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8WT1
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BU of 8wt1 by Molmil
Crystal structure of S9 carboxypeptidase from Geobacillus sterothermophilus
分子名称: ALANINE, CITRATE ANION, GLYCEROL, ...
著者Chandravanshi, K, Kumar, A, Sen, C, Singh, R, Bhange, G.B, Makde, R.D.
登録日2023-10-17
公開日2024-03-13
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure and solution scattering of Geobacillus stearothermophilus S9 peptidase reveal structural adaptations for carboxypeptidase activity.
Febs Lett., 598, 2024
7YH4
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BU of 7yh4 by Molmil
Crystal structure of human cytosolic beta-alanyl lysine dipeptidase (PM20D2)
分子名称: Xaa-Arg dipeptidase, ZINC ION
著者Chandravanshi, K, Gaur, N.K, Kumar, A, Makde, R.D.
登録日2022-07-12
公開日2023-08-02
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Crystal structure of human cytosolic beta-alanyl lysine dipeptidase (PM20D2)
To Be Published
4JDR
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BU of 4jdr by Molmil
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase from escherichia coli
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Dihydrolipoyl dehydrogenase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Chandrasekhar, K, Arjunan, P, Furey, W.
登録日2013-02-25
公開日2013-04-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Insight to the Interaction of the Dihydrolipoamide Acetyltransferase (E2) Core with the Peripheral Components in the Escherichia coli Pyruvate Dehydrogenase Complex via Multifaceted Structural Approaches.
J.Biol.Chem., 288, 2013
1QC9
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BU of 1qc9 by Molmil
THE CRYSTALLOGRAPHIC STRUCTURE OF RESTRICTION ENDONUCLEASE ECO RI AT 3.3 A IN THE ABSENSE OF DNA
分子名称: PROTEIN (ECO RI ENDONUCLEASE)
著者Chandrasekhar, K, Horvath, M.M, Samudzi, C, Choi, J, Rosenberg, J.M.
登録日1999-05-18
公開日1999-06-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The 3.3 A Crystallographic Structure of Restriction Endonuclease Eco RI in the Absence of DNA
To be Published
4N72
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BU of 4n72 by Molmil
Catalytic domain from dihydrolipoamide acetyltransferase of pyruvate dehydrogenase from Escherichia coli
分子名称: Pyruvate dehydrogenase (Dihydrolipoyltransacetylase component)
著者Chandrasekhar, K, Arjunan, P, Furey, W.
登録日2013-10-14
公開日2014-04-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure and Function of the Catalytic Domain of the Dihydrolipoyl Acetyltransferase Component in Escherichia coli Pyruvate Dehydrogenase Complex.
J.Biol.Chem., 289, 2014
2G67
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BU of 2g67 by Molmil
E. Coli Pyruvate Dehydrogenase E1 Component (Apoenzyme)
分子名称: Pyruvate dehydrogenase E1 component
著者Furey, W, Chandrasekhar, K, Arjunan, P.
登録日2006-02-24
公開日2006-09-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Active-site changes in the pyruvate dehydrogenase multienzyme complex E1 apoenzyme component from Escherichia coli observed at 2.32 A resolution.
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
2MWQ
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BU of 2mwq by Molmil
Solution structure of PsbQ from spinacia oleracea
分子名称: Oxygen-evolving enhancer protein 3, chloroplastic
著者Rathner, P, Mueller, N, Wimmer, R, Chandra, K.
登録日2014-11-19
公開日2015-07-29
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution NMR and molecular dynamics reveal a persistent alpha helix within the dynamic region of PsbQ from photosystem II of higher plants.
Proteins, 83, 2015
5VK2
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BU of 5vk2 by Molmil
Structural basis for antibody-mediated neutralization of Lassa virus
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Hastie, K.M, Zandonatti, M.A, Kleinfelter, L.M, Rowland, M.L, Rowland, M.M, Chandra, K, Branco, L.M, Robinson, J.E, Garry, R.F, Saphire, E.O.
登録日2017-04-20
公開日2017-05-31
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.201 Å)
主引用文献Structural basis for antibody-mediated neutralization of Lassa virus.
Science, 356, 2017
4G2K
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BU of 4g2k by Molmil
Crystal structure of the Marburg Virus GP2 ectodomain in its post-fusion conformation
分子名称: CHLORIDE ION, GLYCEROL, General control protein GCN4, ...
著者Malashkevich, V.N, Koellhoffer, J.F, Harrison, J.S, Toro, R, Bhosle, R.C, Chandran, K, Lai, J.R, Almo, S.C.
登録日2012-07-12
公開日2012-09-12
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of the Marburg Virus GP2 Core Domain in Its Postfusion Conformation.
