Loop Deletion.
Antimicrob.Agents Chemother., 64, 2020
6LC7
DownloadVisualize
BU of 6lc7 by Molmil
Crystal structure of AmpC Ent385 free form
分子名称: 1,4-DIETHYLENE DIOXIDE, Beta-lactamase, GLYCEROL, ...
著者Kawai, A, Doi, Y.
登録日2019-11-18
公開日2020-04-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural Basis of Reduced Susceptibility to Ceftazidime-Avibactam and Cefiderocol inEnterobacter cloacaeDue to AmpC R2 Loop Deletion.
Antimicrob.Agents Chemother., 64, 2020
1VMO
DownloadVisualize
BU of 1vmo by Molmil
CRYSTAL STRUCTURE OF VITELLINE MEMBRANE OUTER LAYER PROTEIN I (VMO-I): A FOLDING MOTIF WITH HOMOLOGOUS GREEK KEY STRUCTURES RELATED BY AN INTERNAL THREE-FOLD SYMMETRY
分子名称: VITELLINE MEMBRANE OUTER LAYER PROTEIN I
著者Shimizu, T, Vassylyev, D.G, Kido, S, Doi, Y, Morikawa, K.
登録日1994-01-06
公開日1994-05-31
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of vitelline membrane outer layer protein I (VMO-I): a folding motif with homologous Greek key structures related by an internal three-fold symmetry.
EMBO J., 13, 1994
8JB7
DownloadVisualize
BU of 8jb7 by Molmil
Crystal structure of CMY-185
分子名称: Beta-lactamase, SULFATE ION
著者Kawai, A, Doi, Y.
登録日2023-05-08
公開日2023-12-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structural insights into the molecular mechanism of high-level ceftazidime-avibactam resistance conferred by CMY-185.
Mbio, 15, 2024
8JB8
DownloadVisualize
BU of 8jb8 by Molmil
Crystal structure of CMY-185 complex with ceftazidime
分子名称: ACYLATED CEFTAZIDIME, Beta-lactamase
著者Kawai, A, Doi, Y.
登録日2023-05-08
公開日2023-12-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural insights into the molecular mechanism of high-level ceftazidime-avibactam resistance conferred by CMY-185.
Mbio, 15, 2024
6LC8
DownloadVisualize
BU of 6lc8 by Molmil
Crystal structure of AmpC Ent385 complex form with avibactam
分子名称: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, 1,4-DIETHYLENE DIOXIDE, Beta-lactamase, ...
著者Kawai, A, Doi, Y.
登録日2019-11-18
公開日2020-04-22
最終更新日2022-03-23
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural Basis of Reduced Susceptibility to Ceftazidime-Avibactam and Cefiderocol inEnterobacter cloacaeDue to AmpC R2 Loop Deletion.
Antimicrob.Agents Chemother., 64, 2020
7EHF
DownloadVisualize
BU of 7ehf by Molmil
Crystal structure of the aminoglycoside resistance methyltransferase NpmB1
分子名称: 1,2-ETHANEDIOL, 16S rRNA methyltransferase, CHLORIDE ION, ...
著者Kawai, A, Doi, Y.
登録日2021-03-29
公開日2021-08-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Functional and Structural Characterization of Acquired 16S rRNA Methyltransferase NpmB1 Conferring Pan-Aminoglycoside Resistance.
Antimicrob.Agents Chemother., 65, 2021
5WEP
DownloadVisualize
BU of 5wep by Molmil
Crystal structure of fosfomycin resistance protein FosA3 with inhibitor (ANY1) bound
分子名称: 6,6'-(4-nitro-1H-pyrazole-3,5-diyl)bis(3-bromopyrazolo[1,5-a]pyrimidin-2(1H)-one), FosA3, ZINC ION
著者Klontz, E.H, Sundberg, E.J.
登録日2017-07-10
公開日2018-07-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.502 Å)
主引用文献Small-Molecule Inhibitor of FosA Expands Fosfomycin Activity to Multidrug-Resistant Gram-Negative Pathogens.
Antimicrob. Agents Chemother., 63, 2019
5WEW
DownloadVisualize
BU of 5wew by Molmil
Crystal structure of Klebsiella pneumoniae fosfomycin resistance protein (FosAKP) with inhibitor (ANY1) bound
分子名称: 6,6'-(4-nitro-1H-pyrazole-3,5-diyl)bis(3-bromopyrazolo[1,5-a]pyrimidin-2(1H)-one), Fosfomycin resistance protein, MANGANESE (II) ION
著者Klontz, E.H, Sundberg, E.J.
