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8Q04
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BU of 8q04 by Molmil
Chlorella sorokiniana Rubisco: D4 symmetry imposed
分子名称: Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase small subunit, chloroplastic
著者Barrett, J, Blaza, J.N, Mackinder, L.C.M.
登録日2023-07-27
公開日2024-08-07
実験手法ELECTRON MICROSCOPY (2.39 Å)
主引用文献A promiscuous mechanism to phase separate eukaryotic carbon fixation
To Be Published
8Q05
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BU of 8q05 by Molmil
Chlorella sorokiniana Rubisco with CsLinker (alpha3-alpha4) bound: D4 symmetry expanded
分子名称: CsLinker (alpha3-alpha4), Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase small subunit, ...
著者Barrett, J, Blaza, J.N, Mackinder, L.C.M.
登録日2023-07-27
公開日2024-08-07
実験手法ELECTRON MICROSCOPY (2.77 Å)
主引用文献A promiscuous mechanism to phase separate eukaryotic carbon fixation
To Be Published
3FZD
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BU of 3fzd by Molmil
Mutation of Asn28 disrupts the enzymatic activity and dimerization of SARS 3CLpro
分子名称: 3C-like proteinase
著者Barrila, J, Gabelli, S, Bacha, U, Amzel, L.M, Freire, E.
登録日2009-01-25
公開日2010-05-05
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Mutation of Asn28 disrupts the dimerization and enzymatic activity of SARS 3CL(pro) .
Biochemistry, 49, 2010
7Y72
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BU of 7y72 by Molmil
SARS-CoV-2 spike glycoprotein trimer complexed with Fab fragment of anti-RBD antibody E7 (focused refinement on Fab-RBD interface)
分子名称: Fab E7 heavy chain, Fab E7 light chain, Spike glycoprotein
著者Chia, W.N, Tan, C.W, Tan, A.W.K, Young, B, Starr, T.N, Lopez, E, Fibriansah, G, Barr, J, Cheng, S, Yeoh, A.Y.Y, Yap, W.C, Lim, B.L, Ng, T.S, Sia, W.R, Zhu, F, Chen, S, Zhang, J, Greaney, A.J, Chen, M, Au, G.G, Paradkar, P, Peiris, M, Chung, A.W, Bloom, J.D, Lye, D, Lok, S.M, Wang, L.F.
登録日2022-06-21
公開日2023-08-02
最終更新日2023-08-09
実験手法ELECTRON MICROSCOPY (4.03 Å)
主引用文献Potent pan huACE2-dependent sarbecovirus neutralizing monoclonal antibodies isolated from a BNT162b2-vaccinated SARS survivor.
Sci Adv, 9, 2023
7Y71
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BU of 7y71 by Molmil
SARS-CoV-2 spike glycoprotein trimer complexed with Fab fragment of anti-RBD antibody E7
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab E7 heavy chain, ...
著者Chia, W.N, Tan, C.W, Tan, A.W.K, Young, B, Starr, T.N, Lopez, E, Fibriansah, G, Barr, J, Cheng, S, Yeoh, A.Y.Y, Yap, W.C, Lim, B.L, Ng, T.S, Sia, W.R, Zhu, F, Chen, S, Zhang, J, Greaney, A.J, Chen, M, Au, G.G, Paradkar, P, Peiris, M, Chung, A.W, Bloom, J.D, Lye, D, Lok, S.M, Wang, L.F.
登録日2022-06-21
公開日2023-08-02
最終更新日2023-08-09
実験手法ELECTRON MICROSCOPY (3.12 Å)
主引用文献Potent pan huACE2-dependent sarbecovirus neutralizing monoclonal antibodies isolated from a BNT162b2-vaccinated SARS survivor.
Sci Adv, 9, 2023
4V69
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BU of 4v69 by Molmil
Ternary complex-bound E.coli 70S ribosome.
分子名称: 16S rRNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Villa, E, Sengupta, J, Trabuco, L.G, LeBarron, J, Baxter, W.T, Shaikh, T.R, Grassucci, R.A, Nissen, P, Ehrenberg, M, Schulten, K, Frank, J.
登録日2008-12-11
公開日2014-07-09
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (6.7 Å)
主引用文献Ribosome-induced changes in elongation factor Tu conformation control GTP hydrolysis
Proc.Natl.Acad.Sci.USA, 106, 2009
5K0W
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BU of 5k0w by Molmil
Crystal structure of the metallo-beta-lactamase GOB-18 from Elizabethkingia meningoseptica
分子名称: CHLORIDE ION, Class B carbapenemase GOB-18, GLYCEROL, ...