Biochemistry, 51, 2012
2G28
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BU of 2g28 by Molmil
E. Coli Pyruvate Dehydrogenase H407A variant Phosphonolactylthiamin Diphosphate Complex
分子名称: 3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-2-{(1S)-1-HYDROXY-1-[(R)-HYDROXY(METHOXY)PHOSPHORYL]ETHYL}-5-(2-{[(S)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-4-METHYL-1,3-THIAZOL-3-IUM, MAGNESIUM ION, Pyruvate dehydrogenase E1 component
著者Furey, W, Arjunan, P, Chandrasekhar, K.
登録日2006-02-15
公開日2006-04-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献A Thiamin-bound, Pre-decarboxylation Reaction Intermediate Analogue in the Pyruvate Dehydrogenase E1 Subunit Induces Large Scale Disorder-to-Order Transformations in the Enzyme and Reveals Novel Structural Features in the Covalently Bound Adduct.
J.Biol.Chem., 281, 2006
2G25
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BU of 2g25 by Molmil
E. Coli Pyruvate Dehydrogenase Phosphonolactylthiamin Diphosphate Complex
分子名称: 3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-2-{(1S)-1-HYDROXY-1-[(R)-HYDROXY(METHOXY)PHOSPHORYL]ETHYL}-5-(2-{[(S)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-4-METHYL-1,3-THIAZOL-3-IUM, MAGNESIUM ION, PHOSPHATE ION, ...
著者Furey, W, Arjunan, P, Chandrasekhar, K.
登録日2006-02-15
公開日2006-04-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A Thiamin-bound, Pre-decarboxylation Reaction Intermediate Analogue in the Pyruvate Dehydrogenase E1 Subunit Induces Large Scale Disorder-to-Order Transformations in the Enzyme and Reveals Novel Structural Features in the Covalently Bound Adduct.
J.Biol.Chem., 281, 2006
1RP7
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BU of 1rp7 by Molmil
E. COLI PYRUVATE DEHYDROGENASE INHIBITOR COMPLEX
分子名称: 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, MAGNESIUM ION, Pyruvate dehydrogenase E1 component
著者Arjunan, P, Chandrasekhar, K, Furey, W.
登録日2003-12-03
公開日2004-03-16
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Structural Determinants of Enzyme Binding Affinity: The E1 Component of Pyruvate Dehydrogenase from Escherichia coli in Complex with the Inhibitor Thiamin Thiazolone Diphosphate.
Biochemistry, 43, 2004
6IRU
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BU of 6iru by Molmil
Crystal structure of Peptidase E from Deinococcus radiodurans in P6422 space group
分子名称: peptidase DR_1070
著者Yadav, P, Chandravanshi, K, Kumar, A, Makde, R.D.
登録日2018-11-14
公開日2019-11-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Catalytic triad heterogeneity in S51 peptidase family: Structural basis for functional variability.
Proteins, 87, 2019
4FD9
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BU of 4fd9 by Molmil
Crystal structure of the third beta-gamma-crystallin domain of Crybg3 (betagamma-crystallin domain-containing protein 3) from Mus musculus
分子名称: Beta/gamma crystallin domain-containing protein 3
著者Aravind, P, Srivastava, S.S, Sankaranarayanan, R.
登録日2012-05-26
公開日2013-04-10
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Aggregation-prone near-native intermediate formation during unfolding of a structurally similar nonlenticular beta/gamma-crystallin domain
Biochemistry, 51, 2012
6LDH
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BU of 6ldh by Molmil
REFINED CRYSTAL STRUCTURE OF DOGFISH M4 APO-LACTATE DEHYDROGENASE
分子名称: M4 APO-LACTATE DEHYDROGENASE, SULFATE ION
著者Abad-Zapatero, C, Rossmann, M.G.
登録日1987-11-25
公開日1989-07-12
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Refined crystal structure of dogfish M4 apo-lactate dehydrogenase.
J.Mol.Biol., 198, 1987
4N21
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BU of 4n21 by Molmil
Crystal structure of the GP2 Core Domain from the California Academy of Science Virus
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, GP2 Ectodomain
著者Malashkevich, V.N, Koellhoffer, J.F, Dai, Z, Toro, R, Lai, J.R, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
登録日2013-10-04
公開日2013-11-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structural Characterization of the Glycoprotein GP2 Core Domain from the CAS Virus, a Novel Arenavirus-Like Species.
J.Mol.Biol., 426, 2014
6ZJM
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BU of 6zjm by Molmil
Atomic model of Andes virus glycoprotein spike tetramer generated by fitting into a Tula virus reconstruction
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope polyprotein,Envelope polyprotein,Envelope polyprotein,Envelope polyprotein,Envelope polyprotein,Envelope polyprotein,Envelope polyprotein,Envelope polyprotein,Envelope polyprotein, ...
