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9BUX
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BU of 9bux by Molmil
Structure of GGCX-BGP-menaquinone-4 epoxide complex
分子名称: (1aR,7aS)-1a-methyl-7a-[(2E,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraen-1-yl]-1a,7a-dihydronaphtho[2,3-b]oxirene-2,7-dione, (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Wang, R, Qi, X.
登録日2024-05-17
公開日2025-01-29
最終更新日2025-03-26
実験手法ELECTRON MICROSCOPY (3.06 Å)
主引用文献Structure and mechanism of vitamin-K-dependent gamma-glutamyl carboxylase.
Nature, 639, 2025
9BUR
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BU of 9bur by Molmil
Structure of GGCX-BGP complex
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Wang, R, Qi, X.
登録日2024-05-17
公開日2025-01-29
最終更新日2025-03-26
実験手法ELECTRON MICROSCOPY (2.95 Å)
主引用文献Structure and mechanism of vitamin-K-dependent gamma-glutamyl carboxylase.
Nature, 639, 2025
7YKJ
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BU of 7ykj by Molmil
Omicron RBDs bound with P3E6 Fab (one up and one down)
分子名称: P3E6 heavy chain, P3E6 light chain, Spike glycoprotein
著者Tang, B, Dang, S.
登録日2022-07-22
公開日2022-12-28
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural insights into broadly neutralizing antibodies elicited by hybrid immunity against SARS-CoV-2.
Emerg Microbes Infect, 12, 2023
8H5U
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BU of 8h5u by Molmil
Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with neutralizing nanobody Nb-021
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody Nb-021, ...
著者Yang, J, Lin, S, Lu, G.W.
登録日2022-10-13
公開日2023-10-18
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Development of a bispecific nanobody conjugate broadly neutralizes diverse SARS-CoV-2 variants and structural basis for its broad neutralization.
Plos Pathog., 19, 2023
8H5T
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BU of 8h5t by Molmil
Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with neutralizing nanobody Nb-015
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody Nb-015, Spike protein S1
著者Yang, J, Lin, S, Lu, G.W.
登録日2022-10-13
公開日2023-10-18
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Development of a bispecific nanobody conjugate broadly neutralizes diverse SARS-CoV-2 variants and structural basis for its broad neutralization.
Plos Pathog., 19, 2023
8K19
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BU of 8k19 by Molmil
Neutralization antibody ZCP3B4 bound with SARS-CoV-2 Omicron BA.5 RBD
分子名称: Spike protein S1, ZCP3B4 heavy chain, ZCP3B4 light chain
著者Tang, B, Dang, S.
登録日2023-07-10
公開日2024-10-09
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (3.88 Å)
主引用文献Ultrapotent class I neutralizing antibodies post Omicron breakthrough infection overcome broad SARS-CoV-2 escape variants.
Ebiomedicine, 108, 2024
7YHH
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BU of 7yhh by Molmil
Solution structure of S-di-mannosylated S3C mutant of carbohydrate binding module (CBM) of the glycoside hydrolase Family 7 cellobiohydrolase from Trichoderma reesei
分子名称: Exoglucanase 1, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose
著者Chen, C, Feng, Y, Tan, Z.
登録日2022-07-13
公開日2023-07-19
最終更新日2024-11-20
実験手法SOLUTION NMR
主引用文献Structural insight into why S-linked glycosylation cannot adequately mimic the role of natural O-glycosylation.
Int.J.Biol.Macromol., 253, 2023
7YHG
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BU of 7yhg by Molmil
Solution structure of S-mono-mannosylated S3C mutant of carbohydrate binding module (CBM) of the glycoside hydrolase Family 7 cellobiohydrolase from Trichoderma reesei
分子名称: Exoglucanase 1, alpha-D-mannopyranose
著者Chen, C, Feng, Y, Tan, Z.
登録日2022-07-13
公開日2023-07-19
最終更新日2024-10-09
実験手法SOLUTION NMR
主引用文献Structural insight into why S-linked glycosylation cannot adequately mimic the role of natural O-glycosylation.
Int.J.Biol.Macromol., 253, 2023
7YHF
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BU of 7yhf by Molmil
Solution structure of S3C mutant of carbohydrate binding module (CBM) of the glycoside hydrolase Family 7 cellobiohydrolase from Trichoderma reesei
分子名称: Exoglucanase 1
著者Chen, C, Feng, Y, Tan, Z.