著者Buschiazzo, A, Larrieux, N, Vila, A.J, Lisa, M.N, Moran-Barrio, J.
登録日2016-05-17
公開日2016-08-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Crystal Structure of the Metallo-beta-Lactamase GOB in the Periplasmic Dizinc Form Reveals an Unusual Metal Site.
Antimicrob.Agents Chemother., 60, 2016
4UPD
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BU of 4upd by Molmil
Open conformation of O. piceae sterol esterase mutant I544W
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, STEROL ESTERASE, TRIETHYLENE GLYCOL, ...
著者Gutierrez-Fernandez, J, Vaquero, M.E, Prieto, A, Barriuso, J, Gonzalez, M.J, Hermoso, J.A.
登録日2014-06-16
公開日2014-09-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structures of Ophiostoma Piceae Sterol Esterase: Structural Insights Into Activation Mechanism and Product Release.
J.Struct.Biol., 187, 2014
3DG4
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BU of 3dg4 by Molmil
Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of RF1-bound termination complex
分子名称: 16S Ribosomal RNA from E. coli, 23S RibosomaL RNA from E. coli
著者Gao, H, LeBarron, J, Frank, J.
登録日2008-06-12
公開日2009-02-03
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (12.8 Å)
主引用文献Ribosomal Dynamics: Intrinsic Instability of a Moleculaar Machine
To be published
3DG0
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BU of 3dg0 by Molmil
Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of EF-G-bound translocation complex
分子名称: 16S Ribosomal RNA from E. coli, 23S Ribosomal RNA from E. coli
著者Gao, H, LeBarron, J, Frank, J.
登録日2008-06-12
公開日2009-02-03
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (10.8 Å)
主引用文献Ribosomal Dynamics: Intrinsic Instability of a Moleculaar Machine
To be published
1TW9
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BU of 1tw9 by Molmil
Glutathione Transferase-2, apo form, from the nematode Heligmosomoides polygyrus
分子名称: glutathione S-transferase 2
著者Schuller, D.J, Liu, Q, Kriksunov, I.A, Campbell, A.M, Barrett, J, Brophy, P.M, Hao, Q.
登録日2004-06-30
公開日2004-08-03
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Crystal structure of a new class of glutathione transferase from the model human hookworm nematode Heligmosomoides polygyrus.
Proteins, 61, 2005
3DG2
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BU of 3dg2 by Molmil
Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of a pretranslocation complex
分子名称: 16S Ribosomal RNA from E. coli, 23S Ribosomal RNA from E. coli
著者Gao, H, LeBarron, J, Frank, J.
登録日2008-06-12
公開日2009-02-03
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (10 Å)
主引用文献Ribosomal Dynamics: Intrinsic Instability of a Moleculaar Machine
To be published
3DG5
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BU of 3dg5 by Molmil
Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of RF3-bound termination complex
分子名称: 16S Ribosomal RNA from E. coli, 23S Ribosomal RNA from E. coli
著者Gao, H, LeBarron, J, Frank, J.
登録日2008-06-12
公開日2009-02-03
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (15.5 Å)
主引用文献Ribosomal Dynamics: Intrinsic Instability of a Moleculaar Machine
To be published
1JYF
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BU of 1jyf by Molmil
Structure of the Dimeric Lac Repressor with an 11-residue C-terminal Deletion.
分子名称: GLYCEROL, Lactose Operon Repressor
著者Bell, C.E, Barry, J, Matthews, K.S, Lewis, M.
登録日2001-09-12
公開日2001-10-18
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of a variant of lac repressor with increased thermostability and decreased affinity for operator.
J.Mol.Biol., 313, 2001
1JYE
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BU of 1jye by Molmil
Structure of a Dimeric Lac Repressor with C-terminal Deletion and K84L Substitution
分子名称: GLYCEROL, Lactose Operon Repressor
著者Bell, C.E, Barry, J, Matthews, K.S, Lewis, M.
登録日2001-09-12
公開日2001-10-18
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of a variant of lac repressor with increased thermostability and decreased affinity for operator.
J.Mol.Biol., 313, 2001
4BE4
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BU of 4be4 by Molmil
Closed conformation of O. piceae sterol esterase
分子名称: 1,4-DIETHYLENE DIOXIDE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Gutierrez-Fernandez, J, Vaquero, M.E, Prieto, A, Barriuso, J, Gonzalez, M.J, Hermoso, J.A.