登録日2017-07-10
公開日2018-07-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.178 Å)
主引用文献Small-Molecule Inhibitor of FosA Expands Fosfomycin Activity to Multidrug-Resistant Gram-Negative Pathogens.
Antimicrob. Agents Chemother., 63, 2019
8YXB
DownloadVisualize
BU of 8yxb by Molmil
Crystal structure of the HSA complex with ceftriaxone and myristate
分子名称: Ceftriaxone, MYRISTIC ACID, Serum albumin
著者Kawai, A.
登録日2024-04-02
公開日2024-08-07
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Interaction of Cephalosporins with Human Serum Albumin: A Structural Study.
J.Med.Chem., 67, 2024
8YXA
DownloadVisualize
BU of 8yxa by Molmil
Crystal structure of the HSA complex with cefazolin and myristate
分子名称: (6~{R},7~{R})-3-[(5-methyl-1,3,4-thiadiazol-2-yl)sulfanylmethyl]-8-oxidanylidene-7-[2-(1,2,3,4-tetrazol-1-yl)ethanoylamino]-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid, MYRISTIC ACID, Serum albumin
著者Kawai, A.
登録日2024-04-02
公開日2024-08-07
最終更新日2024-09-04
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Interaction of Cephalosporins with Human Serum Albumin: A Structural Study.
J.Med.Chem., 67, 2024
2ZJ9
DownloadVisualize
BU of 2zj9 by Molmil
X-ray crystal structure of AmpC beta-Lactamase (AmpC(D)) from an Escherichia coli with a Tripeptide Deletion (Gly286 Ser287 Asp288) on the H10 Helix
分子名称: AmpC, ISOPROPYL ALCOHOL, SODIUM ION
著者Yamaguchi, Y, Sato, G, Yamagata, Y, Wachino, J, Arakawa, Y, Kurosaki, H.
登録日2008-02-29
公開日2009-03-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of AmpC beta-lactamase (AmpCD) from an Escherichia coli clinical isolate with a tripeptide deletion (Gly286-Ser287-Asp288) in the H10 helix
Acta Crystallogr.,Sect.F, 65, 2009
8JQO
DownloadVisualize
BU of 8jqo by Molmil
Protocatecuate hydroxylase from Xylophilus ampelinus complexed with imidazole
分子名称: 4-hydroxybenzoate 3-monooxygenase (NAD(P)H), CALCIUM ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Fukushima, R, Katsuki, N, Fushinobu, S, Takaya, N.
登録日2023-06-14
公開日2023-12-06
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Protocatechuate hydroxylase is a novel group A flavoprotein monooxygenase with a unique substrate recognition mechanism.
J.Biol.Chem., 300, 2023
8JRD
DownloadVisualize
BU of 8jrd by Molmil
Chalcone synthase from Glycine max (L.) Merr (soybean) complexed with naringenin and coenzyme A
分子名称: 1,2-ETHANEDIOL, COENZYME A, DI(HYDROXYETHYL)ETHER, ...
著者Waki, T, Imaizumi, R, Nakata, S, Yanai, T, Takeshita, K, Sakai, N, Kataoka, K, Yamamoto, M, Nakayama, T, Yamashita, S.
登録日2023-06-16
公開日2024-06-19
最終更新日2024-07-17
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Structural insights into catalytic promiscuity of chalcone synthase from Glycine max (L.) Merr.: Coenzyme A-induced alteration of product specificity.
Biochem.Biophys.Res.Commun., 718, 2024
8JQQ
DownloadVisualize
BU of 8jqq by Molmil
Protocatecuate hydroxylase from Xylophilus ampelinus C347T mutant
分子名称: 4-hydroxybenzoate 3-monooxygenase (NAD(P)H), CALCIUM ION, FLAVIN-ADENINE DINUCLEOTIDE
著者Fukushima, R, Katsuki, N, Fushinobu, S, Takaya, N.
登録日2023-06-14
公開日2023-12-06
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Protocatechuate hydroxylase is a novel group A flavoprotein monooxygenase with a unique substrate recognition mechanism.
J.Biol.Chem., 300, 2023
8JQP
DownloadVisualize
BU of 8jqp by Molmil
Protocatecuate hydroxylase from Xylophilus ampelinus complexed with 3,4-dihydroxybenzoate
分子名称: 3,4-DIHYDROXYBENZOIC ACID, 4-hydroxybenzoate 3-monooxygenase (NAD(P)H), CALCIUM ION, ...