著者Stass, R, Huiskonen, J.T, Rey, F, Guardado-Calvo, P.
登録日2020-06-29
公開日2020-10-14
最終更新日2020-10-28
実験手法ELECTRON MICROSCOPY (11.4 Å)
主引用文献The Hantavirus Surface Glycoprotein Lattice and Its Fusion Control Mechanism.
Cell, 183, 2020
6MAM
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BU of 6mam by Molmil
Cleaved Ebola GP in complex with a broadly neutralizing human antibody, ADI-15946
分子名称: ADI-15946 Fab Heavy Chain, ADI-15946 Fab Light Chain, Envelope glycoprotein, ...
著者West, B.R, Moyer, C.L, Fusco, M.L, Saphire, E.O.
登録日2018-08-28
公開日2019-03-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (4.1 Å)
主引用文献Structural basis of broad ebolavirus neutralization by a human survivor antibody.
Nat. Struct. Mol. Biol., 26, 2019
3LDH
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A comparison of the structures of apo dogfish m4 lactate dehydrogenase and its ternary complexes
分子名称: LACTATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PYRUVIC ACID
著者White, J.L, Hackert, M.L, Buehner, M, Adams, M.J, Ford, G.C, Lentzjunior, P.J, Smiley, I.E, Steindel, S.J, Rossmann, M.G.
登録日1974-06-06
公開日1977-04-29
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献A comparison of the structures of apo dogfish M4 lactate dehydrogenase and its ternary complexes.
J.Mol.Biol., 102, 1976
6X6P
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BU of 6x6p by Molmil
Characterization of the SARS-CoV-2 S Protein: Biophysical, Biochemical, Structural, and Antigenic Analysis
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Herrera, N.G, Morano, N.C, Celikgil, A, Georgiev, G.I, Malonis, R, Lee, J.H, Tong, K, Vergnolle, O, Massimi, A, Yen, L.Y, Noble, A.J, Kopylov, M, Bonanno, J.B, Garrett-Thompson, S.C, Hayes, D.B, Brenowitz, M, Garforth, S.J, Eng, E.T, Lai, J.R, Almo, S.C.
登録日2020-05-28
公開日2020-06-10
最終更新日2021-01-27
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献Characterization of the SARS-CoV-2 S Protein: Biophysical, Biochemical, Structural, and Antigenic Analysis.
Biorxiv, 2020
6VKF
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BU of 6vkf by Molmil
CCHFV GP38 (IbAr10200)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GP38
著者Mishra, A.K, McLellan, J.S.
登録日2020-01-20
公開日2020-02-05
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.524 Å)
主引用文献Structure and Characterization of Crimean-Congo Hemorrhagic Fever Virus GP38.
J.Virol., 94, 2020
8LDH
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REFINED CRYSTAL STRUCTURE OF DOGFISH M4 APO-LACTATE DEHYDROGENASE
分子名称: CITRIC ACID, M4 APO-LACTATE DEHYDROGENASE
著者Abad-Zapatero, C, Rossmann, M.G.
登録日1988-01-04
公開日1989-07-12
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Refined crystal structure of dogfish M4 apo-lactate dehydrogenase.
J.Mol.Biol., 198, 1987
3LQ2
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BU of 3lq2 by Molmil
E. coli pyruvate dehydrogenase complex E1 E235A mutant with low TDP concentration
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, MAGNESIUM ION, PHOSPHATE ION, ...
著者Furey, W.
登録日2010-02-08
公開日2010-03-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Communication between thiamin cofactors in the Escherichia coli pyruvate dehydrogenase complex E1 component active centers: evidence for a "direct pathway" between the 4'-aminopyrimidine N1' atoms.
J.Biol.Chem., 285, 2010
3LQ4
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BU of 3lq4 by Molmil
E. coli pyruvate dehydrogenase complex E1 E235A mutant with high TDP concentration
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, MAGNESIUM ION, PHOSPHATE ION, ...
著者Furey, W.
登録日2010-02-08
公開日2010-03-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Communication between thiamin cofactors in the Escherichia coli pyruvate dehydrogenase complex E1 component active centers: evidence for a "direct pathway" between the 4'-aminopyrimidine N1' atoms.
J.Biol.Chem., 285, 2010
1XOB
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BU of 1xob by Molmil
THIOREDOXIN (REDUCED DITHIO FORM), NMR, 20 STRUCTURES
分子名称: THIOREDOXIN
著者Jeng, M.-F, Campbell, A.P, Begley, T, Holmgren, A, Case, D.A, Wright, P.E, Dyson, H.J.
登録日1995-11-28
公開日1996-06-10
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献High-resolution solution structures of oxidized and reduced Escherichia coli thioredoxin.
Structure, 2, 1994

 

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