登録日2022-07-13
公開日2023-07-19
最終更新日2024-10-30
実験手法SOLUTION NMR
主引用文献Structural insight into why S-linked glycosylation cannot adequately mimic the role of natural O-glycosylation.
Int.J.Biol.Macromol., 253, 2023
7YHI
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BU of 7yhi by Molmil
Solution structure of O-di-mannosylated carbohydrate binding module (CBM) of the glycoside hydrolase Family 7 cellobiohydrolase from Trichoderma reesei
分子名称: Exoglucanase 1, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose
著者Chen, C, Feng, Y, Tan, Z.
登録日2022-07-13
公開日2023-07-19
最終更新日2024-11-13
実験手法SOLUTION NMR
主引用文献Structural insight into why S-linked glycosylation cannot adequately mimic the role of natural O-glycosylation.
Int.J.Biol.Macromol., 253, 2023
8W8G
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BU of 8w8g by Molmil
Crystal structure of human TRF1 with PinX1
分子名称: HEXANE-1,6-DIOL, PIN2/TERF1-interacting telomerase inhibitor 1, Telomeric repeat-binding factor 1
著者Lei, M, Wu, J.
登録日2023-09-02
公開日2024-09-04
最終更新日2025-03-19
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献PinX1 suppresses cancer progression by inhibiting telomerase activity in cervical squamous cell carcinoma and endocervical adenocarcinoma.
Genes Dis, 12, 2025
7N64
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BU of 7n64 by Molmil
SARS-CoV-2 Spike (2P) in complex with G32R7 Fab (RBD and NTD local reconstruction)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, G32R7 Fab heavy chain, ...
著者Windsor, I.W, Jenni, S, Tong, P, Gautam, A.K, Wesemann, D.R, Harrison, S.C.
登録日2021-06-07
公開日2021-08-04
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Memory B cell repertoire for recognition of evolving SARS-CoV-2 spike.
Biorxiv, 2021
7N62
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BU of 7n62 by Molmil
SARS-CoV-2 Spike (2P) in complex with C12C9 Fab (NTD local reconstruction)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, C12C9 Fab heavy chain, C12C9 Fab light chain, ...
著者Windsor, I.W, Jenni, S, Bajic, G, Tong, P, Gautam, A.K, Wesemann, D.R, Harrison, S.C.
登録日2021-06-07
公開日2021-08-04
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Memory B cell repertoire for recognition of evolving SARS-CoV-2 spike.
Biorxiv, 2021
7XH8
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BU of 7xh8 by Molmil
The structure of ZCB11 Fab against SARS-CoV-2 Omicron Spike
分子名称: Spike glycoprotein, The heavy chain of ZCB11 antibody, The light chain of ZCB11 antibody
著者Hang, L, Dang, S.
登録日2022-04-07
公開日2022-06-29
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (2.99 Å)
主引用文献A broadly neutralizing antibody protects Syrian hamsters against SARS-CoV-2 Omicron challenge.
Nat Commun, 13, 2022
7Y1F
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BU of 7y1f by Molmil
Cryo-EM structure of human k-opioid receptor-Gi complex
分子名称: Dynorphin, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Chen, B.O, Xu, F.E.
登録日2022-06-08
公開日2023-05-24
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cryo-EM structure of human kappa-opioid receptor-Gi complex bound to an endogenous agonist dynorphin A.
Protein Cell, 14, 2023
7W1S
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BU of 7w1s by Molmil
Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with neutralizing nanobody Nb-007
分子名称: Nanobody Nb-007, Spike protein S1
著者Yang, J, Lin, S, Sun, H.L, Lu, G.W.
登録日2021-11-20
公開日2022-06-29
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.997 Å)
主引用文献A Potent Neutralizing Nanobody Targeting the Spike Receptor-Binding Domain of SARS-CoV-2 and the Structural Basis of Its Intimate Binding.
Front Immunol, 13, 2022
7DK0
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BU of 7dk0 by Molmil
Crystal structure of SARS-CoV-2 Spike RBD in complex with MW05 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, MW05 heavy chain, MW05 light chain, ...
著者Wang, J, Jiao, S, Wang, R, Zhang, J, Zhang, M, Wang, M.
登録日2020-11-22
公開日2021-06-09
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (3.199 Å)
主引用文献Antibody-dependent enhancement (ADE) of SARS-CoV-2 pseudoviral infection requires Fc gamma RIIB and virus-antibody complex with bivalent interaction.
Commun Biol, 5, 2022
7DJZ
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BU of 7djz by Molmil
Crystal structure of SARS-CoV-2 Spike RBD in complex with MW01 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CITRIC ACID, MW01 heavy chain, ...
著者Wang, J, Jiao, S, Wang, R, Zhang, J, Zhang, M, Wang, M.
登録日2020-11-22
公開日2021-06-09
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.397 Å)
主引用文献Antibody-dependent enhancement (ADE) of SARS-CoV-2 pseudoviral infection requires Fc gamma RIIB and virus-antibody complex with bivalent interaction.
Commun Biol, 5, 2022
9ARJ
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BU of 9arj by Molmil
CryoEM structure of BoNT-NTNH-OrfX2 complex from Clostridium botulinum E1, major class
分子名称: Botulinum neurotoxin, Peptidase M27, Toxin
著者Gao, L.
登録日2024-02-23
公開日2025-01-22
最終更新日2025-05-28
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Botulinum neurotoxins exploit host digestive proteases to boost their oral toxicity via activating OrfXs/P47.
Nat.Struct.Mol.Biol., 32, 2025
9ARK
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BU of 9ark by Molmil
CryoEM structure of BoNT-NTNH-OrfX2 complex from Clostridium botulinum E1, minor class
分子名称: Botulinum neurotoxin, Peptidase M27, Toxin
著者Gao, L.
登録日2024-02-23
公開日2025-01-22
最終更新日2025-05-28
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Botulinum neurotoxins exploit host digestive proteases to boost their oral toxicity via activating OrfXs/P47.
Nat.Struct.Mol.Biol., 32, 2025
9ARL
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BU of 9arl by Molmil
CryoEM structure of BoNT-NTNH-OrfX2 complex from Clostridium botulinum strain A1-ST7B, major class
分子名称: Botulinum neurotoxin type A, NtnH, OrfX2
著者Gao, L.
登録日2024-02-23
公開日2025-01-22
最終更新日2025-05-28
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Botulinum neurotoxins exploit host digestive proteases to boost their oral toxicity via activating OrfXs/P47.
Nat.Struct.Mol.Biol., 32, 2025
3J3Y
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BU of 3j3y by Molmil
Atomic-level structure of the entire HIV-1 capsid (186 hexamers + 12 pentamers)
分子名称: capsid protein
著者Perilla, J.R, Zhao, G, Zhang, P, Schulten, K.J.
登録日2013-05-06
公開日2013-05-29
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY
主引用文献Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics.
Nature, 497, 2013
3J4F
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BU of 3j4f by Molmil
Structure of HIV-1 capsid protein by cryo-EM
分子名称: capsid protein
著者Zhao, G, Perilla, J.R, Meng, X, Schulten, K, Zhang, P.
登録日2013-07-11
公開日2013-07-24
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (8.6 Å)
主引用文献Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics.
Nature, 497, 2013
3J3Q
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BU of 3j3q by Molmil
Atomic-level structure of the entire HIV-1 capsid
分子名称: capsid protein
著者Perilla, J.R, Zhao, G, Zhang, P, Schulten, K.J.
登録日2013-04-12
公開日2013-05-29
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY
主引用文献Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics.
Nature, 497, 2013
8XFW
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BU of 8xfw by Molmil
Crystal structure of MiCGT(M148A/V190T/S121D) in complex with UDP
分子名称: UDP-glycosyltransferase 13, URIDINE-5'-DIPHOSPHATE
著者Zhang, Z.M, Zhou, Z.Q.
登録日2023-12-14
公開日2024-12-18
最終更新日2025-07-09
実験手法X-RAY DIFFRACTION (3.10005617 Å)
主引用文献An efficient C-glycoside production platform enabled by rationally tuning the chemoselectivity of glycosyltransferases.
Nat Commun, 15, 2024

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