登録日2013-03-05
公開日2014-03-19
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structures of Ophiostoma Piceae Sterol Esterase: Structural Insights Into Activation Mechanism and Product Release.
J.Struct.Biol., 187, 2014
4BE9
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BU of 4be9 by Molmil
Open conformation of O. piceae sterol esterase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Gutierrez-Fernandez, J, Vaquero, M.E, Prieto, A, Barriuso, J, Gonzalez, M.J, Hermoso, J.A.
登録日2013-03-06
公開日2014-03-26
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structures of Ophiostoma Piceae Sterol Esterase: Structural Insights Into Activation Mechanism and Product Release.
J.Struct.Biol., 187, 2014
1ZL9
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BU of 1zl9 by Molmil
Crystal Structure of a major nematode C.elegans specific GST (CE01613)
分子名称: GLUTATHIONE, glutathione S-transferase 5
著者Kriksunov, I.A, Liu, Q, Schuller, D.J, Campbell, A.M, Barrett, J, Brophy, P.M, Hao, Q.
登録日2005-05-05
公開日2005-05-17
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Crystal structure of a major nematode C.elegans specific GST (CE01613)
To be Published
3D62
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BU of 3d62 by Molmil
Development of Broad-Spectrum Halomethyl Ketone Inhibitors Against Coronavirus Main Protease 3CLpro
分子名称: 3C-like proteinase, benzyl (2-oxopropyl)carbamate
著者Bacha, U, Barrila, J, Gabelli, S.B, Kiso, Y, Amzel, L.M, Freire, E.
登録日2008-05-18
公開日2008-07-01
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Development of broad-spectrum halomethyl ketone inhibitors against coronavirus main protease 3CL(pro).
Chem.Biol.Drug Des., 72, 2008
6G0Y
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BU of 6g0y by Molmil
X-ray structure of M-21 protein complex
分子名称: Matrix M2-1, Phosphoprotein, ZINC ION
著者Edwards, T.A, Barr, J.
登録日2018-03-20
公開日2018-11-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献The Structure of the Human Respiratory Syncytial Virus M2-1 Protein Bound to the Interaction Domain of the Phosphoprotein P Defines the Orientation of the Complex.
Mbio, 9, 2018
4W8P
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BU of 4w8p by Molmil
Crystal structure of RIAM TBS1 in complex with talin R7R8 domains
分子名称: 1,2-ETHANEDIOL, Amyloid beta A4 precursor protein-binding family B member 1-interacting protein, Talin-1
著者Chang, Y.C.E, Zhang, H, Wu, J.
登録日2014-08-25
公開日2014-12-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural and Mechanistic Insights into the Recruitment of Talin by RIAM in Integrin Signaling.
Structure, 22, 2014
7OO5
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BU of 7oo5 by Molmil
Crystal structure of the lignin peroxidase (ApeLiP) from Agrocybe pediades
分子名称: CALCIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ZINC ION, ...
著者Romero, A, Ruiz-Duenas, F.J.
登録日2021-05-26
公開日2021-10-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Agaricales Mushroom Lignin Peroxidase: From Structure-Function to Degradative Capabilities.
Antioxidants, 10, 2021
4WLM
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BU of 4wlm by Molmil
Crystal structure of mouse Xyloside xylosyltransferase 1 complexed with manganese
分子名称: MANGANESE (II) ION, SULFATE ION, Xyloside xylosyltransferase 1
著者Yu, H, Li, H.
登録日2014-10-07
公開日2015-09-30
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Notch-modifying xylosyltransferase structures support an SNi-like retaining mechanism.
Nat.Chem.Biol., 11, 2015
4WLG
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BU of 4wlg by Molmil
crystal structure of mouse Xyloside xylosyltransferase 1, apo form
分子名称: SULFATE ION, Xyloside xylosyltransferase 1
著者Yu, H, Li, H.
登録日2014-10-07
公開日2015-11-04
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Notch-modifying xylosyltransferase structures support an SNi-like retaining mechanism.
Nat.Chem.Biol., 11, 2015
4WMB
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BU of 4wmb by Molmil
crystal structure of mouse Xyloside xylosyltransferase 1 complexed with manganese, acceptor ligand and UDP
分子名称: Coagulation factor IX, MANGANESE (II) ION, SULFATE ION, ...
著者Yu, H, Li, H.
登録日2014-10-08
公開日2015-09-30
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Notch-modifying xylosyltransferase structures support an SNi-like retaining mechanism.
Nat.Chem.Biol., 11, 2015

 

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