著者Fukushima, R, Katsuki, N, Fushinobu, S, Takaya, N.
登録日2023-06-14
公開日2023-12-06
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Protocatechuate hydroxylase is a novel group A flavoprotein monooxygenase with a unique substrate recognition mechanism.
J.Biol.Chem., 300, 2023
5V91
DownloadVisualize
BU of 5v91 by Molmil
Crystal structure of fosfomycin resistance protein from Klebsiella pneumoniae
分子名称: Fosfomycin resistance protein, ZINC ION
著者Klontz, E, Guenther, S, Silverstein, Z, Sundberg, E.
登録日2017-03-22
公開日2017-08-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structure and Dynamics of FosA-Mediated Fosfomycin Resistance in Klebsiella pneumoniae and Escherichia coli.
Antimicrob. Agents Chemother., 61, 2017
5V3D
DownloadVisualize
BU of 5v3d by Molmil
Crystal structure of fosfomycin resistance protein from Klebsiella pneumoniae with bound fosfomycin
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, FOSFOMYCIN, ...
著者Klontz, E, Guenther, S, Silverstein, Z, Sundberg, E.
登録日2017-03-07
公開日2017-08-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.539 Å)
主引用文献Structure and Dynamics of FosA-Mediated Fosfomycin Resistance in Klebsiella pneumoniae and Escherichia coli.
Antimicrob. Agents Chemother., 61, 2017
5VB0
DownloadVisualize
BU of 5vb0 by Molmil
Crystal structure of fosfomycin resistance protein FosA3
分子名称: Fosfomycin resistance protein FosA3, MANGANESE (II) ION, NICKEL (II) ION
著者Klontz, E, Guenther, S, Silverstein, Z, Sundberg, E.
登録日2017-03-28
公開日2017-08-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.689 Å)
主引用文献Structure and Dynamics of FosA-Mediated Fosfomycin Resistance in Klebsiella pneumoniae and Escherichia coli.
Antimicrob. Agents Chemother., 61, 2017
6C3U
DownloadVisualize
BU of 6c3u by Molmil
Crystal structure of Klebsiella pneumoniae fosfomycin resistance protein (FosAKP) with inhibitor (ANY2) bound
分子名称: 3-bromo-6-(4-nitro-1H-pyrazol-3-yl)pyrazolo[1,5-a]pyrimidin-2(1H)-one, FosA family fosfomycin resistance glutathione transferase, GLYCEROL, ...
著者Klontz, E.H, Sundberg, E.J.
登録日2018-01-10
公開日2018-12-26
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Small-Molecule Inhibitor of FosA Expands Fosfomycin Activity to Multidrug-Resistant Gram-Negative Pathogens.
Antimicrob. Agents Chemother., 63, 2019
2D81
DownloadVisualize
BU of 2d81 by Molmil
PHB depolymerase (S39A) complexed with R3HB trimer
分子名称: (1R)-3-{[(1R)-3-METHOXY-1-METHYL-3-OXOPROPYL]OXY}-1-METHYL-3-OXOPROPYL (3R)-3-HYDROXYBUTANOATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, PHB depolymerase
著者Hisano, T, Kasuya, K, Saito, T, Iwata, T, Miki, K.
登録日2005-11-30
公開日2006-01-31
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献The Crystal Structure of Polyhydroxybutyrate Depolymerase from Penicillium funiculosum Provides Insights into the Recognition and Degradation of Biopolyesters
J.Mol.Biol., 356, 2006
2D7T
DownloadVisualize
BU of 2d7t by Molmil
Crystal structure of human anti polyhydroxybutyrate antibody Fv
分子名称: anti polyhydroxybutyrate antibody Fv, heavy chain, light chain
著者Watanabe, H.
登録日2005-11-29
公開日2006-12-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A human antibody fragment with high affinity for the biodegradable polymer film
To be Published
2D80
DownloadVisualize
BU of 2d80 by Molmil
Crystal structure of PHB depolymerase from Penicillium funiculosum
分子名称: PHB depolymerase, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Hisano, T, Kasuya, K, Saito, T, Iwata, T, Miki, K.
登録日2005-11-30
公開日2006-01-31
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The Crystal Structure of Polyhydroxybutyrate Depolymerase from Penicillium funiculosum Provides Insights into the Recognition and Degradation of Biopolyesters
J.Mol.Biol., 356, 2006

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon